RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 MTUS1Q9ULD2 1270 aa17.39■□□□□ 0.37
HMGA2-210ENST00000541363 BUB1BO60566 1050 aaPredicted RBP17.39■□□□□ 0.37
HMGA2-210ENST00000541363 PHLDB2Q86SQ0 1253 aa17.39■□□□□ 0.37
HMGA2-210ENST00000541363 HVCN1Q96D96 273 aa17.39■□□□□ 0.37
HMGA2-210ENST00000541363 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.37
HMGA2-210ENST00000541363 DACT3Q96B18 629 aaPredicted RBP17.39■□□□□ 0.37
HMGA2-210ENST00000541363 TSPY2A6NKD2 308 aa17.38■□□□□ 0.37
HMGA2-210ENST00000541363 ANKRD30BQ9BXX2 1392 aa17.38■□□□□ 0.37
HMGA2-210ENST00000541363 NBPF7P0C2Y1 421 aaPredicted RBP17.38■□□□□ 0.37
HMGA2-210ENST00000541363 PTGS1P23219 599 aa17.38■□□□□ 0.37
HMGA2-210ENST00000541363 TMEM132EQ6IEE7 984 aa17.38■□□□□ 0.37
HMGA2-210ENST00000541363 ZSCAN16Q9H4T2 348 aaPredicted RBP17.38■□□□□ 0.37
HMGA2-210ENST00000541363 TUBB4AP04350 444 aa17.38■□□□□ 0.37
HMGA2-210ENST00000541363 TSNAXIP1Q2TAA8 658 aa17.38■□□□□ 0.37
HMGA2-210ENST00000541363 IFT81Q8WYA0 676 aa17.38■□□□□ 0.37
HMGA2-210ENST00000541363 VAV2P52735 878 aa17.38■□□□□ 0.37
HMGA2-210ENST00000541363 TRAF1Q13077 416 aa17.38■□□□□ 0.37
HMGA2-210ENST00000541363 UAP1Q16222 522 aaPredicted RBP17.38■□□□□ 0.37
HMGA2-210ENST00000541363 EXOC6BQ9Y2D4 811 aa17.38■□□□□ 0.37
HMGA2-210ENST00000541363 BMP15O95972 392 aa17.37■□□□□ 0.37
HMGA2-210ENST00000541363 CSRNP2Q9H175 543 aa17.37■□□□□ 0.37
HMGA2-210ENST00000541363 TDRD9Q8NDG6 1382 aaKnown RBP17.37■□□□□ 0.37
HMGA2-210ENST00000541363 E7EVH7 732 aa17.37■□□□□ 0.37
HMGA2-210ENST00000541363 MFSD6Q6ZSS7 791 aa17.37■□□□□ 0.37
HMGA2-210ENST00000541363 PANK2Q9BZ23 570 aa17.37■□□□□ 0.37
HMGA2-210ENST00000541363 DNAI1Q9UI46 699 aa17.37■□□□□ 0.37
HMGA2-210ENST00000541363 RASA3Q14644 834 aa17.37■□□□□ 0.37
HMGA2-210ENST00000541363 TSPYL2Q9H2G4 693 aaPredicted RBP17.37■□□□□ 0.37
HMGA2-210ENST00000541363 VIMP08670 466 aaKnown RBP17.37■□□□□ 0.37
HMGA2-210ENST00000541363 SLC26A6Q9BXS9 759 aa17.37■□□□□ 0.37
HMGA2-210ENST00000541363 AKNAQ7Z591 1439 aa17.37■□□□□ 0.37
HMGA2-210ENST00000541363 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
HMGA2-210ENST00000541363 ANKRD24Q8TF21 1146 aa17.37■□□□□ 0.37
HMGA2-210ENST00000541363 AGTPBP1Q9UPW5 1226 aa17.37■□□□□ 0.37
HMGA2-210ENST00000541363 SPAG1Q07617 926 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 ITIH3Q06033 890 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 RNF168Q8IYW5 571 aaPredicted RBP17.36■□□□□ 0.37
HMGA2-210ENST00000541363 SEPT8Q92599 483 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 PPP1R12CQ9BZL4 782 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 USP16Q9Y5T5 823 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 PSMD6Q15008 389 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 CCDC62Q6P9F0 684 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 RAB11FIP4Q86YS3 637 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 FMNL3Q8IVF7 1028 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 CALCOCO2Q13137 446 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 SEL1L2Q5TEA6 688 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 FAM212AQ96EL1 285 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 ARID5AQ03989 594 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 JPH4Q96JJ6 628 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 CAPZA3Q96KX2 299 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 PSMA7O14818 248 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 FLIIQ13045 1269 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 SIRT1Q96EB6 747 aa17.36■□□□□ 0.37
HMGA2-210ENST00000541363 ARHGAP24Q8N264 748 aa17.35■□□□□ 0.37
HMGA2-210ENST00000541363 CCDC88BA6NC98 1476 aa17.35■□□□□ 0.37
HMGA2-210ENST00000541363 CETN3O15182 167 aa17.35■□□□□ 0.37
HMGA2-210ENST00000541363 TNNC1P63316 161 aa17.35■□□□□ 0.37
HMGA2-210ENST00000541363 TMEM57Q8N5G2 664 aa17.35■□□□□ 0.37
HMGA2-210ENST00000541363 KIFC2Q96AC6 838 aa17.35■□□□□ 0.37
HMGA2-210ENST00000541363 A0A1B0GUL7 405 aa17.35■□□□□ 0.37
HMGA2-210ENST00000541363 SRGAP1Q7Z6B7 1085 aa17.35■□□□□ 0.37
HMGA2-210ENST00000541363 NEK11Q8NG66 645 aa17.35■□□□□ 0.37
HMGA2-210ENST00000541363 CCDC26Q8TAB7 109 aa17.35■□□□□ 0.37
HMGA2-210ENST00000541363 AFMP43652 599 aa17.35■□□□□ 0.37
HMGA2-210ENST00000541363 ARHGEF2Q92974 986 aaKnown RBP17.35■□□□□ 0.37
HMGA2-210ENST00000541363 MYOM3Q5VTT5 1437 aa17.35■□□□□ 0.37
HMGA2-210ENST00000541363 TLDC2A0PJX2 215 aa17.34■□□□□ 0.37
HMGA2-210ENST00000541363 ANKFY1Q9P2R3 1169 aa17.34■□□□□ 0.37
HMGA2-210ENST00000541363 TFIP11Q9UBB9 837 aaKnown RBP17.34■□□□□ 0.37
HMGA2-210ENST00000541363 MYD88Q99836 296 aa17.34■□□□□ 0.37
HMGA2-210ENST00000541363 EVI5LQ96CN4 794 aa17.34■□□□□ 0.37
HMGA2-210ENST00000541363 LDHCP07864 332 aa17.34■□□□□ 0.37
HMGA2-210ENST00000541363 TMOD3Q9NYL9 352 aa17.34■□□□□ 0.37
HMGA2-210ENST00000541363 HDXQ7Z353 690 aa17.34■□□□□ 0.37
HMGA2-210ENST00000541363 CDK19Q9BWU1 502 aa17.34■□□□□ 0.37
HMGA2-210ENST00000541363 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.34■□□□□ 0.37
HMGA2-210ENST00000541363 BICDL2A1A5D9 508 aa17.33■□□□□ 0.37
HMGA2-210ENST00000541363 WDR46O15213 610 aaKnown RBP17.33■□□□□ 0.37
HMGA2-210ENST00000541363 CLNS1AP54105 237 aaKnown RBP17.33■□□□□ 0.37
HMGA2-210ENST00000541363 C10orf67Q8IYJ2 551 aa17.33■□□□□ 0.37
HMGA2-210ENST00000541363 MCUR1Q96AQ8 359 aa17.33■□□□□ 0.37
HMGA2-210ENST00000541363 INPP1P49441 399 aa17.33■□□□□ 0.36
HMGA2-210ENST00000541363 PPP1R21Q6ZMI0 780 aa17.33■□□□□ 0.36
HMGA2-210ENST00000541363 PRAM1Q96QH2 718 aa17.33■□□□□ 0.36
HMGA2-210ENST00000541363 HAUS2Q9NVX0 235 aa17.33■□□□□ 0.36
HMGA2-210ENST00000541363 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.33■□□□□ 0.36
HMGA2-210ENST00000541363 SKILP12757 684 aa17.33■□□□□ 0.36
HMGA2-210ENST00000541363 RASSF4Q9H2L5 321 aa17.33■□□□□ 0.36
HMGA2-210ENST00000541363 VCX3AQ9NNX9 186 aa17.33■□□□□ 0.36
HMGA2-210ENST00000541363 PPANQ9NQ55 473 aaKnown RBP17.33■□□□□ 0.36
HMGA2-210ENST00000541363 B4DLN1 442 aa17.33■□□□□ 0.36
HMGA2-210ENST00000541363 STK10O94804 968 aaKnown RBP17.33■□□□□ 0.36
HMGA2-210ENST00000541363 MRPL12P52815 198 aaKnown RBP17.33■□□□□ 0.36
HMGA2-210ENST00000541363 GSTO1P78417 241 aa17.33■□□□□ 0.36
HMGA2-210ENST00000541363 FAM160A1Q05DH4 1040 aa17.33■□□□□ 0.36
HMGA2-210ENST00000541363 ZNF710Q8N1W2 664 aa17.33■□□□□ 0.36
HMGA2-210ENST00000541363 NCOA7Q8NI08 942 aa17.33■□□□□ 0.36
HMGA2-210ENST00000541363 SMARCA2P51531 1590 aa17.33■□□□□ 0.36
HMGA2-210ENST00000541363 SSFA2P28290 1259 aa17.33■□□□□ 0.36
HMGA2-210ENST00000541363 ZNF131P52739 623 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms