RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 KAZALD1Q96I82 304 aa16.55■□□□□ 0.24
LTBR-208ENST00000541005 ZNRF3Q9ULT6 936 aa16.55■□□□□ 0.24
LTBR-208ENST00000541005 ANKRD18BA2A2Z9 1011 aa16.54■□□□□ 0.24
LTBR-208ENST00000541005 IQCA1LA6NCM1 817 aa16.54■□□□□ 0.24
LTBR-208ENST00000541005 IGHMBP2P38935 993 aaKnown RBP16.54■□□□□ 0.24
LTBR-208ENST00000541005 WASHC4Q2M389 1173 aa16.54■□□□□ 0.24
LTBR-208ENST00000541005 RABL6Q3YEC7 729 aaPredicted RBP16.54■□□□□ 0.24
LTBR-208ENST00000541005 C16orf71Q8IYS4 520 aaPredicted RBP16.54■□□□□ 0.24
LTBR-208ENST00000541005 SUCLG2Q96I99 432 aa16.54■□□□□ 0.24
LTBR-208ENST00000541005 EYA3Q99504 573 aa16.54■□□□□ 0.24
LTBR-208ENST00000541005 USP44Q9H0E7 712 aa16.54■□□□□ 0.24
LTBR-208ENST00000541005 ANKIB1Q9P2G1 1089 aa16.54■□□□□ 0.24
LTBR-208ENST00000541005 GGA1Q9UJY5 639 aa16.54■□□□□ 0.24
LTBR-208ENST00000541005 MINPP1Q9UNW1 487 aa16.54■□□□□ 0.24
LTBR-208ENST00000541005 C6orf229H3BNL8 230 aa16.53■□□□□ 0.24
LTBR-208ENST00000541005 UFL1O94874 794 aa16.53■□□□□ 0.24
LTBR-208ENST00000541005 IFIT5Q13325 482 aaKnown RBP16.53■□□□□ 0.24
LTBR-208ENST00000541005 LMBR1LQ6UX01 489 aa16.53■□□□□ 0.24
LTBR-208ENST00000541005 ATP2B4P23634 1241 aa16.52■□□□□ 0.24
LTBR-208ENST00000541005 FSTL1Q12841 308 aa16.52■□□□□ 0.24
LTBR-208ENST00000541005 MED23Q9ULK4 1368 aa16.51■□□□□ 0.23
LTBR-208ENST00000541005 YDJCA8MPS7 323 aa16.51■□□□□ 0.23
LTBR-208ENST00000541005 IPO8O15397 1037 aaKnown RBP16.51■□□□□ 0.23
LTBR-208ENST00000541005 CXCL9Q07325 125 aa16.51■□□□□ 0.23
LTBR-208ENST00000541005 ANKRD44Q8N8A2 993 aa16.51■□□□□ 0.23
LTBR-208ENST00000541005 MPHOSPH8Q99549 860 aa16.51■□□□□ 0.23
LTBR-208ENST00000541005 TAF1DQ9H5J8 278 aaPredicted RBP16.51■□□□□ 0.23
LTBR-208ENST00000541005 ZNF609O15014 1411 aa16.51■□□□□ 0.23
LTBR-208ENST00000541005 BCAR3O75815 825 aa16.5■□□□□ 0.23
LTBR-208ENST00000541005 TRIM27P14373 513 aa16.5■□□□□ 0.23
LTBR-208ENST00000541005 CCDC57Q2TAC2 916 aa16.5■□□□□ 0.23
LTBR-208ENST00000541005 INTS3Q68E01 1043 aaKnown RBP16.5■□□□□ 0.23
LTBR-208ENST00000541005 ATF7IPQ6VMQ6 1270 aa16.5■□□□□ 0.23
LTBR-208ENST00000541005 SMC1BQ8NDV3 1235 aa16.5■□□□□ 0.23
LTBR-208ENST00000541005 ANKRD2Q9GZV1 360 aa16.5■□□□□ 0.23
LTBR-208ENST00000541005 BICC1Q9H694 974 aaKnown RBP16.5■□□□□ 0.23
LTBR-208ENST00000541005 HACL1Q9UJ83 578 aa16.5■□□□□ 0.23
LTBR-208ENST00000541005 CHMP3Q9Y3E7 222 aa16.5■□□□□ 0.23
LTBR-208ENST00000541005 ECE2O60344 883 aa16.49■□□□□ 0.23
LTBR-208ENST00000541005 SCNN1DP51172 638 aa16.49■□□□□ 0.23
LTBR-208ENST00000541005 CIAPIN1Q6FI81 312 aa16.49■□□□□ 0.23
LTBR-208ENST00000541005 GPR101Q96P66 508 aaPredicted RBP16.49■□□□□ 0.23
LTBR-208ENST00000541005 ZC3H12CQ9C0D7 883 aaKnown RBP16.49■□□□□ 0.23
LTBR-208ENST00000541005 DBNDD1Q9H9R9 158 aa16.49■□□□□ 0.23
LTBR-208ENST00000541005 LEMD3Q9Y2U8 911 aa16.49■□□□□ 0.23
LTBR-208ENST00000541005 TRPM7Q96QT4 1865 aa16.48■□□□□ 0.23
LTBR-208ENST00000541005 POLR2AP24928 1970 aaKnown RBP16.48■□□□□ 0.23
LTBR-208ENST00000541005 RIMBP2O15034 1052 aa16.48■□□□□ 0.23
LTBR-208ENST00000541005 HSPA6P17066 643 aa16.48■□□□□ 0.23
LTBR-208ENST00000541005 EPHX2P34913 555 aa16.48■□□□□ 0.23
LTBR-208ENST00000541005 CHRNDQ07001 517 aa16.48■□□□□ 0.23
LTBR-208ENST00000541005 TNIP1Q15025 636 aa16.48■□□□□ 0.23
LTBR-208ENST00000541005 GJA3Q9Y6H8 435 aa16.48■□□□□ 0.23
LTBR-208ENST00000541005 MYH13Q9UKX3 1938 aa16.47■□□□□ 0.23
LTBR-208ENST00000541005 ZNF804BA4D1E1 1349 aa16.46■□□□□ 0.23
LTBR-208ENST00000541005 IRS2Q9Y4H2 1338 aa16.46■□□□□ 0.23
LTBR-208ENST00000541005 ARAP2Q8WZ64 1704 aa16.46■□□□□ 0.23
LTBR-208ENST00000541005 RAD17O75943 681 aa16.46■□□□□ 0.23
LTBR-208ENST00000541005 UBTFL1P0CB47 393 aaPredicted RBP16.46■□□□□ 0.23
LTBR-208ENST00000541005 LMOD1P29536 600 aaPredicted RBP16.46■□□□□ 0.23
LTBR-208ENST00000541005 TAF7LQ5H9L4 462 aa16.46■□□□□ 0.23
LTBR-208ENST00000541005 ZKSCAN2Q63HK3 967 aa16.46■□□□□ 0.23
LTBR-208ENST00000541005 PNMA8AQ86V59 439 aaPredicted RBP16.46■□□□□ 0.23
LTBR-208ENST00000541005 LDHDQ86WU2 507 aa16.46■□□□□ 0.23
LTBR-208ENST00000541005 ZNF594Q96JF6 807 aaPredicted RBP16.46■□□□□ 0.23
LTBR-208ENST00000541005 GPRC5DQ9NZD1 345 aa16.46■□□□□ 0.23
LTBR-208ENST00000541005 HDAC5Q9UQL6 1122 aa16.46■□□□□ 0.23
LTBR-208ENST00000541005 WTIPA6NIX2 430 aaPredicted RBP16.45■□□□□ 0.22
LTBR-208ENST00000541005 GMPSP49915 693 aaPredicted RBP16.45■□□□□ 0.22
LTBR-208ENST00000541005 DOK7Q18PE1 504 aa16.45■□□□□ 0.22
LTBR-208ENST00000541005 LDHAL6AQ6ZMR3 332 aa16.45■□□□□ 0.22
LTBR-208ENST00000541005 C15orf52Q6ZUT6 534 aaKnown RBP16.45■□□□□ 0.22
LTBR-208ENST00000541005 FRAT1Q92837 279 aaPredicted RBP16.45■□□□□ 0.22
LTBR-208ENST00000541005 PSMD14O00487 310 aa16.44■□□□□ 0.22
LTBR-208ENST00000541005 POTEIP0CG38 1075 aa16.44■□□□□ 0.22
LTBR-208ENST00000541005 POTEJP0CG39 1038 aa16.44■□□□□ 0.22
LTBR-208ENST00000541005 RPS12P25398 132 aaKnown RBP16.44■□□□□ 0.22
LTBR-208ENST00000541005 EPS15P42566 896 aa16.44■□□□□ 0.22
LTBR-208ENST00000541005 CHADLQ6NUI6 762 aa16.44■□□□□ 0.22
LTBR-208ENST00000541005 PODNQ7Z5L7 613 aa16.44■□□□□ 0.22
LTBR-208ENST00000541005 DPF2Q92785 391 aa16.44■□□□□ 0.22
LTBR-208ENST00000541005 MEIS3Q99687 375 aa16.44■□□□□ 0.22
LTBR-208ENST00000541005 CNNM1Q9NRU3 951 aa16.44■□□□□ 0.22
LTBR-208ENST00000541005 GNAI3P08754 354 aa16.43■□□□□ 0.22
LTBR-208ENST00000541005 VIL1P09327 827 aaKnown RBP16.43■□□□□ 0.22
LTBR-208ENST00000541005 RFX5P48382 616 aaPredicted RBP16.43■□□□□ 0.22
LTBR-208ENST00000541005 COA1Q9GZY4 146 aa16.43■□□□□ 0.22
LTBR-208ENST00000541005 TNNQ9UQP3 1299 aa16.43■□□□□ 0.22
LTBR-208ENST00000541005 RIPOR2Q9Y4F9 1068 aa16.43■□□□□ 0.22
LTBR-208ENST00000541005 MROH5Q6ZUA9 1318 aa16.43■□□□□ 0.22
LTBR-208ENST00000541005 ECM29Q5VYK3 1845 aa16.42■□□□□ 0.22
LTBR-208ENST00000541005 G3V3G9 751 aa16.42■□□□□ 0.22
LTBR-208ENST00000541005 KLRK1P26718 216 aa16.42■□□□□ 0.22
LTBR-208ENST00000541005 KCNJ4P48050 445 aa16.42■□□□□ 0.22
LTBR-208ENST00000541005 DCAF8Q5TAQ9 597 aa16.42■□□□□ 0.22
LTBR-208ENST00000541005 USP50Q70EL3 339 aaPredicted RBP16.42■□□□□ 0.22
LTBR-208ENST00000541005 TXNRD3Q86VQ6 643 aa16.42■□□□□ 0.22
LTBR-208ENST00000541005 KCNQ5Q9NR82 932 aa16.42■□□□□ 0.22
LTBR-208ENST00000541005 ADARB2Q9NS39 739 aaKnown RBP16.42■□□□□ 0.22
LTBR-208ENST00000541005 LRRFIP2Q9Y608 721 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms