RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
TTR-203ENST00000541025 BHMTQ93088 406 aa10.02□□□□□ -0.81
TTR-203ENST00000541025 C11orf16Q9NQ32 467 aa10.02□□□□□ -0.81
TTR-203ENST00000541025 EHBP1L1Q8N3D4 1523 aa10.02□□□□□ -0.81
TTR-203ENST00000541025 C1QTNF9BB2RNN3 333 aa10.01□□□□□ -0.81
TTR-203ENST00000541025 RAB44Q7Z6P3 723 aaPredicted RBP10.01□□□□□ -0.81
TTR-203ENST00000541025 MICALL1Q8N3F8 863 aa10.01□□□□□ -0.81
TTR-203ENST00000541025 MYO19Q96H55 970 aa10.01□□□□□ -0.81
TTR-203ENST00000541025 GSX2Q9BZM3 304 aa10.01□□□□□ -0.81
TTR-203ENST00000541025 BCS1LQ9Y276 419 aa10.01□□□□□ -0.81
TTR-203ENST00000541025 STARD13Q9Y3M8 1113 aa10.01□□□□□ -0.81
TTR-203ENST00000541025 SUPT6HQ7KZ85 1726 aaKnown RBP10.01□□□□□ -0.81
TTR-203ENST00000541025 M0R082 166 aa10□□□□□ -0.81
TTR-203ENST00000541025 EPB42P16452 691 aa10□□□□□ -0.81
TTR-203ENST00000541025 CCINQ13939 588 aa10□□□□□ -0.81
TTR-203ENST00000541025 C11orf91Q3C1V1 193 aa10□□□□□ -0.81
TTR-203ENST00000541025 ZNF417Q8TAU3 575 aa10□□□□□ -0.81
TTR-203ENST00000541025 ZNF587Q96SQ5 575 aaPredicted RBP10□□□□□ -0.81
TTR-203ENST00000541025 NOVA2Q9UNW9 492 aaKnown RBP10□□□□□ -0.81
TTR-203ENST00000541025 SAMD9LQ8IVG5 1584 aa10□□□□□ -0.81
TTR-203ENST00000541025 PHLDB1Q86UU1 1377 aa10□□□□□ -0.81
TTR-203ENST00000541025 ADGRL1O94910 1474 aa9.99□□□□□ -0.81
TTR-203ENST00000541025 ABCC1P33527 1531 aa9.99□□□□□ -0.81
TTR-203ENST00000541025 ZMYM4Q5VZL5 1548 aa9.99□□□□□ -0.81
TTR-203ENST00000541025 RAPGEF3O95398 923 aa9.99□□□□□ -0.81
TTR-203ENST00000541025 SPATA31C1P0DKV0 1188 aa9.99□□□□□ -0.81
TTR-203ENST00000541025 ELOAQ14241 798 aaKnown RBP9.99□□□□□ -0.81
TTR-203ENST00000541025 SWI5Q1ZZU3 235 aa9.99□□□□□ -0.81
TTR-203ENST00000541025 CD163Q86VB7 1156 aa9.99□□□□□ -0.81
TTR-203ENST00000541025 DENND4BO75064 1496 aaPredicted RBP9.98□□□□□ -0.81
TTR-203ENST00000541025 ARHGEF40Q8TER5 1519 aa9.98□□□□□ -0.81
TTR-203ENST00000541025 INPP5BP32019 993 aa9.98□□□□□ -0.81
TTR-203ENST00000541025 BAG6P46379 1132 aa9.98□□□□□ -0.81
TTR-203ENST00000541025 C20orf204Q6ZNR8 217 aa9.98□□□□□ -0.81
TTR-203ENST00000541025 PNMA5Q96PV4 448 aa9.98□□□□□ -0.81
TTR-203ENST00000541025 KLK14Q9P0G3 267 aa9.98□□□□□ -0.81
TTR-203ENST00000541025 ACIN1Q9UKV3 1341 aaKnown RBP9.98□□□□□ -0.81
TTR-203ENST00000541025 MTUS2Q5JR59 1369 aa9.98□□□□□ -0.81
TTR-203ENST00000541025 GPATCH8Q9UKJ3 1502 aaKnown RBP9.97□□□□□ -0.81
TTR-203ENST00000541025 LOC100996750A0A140TA64 210 aa9.97□□□□□ -0.81
TTR-203ENST00000541025 ADAM23O75077 832 aa9.97□□□□□ -0.81
TTR-203ENST00000541025 ALBP02768 609 aa9.97□□□□□ -0.81
TTR-203ENST00000541025 IDH3AP50213 366 aa9.97□□□□□ -0.81
TTR-203ENST00000541025 DGKZQ13574 1117 aa9.97□□□□□ -0.81
TTR-203ENST00000541025 COL9A3Q14050 684 aaPredicted RBP9.97□□□□□ -0.81
TTR-203ENST00000541025 PRRT3Q5FWE3 981 aa9.97□□□□□ -0.81
TTR-203ENST00000541025 KRTAP4-6Q9BYQ5 205 aa9.97□□□□□ -0.81
TTR-203ENST00000541025 UBE2OQ9C0C9 1292 aaKnown RBP9.97□□□□□ -0.81
TTR-203ENST00000541025 QTRT2Q9H974 415 aaKnown RBP9.97□□□□□ -0.81
TTR-203ENST00000541025 POGZQ7Z3K3 1410 aa9.97□□□□□ -0.81
TTR-203ENST00000541025 MAP3K1Q13233 1512 aa9.97□□□□□ -0.81
TTR-203ENST00000541025 ARHGEF12Q9NZN5 1544 aa9.97□□□□□ -0.81
TTR-203ENST00000541025 SRPK2P78362 688 aaKnown RBP9.96□□□□□ -0.82
TTR-203ENST00000541025 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.96□□□□□ -0.82
TTR-203ENST00000541025 SCAPERQ9BY12 1400 aa9.96□□□□□ -0.82
TTR-203ENST00000541025 LRRC9Q6ZRR7 1453 aa9.96□□□□□ -0.82
TTR-203ENST00000541025 KDM5CP41229 1560 aa9.96□□□□□ -0.82
TTR-203ENST00000541025 LILRB5O75023 590 aa9.95□□□□□ -0.82
TTR-203ENST00000541025 MICAL2O94851 1124 aa9.95□□□□□ -0.82
TTR-203ENST00000541025 ARSDP51689 593 aa9.95□□□□□ -0.82
TTR-203ENST00000541025 PCSK7Q16549 785 aa9.95□□□□□ -0.82
TTR-203ENST00000541025 IGFLR1Q9H665 355 aa9.95□□□□□ -0.82
TTR-203ENST00000541025 SYCP2Q9BX26 1530 aa9.95□□□□□ -0.82
TTR-203ENST00000541025 HECW2Q9P2P5 1572 aa9.95□□□□□ -0.82
TTR-203ENST00000541025 KIDINS220Q9ULH0 1771 aa9.94□□□□□ -0.82
TTR-203ENST00000541025 BCORL1Q5H9F3 1711 aa9.94□□□□□ -0.82
TTR-203ENST00000541025 ABCA6Q8N139 1617 aa9.94□□□□□ -0.82
TTR-203ENST00000541025 ZFYVE16Q7Z3T8 1539 aa9.94□□□□□ -0.82
TTR-203ENST00000541025 NCOA2Q15596 1464 aa9.94□□□□□ -0.82
TTR-203ENST00000541025 CHRNA4P43681 627 aa9.94□□□□□ -0.82
TTR-203ENST00000541025 TRIM28Q13263 835 aaKnown RBP9.94□□□□□ -0.82
TTR-203ENST00000541025 EFCAB2Q5VUJ9 269 aa9.94□□□□□ -0.82
TTR-203ENST00000541025 IFT43Q96FT9 208 aa9.94□□□□□ -0.82
TTR-203ENST00000541025 SLC6A14Q9UN76 642 aa9.94□□□□□ -0.82
TTR-203ENST00000541025 YEATS2Q9ULM3 1422 aa9.93□□□□□ -0.82
TTR-203ENST00000541025 ATG7O95352 703 aa9.93□□□□□ -0.82
TTR-203ENST00000541025 MAP3K6O95382 1288 aa9.93□□□□□ -0.82
TTR-203ENST00000541025 NID1P14543 1247 aa9.93□□□□□ -0.82
TTR-203ENST00000541025 NFKB1P19838 968 aa9.93□□□□□ -0.82
TTR-203ENST00000541025 TBC1D8BQ0IIM8 1120 aa9.93□□□□□ -0.82
TTR-203ENST00000541025 DNAJB12Q9NXW2 375 aaKnown RBP9.93□□□□□ -0.82
TTR-203ENST00000541025 ZNF518AQ6AHZ1 1483 aa9.92□□□□□ -0.82
TTR-203ENST00000541025 TRAPPC8Q9Y2L5 1435 aa9.92□□□□□ -0.82
TTR-203ENST00000541025 CCNB3Q8WWL7 1395 aa9.92□□□□□ -0.82
TTR-203ENST00000541025 APBA3O96018 575 aa9.92□□□□□ -0.82
TTR-203ENST00000541025 GRNP28799 593 aaKnown RBP9.92□□□□□ -0.82
TTR-203ENST00000541025 C8orf86Q6ZUL3 223 aa9.92□□□□□ -0.82
TTR-203ENST00000541025 PRIMPOLQ96LW4 560 aa9.92□□□□□ -0.82
TTR-203ENST00000541025 LRFN2Q9ULH4 789 aa9.92□□□□□ -0.82
TTR-203ENST00000541025 ADAMTSL3P82987 1691 aa9.92□□□□□ -0.82
TTR-203ENST00000541025 DIP2CQ9Y2E4 1556 aa9.92□□□□□ -0.82
TTR-203ENST00000541025 K7ELQ4 463 aaPredicted RBP9.91□□□□□ -0.82
TTR-203ENST00000541025 OPLAHO14841 1288 aa9.91□□□□□ -0.82
TTR-203ENST00000541025 FKBP5Q13451 457 aaPredicted RBP9.91□□□□□ -0.82
TTR-203ENST00000541025 ZMIZ1Q9ULJ6 1067 aa9.91□□□□□ -0.82
TTR-203ENST00000541025 INO80Q9ULG1 1556 aaPredicted RBP9.91□□□□□ -0.82
TTR-203ENST00000541025 GATA4P43694 442 aa9.9□□□□□ -0.82
TTR-203ENST00000541025 TRAPPC3LQ5T215 181 aa9.9□□□□□ -0.82
TTR-203ENST00000541025 COL26A1Q96A83 441 aa9.9□□□□□ -0.82
TTR-203ENST00000541025 NACC1Q96RE7 527 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms