RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 TOGARAM1Q9Y4F4 1720 aa9.33□□□□□ -0.92
NECAP1-204ENST00000540083 KDM4AO75164 1064 aa9.32□□□□□ -0.92
NECAP1-204ENST00000540083 ADH1BP00325 375 aa9.32□□□□□ -0.92
NECAP1-204ENST00000540083 CANXP27824 592 aaKnown RBP9.32□□□□□ -0.92
NECAP1-204ENST00000540083 SSTR3P32745 418 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-204ENST00000540083 MRE11P49959 708 aa9.32□□□□□ -0.92
NECAP1-204ENST00000540083 SLC39A6Q13433 755 aa9.32□□□□□ -0.92
NECAP1-204ENST00000540083 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-204ENST00000540083 SLC27A5Q9Y2P5 690 aa9.32□□□□□ -0.92
NECAP1-204ENST00000540083 HEG1Q9ULI3 1381 aa9.32□□□□□ -0.92
NECAP1-204ENST00000540083 ZNF831Q5JPB2 1677 aa9.32□□□□□ -0.92
NECAP1-204ENST00000540083 A0A087WZG4 1122 aa9.31□□□□□ -0.92
NECAP1-204ENST00000540083 GOLGA6L3A6NEY3 463 aa9.31□□□□□ -0.92
NECAP1-204ENST00000540083 ZNF853P0CG23 659 aa9.31□□□□□ -0.92
NECAP1-204ENST00000540083 RRP1P56182 461 aaKnown RBP9.31□□□□□ -0.92
NECAP1-204ENST00000540083 EIF4A1P60842 406 aaKnown RBP9.31□□□□□ -0.92
NECAP1-204ENST00000540083 PTF1AQ7RTS3 328 aa9.31□□□□□ -0.92
NECAP1-204ENST00000540083 ZNF496Q96IT1 587 aaPredicted RBP9.31□□□□□ -0.92
NECAP1-204ENST00000540083 THUMPD2Q9BTF0 503 aaKnown RBP9.31□□□□□ -0.92
NECAP1-204ENST00000540083 SLC24A3Q9HC58 644 aa9.31□□□□□ -0.92
NECAP1-204ENST00000540083 TFCP2L1Q9NZI6 479 aa9.31□□□□□ -0.92
NECAP1-204ENST00000540083 RTCBQ9Y3I0 505 aaKnown RBP9.31□□□□□ -0.92
NECAP1-204ENST00000540083 LY75O60449 1722 aa9.31□□□□□ -0.92
NECAP1-204ENST00000540083 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
NECAP1-204ENST00000540083 CNTNAP4Q9C0A0 1308 aa9.31□□□□□ -0.92
NECAP1-204ENST00000540083 SIPA1L3O60292 1781 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-204ENST00000540083 ESPNB1AK53 854 aa9.3□□□□□ -0.92
NECAP1-204ENST00000540083 GIGYF1O75420 1035 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-204ENST00000540083 CT47B1P0C2W7 299 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-204ENST00000540083 SSFA2P28290 1259 aa9.3□□□□□ -0.92
NECAP1-204ENST00000540083 USP46P62068 366 aa9.3□□□□□ -0.92
NECAP1-204ENST00000540083 SLC15A2Q16348 729 aa9.3□□□□□ -0.92
NECAP1-204ENST00000540083 SLC16A10Q8TF71 515 aa9.3□□□□□ -0.92
NECAP1-204ENST00000540083 ZNF428Q96B54 188 aa9.3□□□□□ -0.92
NECAP1-204ENST00000540083 SPSB2Q99619 263 aa9.3□□□□□ -0.92
NECAP1-204ENST00000540083 RPS6KA4O75676 772 aa9.29□□□□□ -0.92
NECAP1-204ENST00000540083 PTMSP20962 102 aa9.29□□□□□ -0.92
NECAP1-204ENST00000540083 BECN1Q14457 450 aa9.29□□□□□ -0.92
NECAP1-204ENST00000540083 TRAPPC3LQ5T215 181 aa9.29□□□□□ -0.92
NECAP1-204ENST00000540083 GIGYF2Q6Y7W6 1299 aaKnown RBP9.29□□□□□ -0.92
NECAP1-204ENST00000540083 ANP32BQ92688 251 aaKnown RBP9.29□□□□□ -0.92
NECAP1-204ENST00000540083 THAP11Q96EK4 314 aa9.29□□□□□ -0.92
NECAP1-204ENST00000540083 GTPBP4Q9BZE4 634 aaKnown RBP9.29□□□□□ -0.92
NECAP1-204ENST00000540083 MBIPQ9NS73 344 aa9.29□□□□□ -0.92
NECAP1-204ENST00000540083 LRRC4BQ9NT99 713 aa9.29□□□□□ -0.92
NECAP1-204ENST00000540083 CCDC87Q9NVE4 849 aa9.29□□□□□ -0.92
NECAP1-204ENST00000540083 MIS18AQ9NYP9 233 aa9.29□□□□□ -0.92
NECAP1-204ENST00000540083 PAPPAQ13219 1627 aa9.28□□□□□ -0.92
NECAP1-204ENST00000540083 RNF223E7ERA6 249 aa9.28□□□□□ -0.92
NECAP1-204ENST00000540083 FRAT2O75474 233 aaPredicted RBP9.28□□□□□ -0.92
NECAP1-204ENST00000540083 S1PR4O95977 384 aa9.28□□□□□ -0.92
NECAP1-204ENST00000540083 CYP19A1P11511 503 aaPredicted RBP9.28□□□□□ -0.92
NECAP1-204ENST00000540083 IL6STP40189 918 aaPredicted RBP9.28□□□□□ -0.92
NECAP1-204ENST00000540083 CRKLP46109 303 aaKnown RBP9.28□□□□□ -0.92
NECAP1-204ENST00000540083 CCDC30Q5VVM6 783 aa9.28□□□□□ -0.92
NECAP1-204ENST00000540083 DNAJC10Q8IXB1 793 aa9.28□□□□□ -0.92
NECAP1-204ENST00000540083 STK31Q9BXU1 1019 aa9.28□□□□□ -0.92
NECAP1-204ENST00000540083 ZNF521Q96K83 1311 aa9.28□□□□□ -0.92
NECAP1-204ENST00000540083 CICQ96RK0 1608 aaPredicted RBP9.27□□□□□ -0.92
NECAP1-204ENST00000540083 KCPQ6ZWJ8 1503 aa9.27□□□□□ -0.93
NECAP1-204ENST00000540083 RREB1Q92766 1687 aa9.27□□□□□ -0.93
NECAP1-204ENST00000540083 FMNL1O95466 1100 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-204ENST00000540083 RFC4P35249 363 aa9.27□□□□□ -0.93
NECAP1-204ENST00000540083 DMTNQ08495 405 aa9.27□□□□□ -0.93
NECAP1-204ENST00000540083 ITPK1Q13572 414 aa9.27□□□□□ -0.93
NECAP1-204ENST00000540083 DUSP27Q5VZP5 1158 aa9.27□□□□□ -0.93
NECAP1-204ENST00000540083 BRICD5Q6PL45 260 aa9.27□□□□□ -0.93
NECAP1-204ENST00000540083 NUTM1Q86Y26 1132 aa9.27□□□□□ -0.93
NECAP1-204ENST00000540083 PARP9Q8IXQ6 854 aa9.27□□□□□ -0.93
NECAP1-204ENST00000540083 TRIM44Q96DX7 344 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-204ENST00000540083 SLC6A16Q9GZN6 736 aa9.27□□□□□ -0.93
NECAP1-204ENST00000540083 DBF4Q9UBU7 674 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-204ENST00000540083 NAP1L2Q9ULW6 460 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-204ENST00000540083 KDM3BQ7LBC6 1761 aa9.27□□□□□ -0.93
NECAP1-204ENST00000540083 UBR2Q8IWV8 1755 aa9.27□□□□□ -0.93
NECAP1-204ENST00000540083 HOXA2O43364 376 aa9.26□□□□□ -0.93
NECAP1-204ENST00000540083 KCNQ3O43525 872 aa9.26□□□□□ -0.93
NECAP1-204ENST00000540083 LETM1O95202 739 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-204ENST00000540083 GTF2E1P29083 439 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-204ENST00000540083 SLFN5Q08AF3 891 aa9.26□□□□□ -0.93
NECAP1-204ENST00000540083 TWISTNBQ3B726 338 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-204ENST00000540083 Q3C1V9 767 aa9.26□□□□□ -0.93
NECAP1-204ENST00000540083 HS1BP3Q53T59 392 aa9.26□□□□□ -0.93
NECAP1-204ENST00000540083 HDGFL1Q5TGJ6 251 aa9.26□□□□□ -0.93
NECAP1-204ENST00000540083 LINC00116Q8NCU8 138 aa9.26□□□□□ -0.93
NECAP1-204ENST00000540083 PRKD2Q9BZL6 878 aa9.26□□□□□ -0.93
NECAP1-204ENST00000540083 HYPKQ9NX55 129 aa9.26□□□□□ -0.93
NECAP1-204ENST00000540083 ZNF652Q9Y2D9 606 aa9.26□□□□□ -0.93
NECAP1-204ENST00000540083 USP16Q9Y5T5 823 aa9.26□□□□□ -0.93
NECAP1-204ENST00000540083 C5P01031 1676 aa9.26□□□□□ -0.93
NECAP1-204ENST00000540083 IBTKQ9P2D0 1353 aaPredicted RBP9.25□□□□□ -0.93
NECAP1-204ENST00000540083 OFD1O75665 1012 aa9.25□□□□□ -0.93
NECAP1-204ENST00000540083 DDX58O95786 925 aaKnown RBP9.25□□□□□ -0.93
NECAP1-204ENST00000540083 EIF2S2P20042 333 aaKnown RBP9.25□□□□□ -0.93
NECAP1-204ENST00000540083 PDE4DQ08499 809 aa9.25□□□□□ -0.93
NECAP1-204ENST00000540083 CENPQQ7L2Z9 268 aaPredicted RBP9.25□□□□□ -0.93
NECAP1-204ENST00000540083 NLGN1Q8N2Q7 840 aa9.25□□□□□ -0.93
NECAP1-204ENST00000540083 FAM160A2Q8N612 972 aaPredicted RBP9.25□□□□□ -0.93
NECAP1-204ENST00000540083 SLC4A9Q96Q91 983 aa9.25□□□□□ -0.93
NECAP1-204ENST00000540083 DDX21Q9NR30 783 aaKnown RBP eCLIP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms