RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 PICALMQ13492 652 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 CCT6BQ92526 530 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 SLC4A4Q9Y6R1 1079 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 EHBP1L1Q8N3D4 1523 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 CYP7A1P22680 504 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 AFMP43652 599 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 GPATCH11Q8N954 259 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 IPO4Q8TEX9 1081 aaKnown RBP12.19□□□□□ -0.46
GABRB3-204ENST00000541819 CCDC171Q6TFL3 1326 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 EPRSP07814 1512 aaKnown RBP12.19□□□□□ -0.46
GABRB3-204ENST00000541819 PSMA7O14818 248 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 ADCY5O95622 1261 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 ASIC1P78348 528 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 PAXBP1Q9Y5B6 917 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 F8W031 263 aaPredicted RBP12.19□□□□□ -0.46
GABRB3-204ENST00000541819 RTN1Q16799 776 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 SELENOSQ9BQE4 189 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 PRDM10Q9NQV6 1147 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 SPDYE3A6NKU9 549 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 ZBTB43O43298 467 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 CRCPO75575 148 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 SSFA2P28290 1259 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 UBASH3AP57075 661 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 PRPF31Q8WWY3 499 aaKnown RBP12.19□□□□□ -0.46
GABRB3-204ENST00000541819 ZSWIM4Q9H7M6 989 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 PIK3R4Q99570 1358 aa12.19□□□□□ -0.46
GABRB3-204ENST00000541819 MAK16Q9BXY0 300 aaKnown RBP12.18□□□□□ -0.46
GABRB3-204ENST00000541819 KLF18A0A0U1RQI7 1052 aa12.18□□□□□ -0.46
GABRB3-204ENST00000541819 ZNF165P49910 485 aa12.18□□□□□ -0.46
GABRB3-204ENST00000541819 UVSSAQ2YD98 709 aa12.18□□□□□ -0.46
GABRB3-204ENST00000541819 RPUSD2Q8IZ73 545 aaKnown RBP12.18□□□□□ -0.46
GABRB3-204ENST00000541819 ZFYP08048 801 aaPredicted RBP12.18□□□□□ -0.46
GABRB3-204ENST00000541819 FLIIQ13045 1269 aa12.18□□□□□ -0.46
GABRB3-204ENST00000541819 SETDB2Q96T68 719 aa12.18□□□□□ -0.46
GABRB3-204ENST00000541819 LARP6Q9BRS8 491 aaKnown RBP12.18□□□□□ -0.46
GABRB3-204ENST00000541819 ATP5J2-PTCD1G3V325 749 aa12.18□□□□□ -0.46
GABRB3-204ENST00000541819 CAMSAP2Q08AD1 1489 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 UBE2HP62256 183 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 KIF5AQ12840 1032 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 ALG1Q9BT22 464 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 BIN2Q9UBW5 565 aaPredicted RBP12.17□□□□□ -0.46
GABRB3-204ENST00000541819 DMRT2Q9Y5R5 561 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 RRP36Q96EU6 259 aaKnown RBP12.17□□□□□ -0.46
GABRB3-204ENST00000541819 VEZTQ9HBM0 779 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 RAPGEF3O95398 923 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 RFX1P22670 979 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 CCDC110Q8TBZ0 833 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 KCNG4Q8TDN1 519 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 RTL9Q8NET4 1388 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 POLD1P28340 1107 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 JAKMIP2Q96AA8 810 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 TRERF1Q96PN7 1200 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 HAUS7Q99871 368 aa12.17□□□□□ -0.46
GABRB3-204ENST00000541819 SNRPA1P09661 255 aaKnown RBP12.16□□□□□ -0.46
GABRB3-204ENST00000541819 TERF1P54274 439 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 KRT83P78385 493 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 SSH1Q8WYL5 1049 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 GTPBP4Q9BZE4 634 aaKnown RBP12.16□□□□□ -0.46
GABRB3-204ENST00000541819 TRIM7Q9C029 511 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 ATP6V0A2Q9Y487 856 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 SEPT6Q14141 434 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 NAA16Q6N069 864 aaPredicted RBP12.16□□□□□ -0.46
GABRB3-204ENST00000541819 UBE3BQ7Z3V4 1068 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 KRT28Q7Z3Y7 464 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 WAPLQ7Z5K2 1190 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 NME9Q86XW9 330 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 PFDN4Q9NQP4 134 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 BICDL2A1A5D9 508 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 MNAT1P51948 309 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 CFTRP13569 1480 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 KRT79Q5XKE5 535 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 HS2ST1Q7LGA3 356 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 PODXL2Q9NZ53 605 aa12.16□□□□□ -0.46
GABRB3-204ENST00000541819 NKTRP30414 1462 aaKnown RBP12.15□□□□□ -0.46
GABRB3-204ENST00000541819 LMOD1P29536 600 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-204ENST00000541819 ATRIPQ8WXE1 791 aa12.15□□□□□ -0.46
GABRB3-204ENST00000541819 RNF216Q9NWF9 866 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-204ENST00000541819 RBM27Q9P2N5 1060 aaKnown RBP12.15□□□□□ -0.46
GABRB3-204ENST00000541819 PPP1R7Q15435 360 aa12.15□□□□□ -0.46
GABRB3-204ENST00000541819 NEK11Q8NG66 645 aa12.15□□□□□ -0.46
GABRB3-204ENST00000541819 NYXQ9GZU5 481 aa12.15□□□□□ -0.46
GABRB3-204ENST00000541819 IVLP07476 585 aa12.15□□□□□ -0.46
GABRB3-204ENST00000541819 RARSP54136 660 aaKnown RBP12.15□□□□□ -0.46
GABRB3-204ENST00000541819 SLC8A3P57103 927 aa12.15□□□□□ -0.46
GABRB3-204ENST00000541819 TNPO1Q92973 898 aaKnown RBP12.15□□□□□ -0.46
GABRB3-204ENST00000541819 MTRF1LQ9UGC7 380 aaKnown RBP12.15□□□□□ -0.46
GABRB3-204ENST00000541819 CCDC121Q6ZUS5 278 aa12.15□□□□□ -0.47
GABRB3-204ENST00000541819 FMNL3Q8IVF7 1028 aa12.15□□□□□ -0.47
GABRB3-204ENST00000541819 CCDC114Q96M63 670 aa12.15□□□□□ -0.47
GABRB3-204ENST00000541819 FOXO3O43524 673 aa12.14□□□□□ -0.47
GABRB3-204ENST00000541819 ARID5AQ03989 594 aa12.14□□□□□ -0.47
GABRB3-204ENST00000541819 NLRP3Q96P20 1036 aa12.14□□□□□ -0.47
GABRB3-204ENST00000541819 GDPD2Q9HCC8 539 aa12.14□□□□□ -0.47
GABRB3-204ENST00000541819 MAGEB6P1A0A0J9YX57 407 aa12.14□□□□□ -0.47
GABRB3-204ENST00000541819 PLCG2P16885 1265 aa12.14□□□□□ -0.47
GABRB3-204ENST00000541819 GEN1Q17RS7 908 aa12.14□□□□□ -0.47
GABRB3-204ENST00000541819 HECW1Q76N89 1606 aa12.14□□□□□ -0.47
GABRB3-204ENST00000541819 CCDC141Q6ZP82 1450 aa12.14□□□□□ -0.47
GABRB3-204ENST00000541819 CTAGE9A4FU28 777 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms