RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 USPL1Q5W0Q7 1092 aa10.01□□□□□ -0.81
C2CD3-215ENST00000540452 LDHAL6AQ6ZMR3 332 aa10.01□□□□□ -0.81
C2CD3-215ENST00000540452 VGLL2Q8N8G2 317 aa10.01□□□□□ -0.81
C2CD3-215ENST00000540452 LINC00116Q8NCU8 138 aa10.01□□□□□ -0.81
C2CD3-215ENST00000540452 MAP4K1Q92918 833 aa10.01□□□□□ -0.81
C2CD3-215ENST00000540452 CDC5LQ99459 802 aaKnown RBP10.01□□□□□ -0.81
C2CD3-215ENST00000540452 FSD1Q9BTV5 496 aa10.01□□□□□ -0.81
C2CD3-215ENST00000540452 HELLSQ9NRZ9 838 aa10.01□□□□□ -0.81
C2CD3-215ENST00000540452 TBC1D2BQ9UPU7 963 aa10.01□□□□□ -0.81
C2CD3-215ENST00000540452 UBR3Q6ZT12 1888 aa10.01□□□□□ -0.81
C2CD3-215ENST00000540452 AKAP11Q9UKA4 1901 aa10.01□□□□□ -0.81
C2CD3-215ENST00000540452 A0A1B0GUL6 1792 aa10.01□□□□□ -0.81
C2CD3-215ENST00000540452 DOCK2Q92608 1830 aa10□□□□□ -0.81
C2CD3-215ENST00000540452 PDE8BO95263 885 aa10□□□□□ -0.81
C2CD3-215ENST00000540452 ZKSCAN1P17029 563 aaPredicted RBP10□□□□□ -0.81
C2CD3-215ENST00000540452 KRT32Q14532 448 aa10□□□□□ -0.81
C2CD3-215ENST00000540452 TTF1Q15361 905 aaPredicted RBP10□□□□□ -0.81
C2CD3-215ENST00000540452 SF3B3Q15393 1217 aaKnown RBP10□□□□□ -0.81
C2CD3-215ENST00000540452 PUM3Q15397 648 aaKnown RBP10□□□□□ -0.81
C2CD3-215ENST00000540452 CLEC17AQ6ZS10 378 aa10□□□□□ -0.81
C2CD3-215ENST00000540452 DBNDD2Q9BQY9 259 aa10□□□□□ -0.81
C2CD3-215ENST00000540452 ALDH8A1Q9H2A2 487 aaPredicted RBP10□□□□□ -0.81
C2CD3-215ENST00000540452 BOLA2Q9H3K6 86 aa10□□□□□ -0.81
C2CD3-215ENST00000540452 TLR7Q9NYK1 1049 aaKnown RBP10□□□□□ -0.81
C2CD3-215ENST00000540452 NIP7Q9Y221 180 aaKnown RBP eCLIP10□□□□□ -0.81
C2CD3-215ENST00000540452 RTCBQ9Y3I0 505 aaKnown RBP10□□□□□ -0.81
C2CD3-215ENST00000540452 BRWD3Q6RI45 1802 aa10□□□□□ -0.81
C2CD3-215ENST00000540452 A0A0G2JS52 829 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 HSP90AA1P07900 732 aaKnown RBP9.99□□□□□ -0.81
C2CD3-215ENST00000540452 UQCRFS1P1P0C7P4 283 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 GPTP24298 496 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 PSMA5P28066 241 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 SSFA2P28290 1259 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 ARID4AP29374 1257 aaPredicted RBP9.99□□□□□ -0.81
C2CD3-215ENST00000540452 NECTIN1Q15223 517 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 ATP2B3Q16720 1220 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 LRRC24Q50LG9 513 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 METTL24Q5JXM2 366 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 SUSD4Q5VX71 490 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 ZSCAN25Q6NSZ9 544 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 CWC27Q6UX04 472 aaKnown RBP9.99□□□□□ -0.81
C2CD3-215ENST00000540452 SEPT12Q8IYM1 358 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 LPIN2Q92539 896 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 DSCC1Q9BVC3 393 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 GREM2Q9H772 168 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 PAG1Q9NWQ8 432 aa9.99□□□□□ -0.81
C2CD3-215ENST00000540452 CCNL1Q9UK58 526 aaPredicted RBP9.99□□□□□ -0.81
C2CD3-215ENST00000540452 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.99□□□□□ -0.81
C2CD3-215ENST00000540452 IFIT1P09914 478 aaKnown RBP9.98□□□□□ -0.81
C2CD3-215ENST00000540452 FGFR2P21802 821 aa9.98□□□□□ -0.81
C2CD3-215ENST00000540452 IGHMBP2P38935 993 aaKnown RBP9.98□□□□□ -0.81
C2CD3-215ENST00000540452 SLC4A3P48751 1232 aa9.98□□□□□ -0.81
C2CD3-215ENST00000540452 NUCB2P80303 420 aa9.98□□□□□ -0.81
C2CD3-215ENST00000540452 CUL4AQ13619 759 aa9.98□□□□□ -0.81
C2CD3-215ENST00000540452 MCMDC2Q4G0Z9 681 aa9.98□□□□□ -0.81
C2CD3-215ENST00000540452 JARID2Q92833 1246 aaPredicted RBP9.98□□□□□ -0.81
C2CD3-215ENST00000540452 ARXQ96QS3 562 aa9.98□□□□□ -0.81
C2CD3-215ENST00000540452 CNNM1Q9NRU3 951 aa9.98□□□□□ -0.81
C2CD3-215ENST00000540452 U3KPZ7 1027 aaPredicted RBP9.98□□□□□ -0.81
C2CD3-215ENST00000540452 RPAP1Q9BWH6 1393 aaPredicted RBP9.98□□□□□ -0.81
C2CD3-215ENST00000540452 ZPR1O75312 459 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 HMGB1P09429 215 aaKnown RBP9.97□□□□□ -0.81
C2CD3-215ENST00000540452 SLC5A1P13866 664 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 NEK4P51957 841 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 NMIQ13287 307 aaPredicted RBP9.97□□□□□ -0.81
C2CD3-215ENST00000540452 ANKRD1Q15327 319 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 NFKBIBQ15653 356 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 TTC39AQ5SRH9 613 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 ZMYM1Q5SVZ6 1142 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 GORABQ5T7V8 394 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 VPS53Q5VIR6 699 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 KRT27Q7Z3Y8 459 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 CHMP4CQ96CF2 233 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 XAGE2Q96GT9 111 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 ZSCAN31Q96LW9 406 aaPredicted RBP9.97□□□□□ -0.81
C2CD3-215ENST00000540452 NEUROD6Q96NK8 337 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 MPHOSPH8Q99549 860 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.97□□□□□ -0.81
C2CD3-215ENST00000540452 SH2B1Q9NRF2 756 aaPredicted RBP9.97□□□□□ -0.81
C2CD3-215ENST00000540452 SNX14Q9Y5W7 946 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 PDS5AQ29RF7 1337 aaKnown RBP9.97□□□□□ -0.81
C2CD3-215ENST00000540452 CARMIL3Q8ND23 1372 aa9.97□□□□□ -0.81
C2CD3-215ENST00000540452 DDX11L8A8MPP1 907 aa9.96□□□□□ -0.82
C2CD3-215ENST00000540452 PLSCR1O15162 318 aa9.96□□□□□ -0.82
C2CD3-215ENST00000540452 TAF5LO75529 589 aa9.96□□□□□ -0.82
C2CD3-215ENST00000540452 MAP4K4O95819 1239 aaPredicted RBP9.96□□□□□ -0.82
C2CD3-215ENST00000540452 TIMM10P62072 90 aa9.96□□□□□ -0.82
C2CD3-215ENST00000540452 RAB3GAP1Q15042 981 aa9.96□□□□□ -0.82
C2CD3-215ENST00000540452 TPTE2Q6XPS3 522 aa9.96□□□□□ -0.82
C2CD3-215ENST00000540452 ZNF594Q96JF6 807 aaPredicted RBP9.96□□□□□ -0.82
C2CD3-215ENST00000540452 TTC14Q96N46 770 aa9.96□□□□□ -0.82
C2CD3-215ENST00000540452 GBP4Q96PP9 640 aa9.96□□□□□ -0.82
C2CD3-215ENST00000540452 SETDB2Q96T68 719 aa9.96□□□□□ -0.82
C2CD3-215ENST00000540452 PUS3Q9BZE2 481 aaKnown RBP9.96□□□□□ -0.82
C2CD3-215ENST00000540452 BCL11AQ9H165 835 aa9.96□□□□□ -0.82
C2CD3-215ENST00000540452 SLKQ9H2G2 1235 aaPredicted RBP9.96□□□□□ -0.82
C2CD3-215ENST00000540452 ZSWIM6Q9HCJ5 1215 aa9.96□□□□□ -0.82
C2CD3-215ENST00000540452 BSDC1Q9NW68 430 aaPredicted RBP9.96□□□□□ -0.82
C2CD3-215ENST00000540452 ZMYM6O95789 1325 aa9.96□□□□□ -0.82
C2CD3-215ENST00000540452 DUOX1Q9NRD9 1551 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms