RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 GREM2Q9H772 168 aa21.78■■□□□ 1.08
CACNA2D4-211ENST00000540728 GGA1Q9UJY5 639 aa21.78■■□□□ 1.08
CACNA2D4-211ENST00000540728 G3V3G9 751 aa21.77■■□□□ 1.08
CACNA2D4-211ENST00000540728 UFL1O94874 794 aa21.77■■□□□ 1.08
CACNA2D4-211ENST00000540728 DCAF8Q5TAQ9 597 aa21.77■■□□□ 1.08
CACNA2D4-211ENST00000540728 CNTROBQ8N137 903 aa21.77■■□□□ 1.08
CACNA2D4-211ENST00000540728 BCL2L13Q9BXK5 485 aa21.77■■□□□ 1.08
CACNA2D4-211ENST00000540728 SPEF2Q9C093 1822 aa21.77■■□□□ 1.08
CACNA2D4-211ENST00000540728 SLC4A10Q6U841 1118 aa21.76■■□□□ 1.07
CACNA2D4-211ENST00000540728 DBNDD1Q9H9R9 158 aa21.76■■□□□ 1.07
CACNA2D4-211ENST00000540728 GPRC5DQ9NZD1 345 aa21.76■■□□□ 1.07
CACNA2D4-211ENST00000540728 XDHP47989 1333 aa21.76■■□□□ 1.07
CACNA2D4-211ENST00000540728 TMEM88BA6NKF7 163 aa21.75■■□□□ 1.07
CACNA2D4-211ENST00000540728 ITGBL1O95965 494 aaPredicted RBP21.75■■□□□ 1.07
CACNA2D4-211ENST00000540728 IGHMBP2P38935 993 aaKnown RBP21.75■■□□□ 1.07
CACNA2D4-211ENST00000540728 CASP7P55210 303 aa21.75■■□□□ 1.07
CACNA2D4-211ENST00000540728 DIEXFQ68CQ4 756 aaKnown RBP21.75■■□□□ 1.07
CACNA2D4-211ENST00000540728 GPR101Q96P66 508 aaPredicted RBP21.75■■□□□ 1.07
CACNA2D4-211ENST00000540728 BSDC1Q9NW68 430 aaPredicted RBP21.75■■□□□ 1.07
CACNA2D4-211ENST00000540728 YDJCA8MPS7 323 aa21.74■■□□□ 1.07
CACNA2D4-211ENST00000540728 ALDH1L1O75891 902 aa21.74■■□□□ 1.07
CACNA2D4-211ENST00000540728 USP50Q70EL3 339 aaPredicted RBP21.74■■□□□ 1.07
CACNA2D4-211ENST00000540728 CDCA7LQ96GN5 454 aa21.74■■□□□ 1.07
CACNA2D4-211ENST00000540728 SRCIN1Q9C0H9 1055 aa21.74■■□□□ 1.07
CACNA2D4-211ENST00000540728 ADARB2Q9NS39 739 aaKnown RBP21.74■■□□□ 1.07
CACNA2D4-211ENST00000540728 C9orf78Q9NZ63 289 aaPredicted RBP21.74■■□□□ 1.07
CACNA2D4-211ENST00000540728 CSF1RP07333 972 aa21.73■■□□□ 1.07
CACNA2D4-211ENST00000540728 ITGA6P23229 1130 aa21.73■■□□□ 1.07
CACNA2D4-211ENST00000540728 ATP2B4P23634 1241 aa21.73■■□□□ 1.07
CACNA2D4-211ENST00000540728 MRPL50Q8N5N7 158 aaKnown RBP21.73■■□□□ 1.07
CACNA2D4-211ENST00000540728 MPHOSPH8Q99549 860 aa21.73■■□□□ 1.07
CACNA2D4-211ENST00000540728 CNTNAP1P78357 1384 aa21.73■■□□□ 1.07
CACNA2D4-211ENST00000540728 ECE2O60344 883 aa21.72■■□□□ 1.07
CACNA2D4-211ENST00000540728 DOK7Q18PE1 504 aa21.72■■□□□ 1.07
CACNA2D4-211ENST00000540728 PCNTO95613 3336 aa21.71■■□□□ 1.07
CACNA2D4-211ENST00000540728 ANKRD18BA2A2Z9 1011 aa21.71■■□□□ 1.07
CACNA2D4-211ENST00000540728 GRM8O00222 908 aa21.71■■□□□ 1.07
CACNA2D4-211ENST00000540728 FAM161AQ3B820 660 aa21.71■■□□□ 1.07
CACNA2D4-211ENST00000540728 SSH1Q8WYL5 1049 aa21.71■■□□□ 1.07
CACNA2D4-211ENST00000540728 ABT1Q9ULW3 272 aaKnown RBP21.71■■□□□ 1.07
CACNA2D4-211ENST00000540728 MINPP1Q9UNW1 487 aa21.71■■□□□ 1.07
CACNA2D4-211ENST00000540728 CHMP3Q9Y3E7 222 aa21.71■■□□□ 1.07
CACNA2D4-211ENST00000540728 PTPRCP08575 1304 aa21.71■■□□□ 1.07
CACNA2D4-211ENST00000540728 HSPA1AP0DMV8 641 aaKnown RBP21.7■■□□□ 1.06
CACNA2D4-211ENST00000540728 HSPA1BP0DMV9 641 aaKnown RBP21.7■■□□□ 1.06
CACNA2D4-211ENST00000540728 ALDH1L2Q3SY69 923 aa21.7■■□□□ 1.06
CACNA2D4-211ENST00000540728 H7C1D1 291 aa21.69■■□□□ 1.06
CACNA2D4-211ENST00000540728 PSMD14O00487 310 aa21.69■■□□□ 1.06
CACNA2D4-211ENST00000540728 CT47B1P0C2W7 299 aaPredicted RBP21.69■■□□□ 1.06
CACNA2D4-211ENST00000540728 IFIT5Q13325 482 aaKnown RBP21.69■■□□□ 1.06
CACNA2D4-211ENST00000540728 MICALL2Q8IY33 904 aa21.69■■□□□ 1.06
CACNA2D4-211ENST00000540728 TRMT2AQ8IZ69 625 aaKnown RBP21.69■■□□□ 1.06
CACNA2D4-211ENST00000540728 ANKRD2Q9GZV1 360 aa21.69■■□□□ 1.06
CACNA2D4-211ENST00000540728 CNOT7Q9UIV1 285 aaKnown RBP21.69■■□□□ 1.06
CACNA2D4-211ENST00000540728 ZBTB12Q9Y330 459 aaPredicted RBP21.69■■□□□ 1.06
CACNA2D4-211ENST00000540728 FOXO4P98177 505 aa21.68■■□□□ 1.06
CACNA2D4-211ENST00000540728 MIER1Q8N108 512 aa21.68■■□□□ 1.06
CACNA2D4-211ENST00000540728 DPF2Q92785 391 aa21.68■■□□□ 1.06
CACNA2D4-211ENST00000540728 SHTN1A0MZ66 631 aa21.67■■□□□ 1.06
CACNA2D4-211ENST00000540728 TRAF5O00463 557 aa21.67■■□□□ 1.06
CACNA2D4-211ENST00000540728 RPS12P25398 132 aaKnown RBP21.67■■□□□ 1.06
CACNA2D4-211ENST00000540728 CCT4P50991 539 aaKnown RBP21.67■■□□□ 1.06
CACNA2D4-211ENST00000540728 TRPM4Q8TD43 1214 aa21.67■■□□□ 1.06
CACNA2D4-211ENST00000540728 SMC4Q9NTJ3 1288 aa21.67■■□□□ 1.06
CACNA2D4-211ENST00000540728 LEMD3Q9Y2U8 911 aa21.67■■□□□ 1.06
CACNA2D4-211ENST00000540728 TRPM7Q96QT4 1865 aa21.66■■□□□ 1.06
CACNA2D4-211ENST00000540728 FMR1Q06787 632 aaKnown RBP eCLIP21.66■■□□□ 1.06
CACNA2D4-211ENST00000540728 CCDC57Q2TAC2 916 aa21.66■■□□□ 1.06
CACNA2D4-211ENST00000540728 IFFO2Q5TF58 517 aa21.66■■□□□ 1.06
CACNA2D4-211ENST00000540728 LMBR1LQ6UX01 489 aa21.66■■□□□ 1.06
CACNA2D4-211ENST00000540728 SCN9AQ15858 1988 aa21.66■■□□□ 1.06
CACNA2D4-211ENST00000540728 TAF7LQ5H9L4 462 aa21.65■■□□□ 1.06
CACNA2D4-211ENST00000540728 PAXIP1Q6ZW49 1069 aaPredicted RBP21.65■■□□□ 1.06
CACNA2D4-211ENST00000540728 PODNQ7Z5L7 613 aa21.65■■□□□ 1.06
CACNA2D4-211ENST00000540728 KCNQ5Q9NR82 932 aa21.65■■□□□ 1.06
CACNA2D4-211ENST00000540728 MED23Q9ULK4 1368 aa21.64■■□□□ 1.06
CACNA2D4-211ENST00000540728 KCNJ4P48050 445 aa21.64■■□□□ 1.05
CACNA2D4-211ENST00000540728 VEGFBP49765 207 aa21.64■■□□□ 1.05
CACNA2D4-211ENST00000540728 GLIS2Q9BZE0 524 aaPredicted RBP21.64■■□□□ 1.05
CACNA2D4-211ENST00000540728 ZNF804BA4D1E1 1349 aa21.63■■□□□ 1.05
CACNA2D4-211ENST00000540728 VIL1P09327 827 aaKnown RBP21.63■■□□□ 1.05
CACNA2D4-211ENST00000540728 EPHA10Q5JZY3 1008 aa21.63■■□□□ 1.05
CACNA2D4-211ENST00000540728 ZC3H15Q8WU90 426 aaKnown RBP21.63■■□□□ 1.05
CACNA2D4-211ENST00000540728 CHRNDQ07001 517 aa21.62■■□□□ 1.05
CACNA2D4-211ENST00000540728 DEFB115Q30KQ5 88 aa21.62■■□□□ 1.05
CACNA2D4-211ENST00000540728 TBC1D10BQ4KMP7 808 aaPredicted RBP21.62■■□□□ 1.05
CACNA2D4-211ENST00000540728 SAMD7Q7Z3H4 446 aa21.62■■□□□ 1.05
CACNA2D4-211ENST00000540728 ZNF408Q9H9D4 720 aa21.62■■□□□ 1.05
CACNA2D4-211ENST00000540728 PSME4Q14997 1843 aa21.62■■□□□ 1.05
CACNA2D4-211ENST00000540728 UTYO14607 1347 aa21.61■■□□□ 1.05
CACNA2D4-211ENST00000540728 RASSF10A6NK89 507 aa21.61■■□□□ 1.05
CACNA2D4-211ENST00000540728 NBPF7P0C2Y1 421 aaPredicted RBP21.61■■□□□ 1.05
CACNA2D4-211ENST00000540728 HIRAP54198 1017 aaPredicted RBP21.61■■□□□ 1.05
CACNA2D4-211ENST00000540728 GRM1Q13255 1194 aa21.61■■□□□ 1.05
CACNA2D4-211ENST00000540728 SUCLG2Q96I99 432 aa21.61■■□□□ 1.05
CACNA2D4-211ENST00000540728 COA1Q9GZY4 146 aa21.61■■□□□ 1.05
CACNA2D4-211ENST00000540728 USP17L3A6NCW0 530 aa21.6■■□□□ 1.05
CACNA2D4-211ENST00000540728 USP17L4A6NCW7 530 aa21.6■■□□□ 1.05
CACNA2D4-211ENST00000540728 WTIPA6NIX2 430 aaPredicted RBP21.6■■□□□ 1.05
CACNA2D4-211ENST00000540728 CELF2O95319 508 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms