RNA–Protein interactions for RNA: ENST00000540351.1

UBC-207, Transcript of ubiquitin C, humanhuman

TSL 1 (best)

Gene UBC, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-207ENST00000540351 REM2Q8IYK8 340 aaPredicted RBP17.03■□□□□ 0.32
UBC-207ENST00000540351 TBC1D16Q8TBP0 767 aa17.03■□□□□ 0.32
UBC-207ENST00000540351 ISCA1Q9BUE6 129 aa17.03■□□□□ 0.32
UBC-207ENST00000540351 EIF2S2P20042 333 aaKnown RBP17.02■□□□□ 0.32
UBC-207ENST00000540351 DOK7Q18PE1 504 aa17.02■□□□□ 0.32
UBC-207ENST00000540351 NOM1Q5C9Z4 860 aaKnown RBP17.02■□□□□ 0.32
UBC-207ENST00000540351 ZNF296Q8WUU4 475 aaPredicted RBP17.02■□□□□ 0.32
UBC-207ENST00000540351 NSFL1CQ9UNZ2 370 aaKnown RBP17.02■□□□□ 0.32
UBC-207ENST00000540351 ZNF646O15015 1829 aaPredicted RBP17.02■□□□□ 0.31
UBC-207ENST00000540351 RIMBP2O15034 1052 aa17.01■□□□□ 0.31
UBC-207ENST00000540351 PKN2Q16513 984 aaKnown RBP17.01■□□□□ 0.31
UBC-207ENST00000540351 BABAM1Q9NWV8 329 aa17.01■□□□□ 0.31
UBC-207ENST00000540351 PODXL2Q9NZ53 605 aa17.01■□□□□ 0.31
UBC-207ENST00000540351 TSPYL4Q9UJ04 414 aa17.01■□□□□ 0.31
UBC-207ENST00000540351 FKBP1BP68106 108 aa17■□□□□ 0.31
UBC-207ENST00000540351 MOB2Q70IA6 237 aa17■□□□□ 0.31
UBC-207ENST00000540351 SULF1Q8IWU6 871 aa17■□□□□ 0.31
UBC-207ENST00000540351 ZNF428Q96B54 188 aa17■□□□□ 0.31
UBC-207ENST00000540351 TM4SF4P48230 202 aa16.99■□□□□ 0.31
UBC-207ENST00000540351 AIMP1Q12904 312 aaKnown RBP16.99■□□□□ 0.31
UBC-207ENST00000540351 KRT24Q2M2I5 525 aa16.99■□□□□ 0.31
UBC-207ENST00000540351 ANGEL2Q5VTE6 544 aaKnown RBP16.99■□□□□ 0.31
UBC-207ENST00000540351 FAM89AQ96GI7 184 aa16.99■□□□□ 0.31
UBC-207ENST00000540351 CFHR5Q9BXR6 569 aa16.99■□□□□ 0.31
UBC-207ENST00000540351 SZT2Q5T011 3432 aa16.99■□□□□ 0.31
UBC-207ENST00000540351 PITPNM2Q9BZ72 1349 aa16.98■□□□□ 0.31
UBC-207ENST00000540351 TBC1D8O95759 1140 aa16.98■□□□□ 0.31
UBC-207ENST00000540351 SCARF1Q14162 830 aa16.98■□□□□ 0.31
UBC-207ENST00000540351 R3HDMLQ9H3Y0 253 aa16.98■□□□□ 0.31
UBC-207ENST00000540351 C6orf229H3BNL8 230 aa16.97■□□□□ 0.31
UBC-207ENST00000540351 TRIM28Q13263 835 aaKnown RBP16.97■□□□□ 0.31
UBC-207ENST00000540351 RSBN1LQ6PCB5 846 aaPredicted RBP16.97■□□□□ 0.31
UBC-207ENST00000540351 AGBL3Q8NEM8 1001 aa16.97■□□□□ 0.31
UBC-207ENST00000540351 CCER1Q8TC90 406 aaPredicted RBP16.97■□□□□ 0.31
UBC-207ENST00000540351 KIAA0100Q14667 2235 aaKnown RBP16.97■□□□□ 0.31
UBC-207ENST00000540351 GPR25O00155 361 aa16.96■□□□□ 0.31
UBC-207ENST00000540351 RPS8P62241 208 aaKnown RBP16.96■□□□□ 0.31
UBC-207ENST00000540351 PLBD2Q8NHP8 589 aa16.96■□□□□ 0.31
UBC-207ENST00000540351 NECTIN2Q92692 538 aa16.96■□□□□ 0.31
UBC-207ENST00000540351 EYA3Q99504 573 aa16.96■□□□□ 0.31
UBC-207ENST00000540351 FBXO46Q6PJ61 603 aaPredicted RBP16.95■□□□□ 0.3
UBC-207ENST00000540351 SCAF8Q9UPN6 1271 aaKnown RBP16.95■□□□□ 0.3
UBC-207ENST00000540351 UBE2Q2LH0YL09 131 aa16.94■□□□□ 0.3
UBC-207ENST00000540351 CHL1O00533 1208 aa16.94■□□□□ 0.3
UBC-207ENST00000540351 SEC31BQ9NQW1 1179 aa16.94■□□□□ 0.3
UBC-207ENST00000540351 CHPF2Q9P2E5 772 aa16.94■□□□□ 0.3
UBC-207ENST00000540351 WTIPA6NIX2 430 aaPredicted RBP16.93■□□□□ 0.3
UBC-207ENST00000540351 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
UBC-207ENST00000540351 HABP4Q5JVS0 413 aaKnown RBP16.93■□□□□ 0.3
UBC-207ENST00000540351 PRAMEF18Q5VWM3 479 aa16.93■□□□□ 0.3
UBC-207ENST00000540351 ZC3H12CQ9C0D7 883 aaKnown RBP16.93■□□□□ 0.3
UBC-207ENST00000540351 MYOZ2Q9NPC6 264 aa16.93■□□□□ 0.3
UBC-207ENST00000540351 LAMB1P07942 1786 aa16.92■□□□□ 0.3
UBC-207ENST00000540351 RANBP2P49792 3224 aaKnown RBP16.92■□□□□ 0.3
UBC-207ENST00000540351 IRS4O14654 1257 aaPredicted RBP16.92■□□□□ 0.3
UBC-207ENST00000540351 ANKRD13DQ6ZTN6 518 aa16.92■□□□□ 0.3
UBC-207ENST00000540351 RBBP6Q7Z6E9 1792 aaKnown RBP16.92■□□□□ 0.3
UBC-207ENST00000540351 USP17L8P0C7I0 530 aa16.91■□□□□ 0.3
UBC-207ENST00000540351 TMPOP42166 694 aaKnown RBP16.91■□□□□ 0.3
UBC-207ENST00000540351 RIPK4P57078 832 aa16.91■□□□□ 0.3
UBC-207ENST00000540351 NBPF9Q3BBW0 867 aa16.91■□□□□ 0.3
UBC-207ENST00000540351 UFL1O94874 794 aa16.9■□□□□ 0.3
UBC-207ENST00000540351 NEFMP07197 916 aa16.9■□□□□ 0.3
UBC-207ENST00000540351 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
UBC-207ENST00000540351 LDLRAD1Q5T700 205 aa16.9■□□□□ 0.3
UBC-207ENST00000540351 GCC1Q96CN9 775 aa16.9■□□□□ 0.3
UBC-207ENST00000540351 HDAC9Q9UKV0 1011 aa16.9■□□□□ 0.3
UBC-207ENST00000540351 POTEFA5A3E0 1075 aa16.89■□□□□ 0.29
UBC-207ENST00000540351 ZBED3Q96IU2 234 aaPredicted RBP16.89■□□□□ 0.29
UBC-207ENST00000540351 GGA1Q9UJY5 639 aa16.89■□□□□ 0.29
UBC-207ENST00000540351 CEP290O15078 2479 aa16.89■□□□□ 0.29
UBC-207ENST00000540351 WNT10BO00744 389 aa16.88■□□□□ 0.29
UBC-207ENST00000540351 FKTNO75072 461 aa16.88■□□□□ 0.29
UBC-207ENST00000540351 HOXB7P09629 217 aa16.88■□□□□ 0.29
UBC-207ENST00000540351 CAP1Q01518 475 aa16.88■□□□□ 0.29
UBC-207ENST00000540351 PTPN12Q05209 780 aaKnown RBP16.88■□□□□ 0.29
UBC-207ENST00000540351 DACT2Q5SW24 774 aa16.88■□□□□ 0.29
UBC-207ENST00000540351 ZBTB38Q8NAP3 1195 aaPredicted RBP16.88■□□□□ 0.29
UBC-207ENST00000540351 TRIM35Q9UPQ4 493 aa16.88■□□□□ 0.29
UBC-207ENST00000540351 MAPK8IP3Q9UPT6 1336 aa16.88■□□□□ 0.29
UBC-207ENST00000540351 USP17L3A6NCW0 530 aa16.87■□□□□ 0.29
UBC-207ENST00000540351 USP17L4A6NCW7 530 aa16.87■□□□□ 0.29
UBC-207ENST00000540351 FXR1P51114 621 aaKnown RBP eCLIP16.87■□□□□ 0.292e-7■■■■□ 19.3
UBC-207ENST00000540351 USP17L1Q7RTZ2 530 aa16.87■□□□□ 0.29
UBC-207ENST00000540351 PODNQ7Z5L7 613 aa16.87■□□□□ 0.29
UBC-207ENST00000540351 MXD3Q9BW11 206 aa16.87■□□□□ 0.29
UBC-207ENST00000540351 HDGFL1Q5TGJ6 251 aa16.86■□□□□ 0.29
UBC-207ENST00000540351 SPRYD7Q5W111 196 aa16.86■□□□□ 0.29
UBC-207ENST00000540351 PNNQ9H307 717 aaKnown RBP16.86■□□□□ 0.29
UBC-207ENST00000540351 DBF4Q9UBU7 674 aaPredicted RBP16.86■□□□□ 0.29
UBC-207ENST00000540351 TRIOBPQ9H2D6 2365 aa16.85■□□□□ 0.29
UBC-207ENST00000540351 OTOP1Q7RTM1 612 aa16.85■□□□□ 0.29
UBC-207ENST00000540351 ANKIB1Q9P2G1 1089 aa16.85■□□□□ 0.29
UBC-207ENST00000540351 XDHP47989 1333 aa16.85■□□□□ 0.29
UBC-207ENST00000540351 SSC5DA1L4H1 1573 aa16.85■□□□□ 0.29
UBC-207ENST00000540351 SREBF2Q12772 1141 aa16.84■□□□□ 0.29
UBC-207ENST00000540351 MKRN3Q13064 507 aaKnown RBP16.84■□□□□ 0.29
UBC-207ENST00000540351 MED23Q9ULK4 1368 aa16.84■□□□□ 0.29
UBC-207ENST00000540351 PCCAP05165 728 aaPredicted RBP16.83■□□□□ 0.28
UBC-207ENST00000540351 ATP2B4P23634 1241 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms