RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 SLC4A8Q2Y0W8 1093 aa16.84■□□□□ 0.29
GCFC2-211ENST00000541687 DHX32Q7L7V1 743 aaKnown RBP16.84■□□□□ 0.29
GCFC2-211ENST00000541687 CTAGE5O15320 804 aa16.84■□□□□ 0.29
GCFC2-211ENST00000541687 METAP2P50579 478 aaKnown RBP eCLIP16.84■□□□□ 0.29
GCFC2-211ENST00000541687 TMEM67Q5HYA8 995 aa16.84■□□□□ 0.29
GCFC2-211ENST00000541687 PPP4R3BQ5MIZ7 849 aa16.84■□□□□ 0.29
GCFC2-211ENST00000541687 AOPEPQ8N6M6 819 aa16.84■□□□□ 0.29
GCFC2-211ENST00000541687 IARSP41252 1262 aaKnown RBP16.84■□□□□ 0.29
GCFC2-211ENST00000541687 DCAF5Q96JK2 942 aa16.84■□□□□ 0.29
GCFC2-211ENST00000541687 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.84■□□□□ 0.29
GCFC2-211ENST00000541687 V9GYY5 206 aaPredicted RBP16.84■□□□□ 0.29
GCFC2-211ENST00000541687 SLC26A6Q9BXS9 759 aa16.84■□□□□ 0.29
GCFC2-211ENST00000541687 LSG1Q9H089 658 aaKnown RBP16.84■□□□□ 0.29
GCFC2-211ENST00000541687 GNL3LQ9NVN8 582 aaKnown RBP16.84■□□□□ 0.29
GCFC2-211ENST00000541687 SMTNL1A8MU46 457 aa16.83■□□□□ 0.29
GCFC2-211ENST00000541687 PRC1O43663 620 aa16.83■□□□□ 0.29
GCFC2-211ENST00000541687 SKIDA1Q1XH10 827 aa16.83■□□□□ 0.29
GCFC2-211ENST00000541687 CNNM3Q8NE01 707 aa16.83■□□□□ 0.29
GCFC2-211ENST00000541687 ERBB4Q15303 1308 aa16.83■□□□□ 0.28
GCFC2-211ENST00000541687 ADAMTS2O95450 1211 aa16.83■□□□□ 0.28
GCFC2-211ENST00000541687 MAP3K12Q12852 859 aa16.83■□□□□ 0.28
GCFC2-211ENST00000541687 PPP1R9BQ96SB3 815 aa16.83■□□□□ 0.28
GCFC2-211ENST00000541687 RANBP6O60518 1105 aaKnown RBP16.83■□□□□ 0.28
GCFC2-211ENST00000541687 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.28
GCFC2-211ENST00000541687 TMX4Q9H1E5 349 aaPredicted RBP16.83■□□□□ 0.28
GCFC2-211ENST00000541687 C19orf44Q9H6X5 657 aa16.83■□□□□ 0.28
GCFC2-211ENST00000541687 A0A1B0GUL7 405 aa16.82■□□□□ 0.28
GCFC2-211ENST00000541687 SETQ01105 290 aaPredicted RBP16.82■□□□□ 0.28
GCFC2-211ENST00000541687 CCDC70Q6NSX1 233 aa16.82■□□□□ 0.28
GCFC2-211ENST00000541687 CADPS2Q86UW7 1296 aa16.82■□□□□ 0.28
GCFC2-211ENST00000541687 SLC52A2Q9HAB3 445 aa16.82■□□□□ 0.28
GCFC2-211ENST00000541687 ARHGAP31Q2M1Z3 1444 aa16.82■□□□□ 0.28
GCFC2-211ENST00000541687 A0A1B0GVL5 298 aa16.82■□□□□ 0.28
GCFC2-211ENST00000541687 LARGE1O95461 756 aa16.82■□□□□ 0.28
GCFC2-211ENST00000541687 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
GCFC2-211ENST00000541687 SKILP12757 684 aa16.82■□□□□ 0.28
GCFC2-211ENST00000541687 LIG1P18858 919 aa16.82■□□□□ 0.28
GCFC2-211ENST00000541687 FILIP1LQ4L180 1135 aa16.82■□□□□ 0.28
GCFC2-211ENST00000541687 MTMR6Q9Y217 621 aa16.82■□□□□ 0.28
GCFC2-211ENST00000541687 A2ML1A8K2U0 1454 aa16.82■□□□□ 0.28
GCFC2-211ENST00000541687 CPLX3Q8WVH0 158 aa16.82■□□□□ 0.28
GCFC2-211ENST00000541687 IQGAP1P46940 1657 aa16.81■□□□□ 0.28
GCFC2-211ENST00000541687 KIF18AQ8NI77 898 aa16.81■□□□□ 0.28
GCFC2-211ENST00000541687 ALG1Q9BT22 464 aa16.81■□□□□ 0.28
GCFC2-211ENST00000541687 RNF113AO15541 343 aaKnown RBP16.81■□□□□ 0.28
GCFC2-211ENST00000541687 LMOD1P29536 600 aaPredicted RBP16.81■□□□□ 0.28
GCFC2-211ENST00000541687 HSPA2P54652 639 aa16.81■□□□□ 0.28
GCFC2-211ENST00000541687 PPFIBP1Q86W92 1011 aa16.81■□□□□ 0.28
GCFC2-211ENST00000541687 MRPS27Q92552 414 aaKnown RBP16.81■□□□□ 0.28
GCFC2-211ENST00000541687 ALKQ9UM73 1620 aa16.81■□□□□ 0.28
GCFC2-211ENST00000541687 IQSEC2Q5JU85 1478 aa16.81■□□□□ 0.28
GCFC2-211ENST00000541687 URI1O94763 535 aaPredicted RBP16.81■□□□□ 0.28
GCFC2-211ENST00000541687 CCDC47Q96A33 483 aaKnown RBP16.81■□□□□ 0.28
GCFC2-211ENST00000541687 HSP90B2PQ58FF3 399 aa16.8■□□□□ 0.28
GCFC2-211ENST00000541687 LEO1Q8WVC0 666 aaPredicted RBP16.8■□□□□ 0.28
GCFC2-211ENST00000541687 TSPOAP1O95153 1857 aa16.8■□□□□ 0.28
GCFC2-211ENST00000541687 PRIMPOLQ96LW4 560 aa16.8■□□□□ 0.28
GCFC2-211ENST00000541687 CFAP74Q9C0B2 1584 aa16.8■□□□□ 0.28
GCFC2-211ENST00000541687 CBFA2T2O43439 604 aa16.79■□□□□ 0.28
GCFC2-211ENST00000541687 ZMYND15Q9H091 742 aa16.79■□□□□ 0.28
GCFC2-211ENST00000541687 TOP1P11387 765 aaKnown RBP16.79■□□□□ 0.28
GCFC2-211ENST00000541687 CUL4AQ13619 759 aa16.79■□□□□ 0.28
GCFC2-211ENST00000541687 ZDHHC9Q9Y397 364 aa16.79■□□□□ 0.28
GCFC2-211ENST00000541687 SSRP1Q08945 709 aaKnown RBP16.79■□□□□ 0.28
GCFC2-211ENST00000541687 TTC6Q86TZ1 520 aa16.79■□□□□ 0.28
GCFC2-211ENST00000541687 SETBP1Q9Y6X0 1596 aa16.79■□□□□ 0.28
GCFC2-211ENST00000541687 NAP1L1P55209 391 aaKnown RBP16.79■□□□□ 0.28
GCFC2-211ENST00000541687 RGS12O14924 1447 aa16.78■□□□□ 0.28
GCFC2-211ENST00000541687 SYKP43405 635 aa16.78■□□□□ 0.28
GCFC2-211ENST00000541687 SLC5A1P13866 664 aa16.78■□□□□ 0.28
GCFC2-211ENST00000541687 PI4K2BQ8TCG2 481 aa16.78■□□□□ 0.28
GCFC2-211ENST00000541687 UBXN4Q92575 508 aa16.78■□□□□ 0.28
GCFC2-211ENST00000541687 MAPK8IP2Q13387 824 aaPredicted RBP16.78■□□□□ 0.28
GCFC2-211ENST00000541687 CEP135Q66GS9 1140 aa16.78■□□□□ 0.28
GCFC2-211ENST00000541687 ZNF589Q86UQ0 364 aaPredicted RBP16.78■□□□□ 0.28
GCFC2-211ENST00000541687 CBX8Q9HC52 389 aa16.78■□□□□ 0.28
GCFC2-211ENST00000541687 ZSWIM6Q9HCJ5 1215 aa16.78■□□□□ 0.28
GCFC2-211ENST00000541687 EYA2O00167 538 aa16.77■□□□□ 0.28
GCFC2-211ENST00000541687 ZBTB43O43298 467 aa16.77■□□□□ 0.28
GCFC2-211ENST00000541687 KBTBD3Q8NAB2 608 aa16.77■□□□□ 0.28
GCFC2-211ENST00000541687 PLBD2Q8NHP8 589 aa16.77■□□□□ 0.28
GCFC2-211ENST00000541687 WASF1Q92558 559 aa16.77■□□□□ 0.28
GCFC2-211ENST00000541687 PTPRMP28827 1452 aa16.77■□□□□ 0.28
GCFC2-211ENST00000541687 SPTLC2O15270 562 aa16.77■□□□□ 0.28
GCFC2-211ENST00000541687 TXLNAP40222 546 aa16.77■□□□□ 0.28
GCFC2-211ENST00000541687 ZHX1Q9UKY1 873 aaPredicted RBP16.77■□□□□ 0.28
GCFC2-211ENST00000541687 IGSF3O75054 1194 aa16.77■□□□□ 0.27
GCFC2-211ENST00000541687 ATP2B2Q01814 1243 aa16.77■□□□□ 0.27
GCFC2-211ENST00000541687 TTLL7Q6ZT98 887 aa16.77■□□□□ 0.27
GCFC2-211ENST00000541687 ABCA9Q8IUA7 1624 aa16.76■□□□□ 0.27
GCFC2-211ENST00000541687 EXOC5O00471 708 aa16.76■□□□□ 0.27
GCFC2-211ENST00000541687 CCP110O43303 1012 aa16.76■□□□□ 0.27
GCFC2-211ENST00000541687 MFSD6Q6ZSS7 791 aa16.76■□□□□ 0.27
GCFC2-211ENST00000541687 TM6SF1Q9BZW5 370 aa16.76■□□□□ 0.27
GCFC2-211ENST00000541687 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
GCFC2-211ENST00000541687 DHX8Q14562 1220 aaKnown RBP16.76■□□□□ 0.27
GCFC2-211ENST00000541687 ZKSCAN3Q9BRR0 538 aa16.76■□□□□ 0.27
GCFC2-211ENST00000541687 MIGA1Q8NAN2 632 aa16.76■□□□□ 0.27
GCFC2-211ENST00000541687 UBE2Q2Q8WVN8 375 aa16.76■□□□□ 0.27
GCFC2-211ENST00000541687 ZBTB9Q96C00 473 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms