RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 VEGFAP15692 232 aaPredicted RBP23.08■■□□□ 1.29
SNRPA1-203ENST00000540017 CCT4P50991 539 aaKnown RBP23.08■■□□□ 1.29
SNRPA1-203ENST00000540017 WASHC4Q2M389 1173 aa23.08■■□□□ 1.29
SNRPA1-203ENST00000540017 BICC1Q9H694 974 aaKnown RBP23.08■■□□□ 1.29
SNRPA1-203ENST00000540017 UFL1O94874 794 aa23.07■■□□□ 1.28
SNRPA1-203ENST00000540017 TRIM27P14373 513 aa23.07■■□□□ 1.28
SNRPA1-203ENST00000540017 IGHMBP2P38935 993 aaKnown RBP23.07■■□□□ 1.28
SNRPA1-203ENST00000540017 IFIT5Q13325 482 aaKnown RBP23.07■■□□□ 1.28
SNRPA1-203ENST00000540017 FRAT1Q92837 279 aaPredicted RBP23.07■■□□□ 1.28
SNRPA1-203ENST00000540017 L3MBTL3Q96JM7 780 aaPredicted RBP23.07■■□□□ 1.28
SNRPA1-203ENST00000540017 GGA1Q9UJY5 639 aa23.07■■□□□ 1.28
SNRPA1-203ENST00000540017 XDHP47989 1333 aa23.07■■□□□ 1.28
SNRPA1-203ENST00000540017 YDJCA8MPS7 323 aa23.06■■□□□ 1.28
SNRPA1-203ENST00000540017 TOMM70O94826 608 aa23.06■■□□□ 1.28
SNRPA1-203ENST00000540017 EIF6P56537 245 aaKnown RBP23.06■■□□□ 1.28
SNRPA1-203ENST00000540017 ANKRD44Q8N8A2 993 aa23.06■■□□□ 1.28
SNRPA1-203ENST00000540017 ZNF594Q96JF6 807 aaPredicted RBP23.06■■□□□ 1.28
SNRPA1-203ENST00000540017 ZNRF3Q9ULT6 936 aa23.06■■□□□ 1.28
SNRPA1-203ENST00000540017 CXCL9Q07325 125 aa23.05■■□□□ 1.28
SNRPA1-203ENST00000540017 RABL6Q3YEC7 729 aaPredicted RBP23.05■■□□□ 1.28
SNRPA1-203ENST00000540017 ATF7IPQ6VMQ6 1270 aa23.05■■□□□ 1.28
SNRPA1-203ENST00000540017 GPC2Q8N158 579 aa23.05■■□□□ 1.28
SNRPA1-203ENST00000540017 MPHOSPH8Q99549 860 aa23.05■■□□□ 1.28
SNRPA1-203ENST00000540017 GJA3Q9Y6H8 435 aa23.05■■□□□ 1.28
SNRPA1-203ENST00000540017 CCDC57Q2TAC2 916 aa23.04■■□□□ 1.28
SNRPA1-203ENST00000540017 INTS3Q68E01 1043 aaKnown RBP23.04■■□□□ 1.28
SNRPA1-203ENST00000540017 EYA3Q99504 573 aa23.04■■□□□ 1.28
SNRPA1-203ENST00000540017 DBNDD1Q9H9R9 158 aa23.04■■□□□ 1.28
SNRPA1-203ENST00000540017 IPO8O15397 1037 aaKnown RBP23.03■■□□□ 1.28
SNRPA1-203ENST00000540017 ATP2B4P23634 1241 aa23.03■■□□□ 1.28
SNRPA1-203ENST00000540017 DOK7Q18PE1 504 aa23.03■■□□□ 1.28
SNRPA1-203ENST00000540017 C16orf71Q8IYS4 520 aaPredicted RBP23.03■■□□□ 1.28
SNRPA1-203ENST00000540017 CLUAP1Q96AJ1 413 aa23.03■■□□□ 1.28
SNRPA1-203ENST00000540017 RAD17O75943 681 aa23.02■■□□□ 1.28
SNRPA1-203ENST00000540017 CHRNDQ07001 517 aa23.02■■□□□ 1.28
SNRPA1-203ENST00000540017 KCNQ5Q9NR82 932 aa23.02■■□□□ 1.28
SNRPA1-203ENST00000540017 RBM46Q8TBY0 533 aaKnown RBP23.01■■□□□ 1.27
SNRPA1-203ENST00000540017 MEIS3Q99687 375 aa23.01■■□□□ 1.27
SNRPA1-203ENST00000540017 ZC3H12CQ9C0D7 883 aaKnown RBP23.01■■□□□ 1.27
SNRPA1-203ENST00000540017 ECE2O60344 883 aa23■■□□□ 1.27
SNRPA1-203ENST00000540017 POTEIP0CG38 1075 aa23■■□□□ 1.27
SNRPA1-203ENST00000540017 POTEJP0CG39 1038 aa23■■□□□ 1.27
SNRPA1-203ENST00000540017 SCNN1DP51172 638 aa23■■□□□ 1.27
SNRPA1-203ENST00000540017 ZKSCAN2Q63HK3 967 aa23■■□□□ 1.27
SNRPA1-203ENST00000540017 HELBQ8NG08 1087 aaPredicted RBP23■■□□□ 1.27
SNRPA1-203ENST00000540017 PUS3Q9BZE2 481 aaKnown RBP23■■□□□ 1.27
SNRPA1-203ENST00000540017 TAF1DQ9H5J8 278 aaPredicted RBP23■■□□□ 1.27
SNRPA1-203ENST00000540017 SCN4AP35499 1836 aa23■■□□□ 1.27
SNRPA1-203ENST00000540017 SNAP23O00161 211 aa22.99■■□□□ 1.27
SNRPA1-203ENST00000540017 UBTFL1P0CB47 393 aaPredicted RBP22.99■■□□□ 1.27
SNRPA1-203ENST00000540017 TAF7LQ5H9L4 462 aa22.99■■□□□ 1.27
SNRPA1-203ENST00000540017 CIAPIN1Q6FI81 312 aa22.99■■□□□ 1.27
SNRPA1-203ENST00000540017 LDHAL6AQ6ZMR3 332 aa22.99■■□□□ 1.27
SNRPA1-203ENST00000540017 TXNRD3Q86VQ6 643 aa22.99■■□□□ 1.27
SNRPA1-203ENST00000540017 ANKRD2Q9GZV1 360 aa22.99■■□□□ 1.27
SNRPA1-203ENST00000540017 IQCA1LA6NCM1 817 aa22.98■■□□□ 1.27
SNRPA1-203ENST00000540017 TAF5LO75529 589 aa22.98■■□□□ 1.27
SNRPA1-203ENST00000540017 KLRK1P26718 216 aa22.98■■□□□ 1.27
SNRPA1-203ENST00000540017 HACL1Q9UJ83 578 aa22.98■■□□□ 1.27
SNRPA1-203ENST00000540017 LEMD3Q9Y2U8 911 aa22.98■■□□□ 1.27
SNRPA1-203ENST00000540017 A0A1B0GUL6 1792 aa22.98■■□□□ 1.27
SNRPA1-203ENST00000540017 EPS15P42566 896 aa22.97■■□□□ 1.27
SNRPA1-203ENST00000540017 KLHDC4Q8TBB5 520 aa22.97■■□□□ 1.27
SNRPA1-203ENST00000540017 LRRFIP2Q9Y608 721 aaKnown RBP22.97■■□□□ 1.27
SNRPA1-203ENST00000540017 SCN9AQ15858 1988 aa22.97■■□□□ 1.27
SNRPA1-203ENST00000540017 ZNF804BA4D1E1 1349 aa22.97■■□□□ 1.27
SNRPA1-203ENST00000540017 MED23Q9ULK4 1368 aa22.97■■□□□ 1.27
SNRPA1-203ENST00000540017 PSMD14O00487 310 aa22.96■■□□□ 1.27
SNRPA1-203ENST00000540017 EPHX2P34913 555 aa22.96■■□□□ 1.27
SNRPA1-203ENST00000540017 GMPSP49915 693 aaPredicted RBP22.96■■□□□ 1.27
SNRPA1-203ENST00000540017 TMEM57Q8N5G2 664 aa22.96■■□□□ 1.27
SNRPA1-203ENST00000540017 CNNM1Q9NRU3 951 aa22.96■■□□□ 1.27
SNRPA1-203ENST00000540017 RLBP1P12271 317 aa22.95■■□□□ 1.26
SNRPA1-203ENST00000540017 RFX5P48382 616 aaPredicted RBP22.95■■□□□ 1.26
SNRPA1-203ENST00000540017 TNIP1Q15025 636 aa22.95■■□□□ 1.26
SNRPA1-203ENST00000540017 RIPOR2Q9Y4F9 1068 aa22.95■■□□□ 1.26
SNRPA1-203ENST00000540017 IRS2Q9Y4H2 1338 aa22.94■■□□□ 1.26
SNRPA1-203ENST00000540017 PLIN1O60240 522 aa22.94■■□□□ 1.26
SNRPA1-203ENST00000540017 LRRC24Q50LG9 513 aa22.94■■□□□ 1.26
SNRPA1-203ENST00000540017 GPRC5DQ9NZD1 345 aa22.94■■□□□ 1.26
SNRPA1-203ENST00000540017 ZBTB12Q9Y330 459 aaPredicted RBP22.94■■□□□ 1.26
SNRPA1-203ENST00000540017 G3V3G9 751 aa22.93■■□□□ 1.26
SNRPA1-203ENST00000540017 FSTL1Q12841 308 aa22.93■■□□□ 1.26
SNRPA1-203ENST00000540017 DCAF8Q5TAQ9 597 aa22.93■■□□□ 1.26
SNRPA1-203ENST00000540017 SMC1BQ8NDV3 1235 aa22.93■■□□□ 1.26
SNRPA1-203ENST00000540017 SHTN1A0MZ66 631 aa22.92■■□□□ 1.26
SNRPA1-203ENST00000540017 LMOD1P29536 600 aaPredicted RBP22.92■■□□□ 1.26
SNRPA1-203ENST00000540017 KCNJ4P48050 445 aa22.92■■□□□ 1.26
SNRPA1-203ENST00000540017 EAPPQ56P03 285 aaPredicted RBP22.92■■□□□ 1.26
SNRPA1-203ENST00000540017 GNAI3P08754 354 aa22.91■■□□□ 1.26
SNRPA1-203ENST00000540017 PTPN12Q05209 780 aaKnown RBP22.91■■□□□ 1.26
SNRPA1-203ENST00000540017 DZIP1LQ8IYY4 767 aaKnown RBP22.91■■□□□ 1.26
SNRPA1-203ENST00000540017 ADAMTSL1Q8N6G6 1762 aa22.91■■□□□ 1.26
SNRPA1-203ENST00000540017 VIL1P09327 827 aaKnown RBP22.9■■□□□ 1.26
SNRPA1-203ENST00000540017 HSPA6P17066 643 aa22.9■■□□□ 1.26
SNRPA1-203ENST00000540017 PODNQ7Z5L7 613 aa22.9■■□□□ 1.26
SNRPA1-203ENST00000540017 RCAN3Q9UKA8 241 aa22.9■■□□□ 1.26
SNRPA1-203ENST00000540017 CHADLQ6NUI6 762 aa22.89■■□□□ 1.25
SNRPA1-203ENST00000540017 C15orf52Q6ZUT6 534 aaKnown RBP22.89■■□□□ 1.25
SNRPA1-203ENST00000540017 LDHDQ86WU2 507 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms