RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 ERVV-1B6SEH8 477 aa11.9□□□□□ -0.5
MDH1-215ENST00000539945 GSPT1P15170 499 aaKnown RBP11.9□□□□□ -0.5
MDH1-215ENST00000539945 PDE1AP54750 535 aa11.9□□□□□ -0.5
MDH1-215ENST00000539945 KCNC4Q03721 635 aa11.9□□□□□ -0.5
MDH1-215ENST00000539945 ITPK1Q13572 414 aa11.9□□□□□ -0.5
MDH1-215ENST00000539945 EPHA10Q5JZY3 1008 aa11.9□□□□□ -0.5
MDH1-215ENST00000539945 GIGYF2Q6Y7W6 1299 aaKnown RBP11.9□□□□□ -0.5
MDH1-215ENST00000539945 NPM2Q86SE8 214 aaKnown RBP11.9□□□□□ -0.5
MDH1-215ENST00000539945 ERC1Q8IUD2 1116 aa11.9□□□□□ -0.5
MDH1-215ENST00000539945 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
MDH1-215ENST00000539945 CCDC87Q9NVE4 849 aa11.9□□□□□ -0.5
MDH1-215ENST00000539945 STAP2Q9UGK3 403 aa11.9□□□□□ -0.5
MDH1-215ENST00000539945 ZNF330Q9Y3S2 320 aaPredicted RBP11.9□□□□□ -0.5
MDH1-215ENST00000539945 NHSQ6T4R5 1651 aa11.89□□□□□ -0.51
MDH1-215ENST00000539945 CRKLP46109 303 aaKnown RBP11.89□□□□□ -0.51
MDH1-215ENST00000539945 EIF5P55010 431 aaKnown RBP11.89□□□□□ -0.51
MDH1-215ENST00000539945 HSP90AB3PQ58FF7 597 aa11.89□□□□□ -0.51
MDH1-215ENST00000539945 UPF2Q9HAU5 1272 aaKnown RBP11.89□□□□□ -0.51
MDH1-215ENST00000539945 MX1P20591 662 aa11.88□□□□□ -0.51
MDH1-215ENST00000539945 FOXO4P98177 505 aa11.88□□□□□ -0.51
MDH1-215ENST00000539945 JARID2Q92833 1246 aaPredicted RBP11.88□□□□□ -0.51
MDH1-215ENST00000539945 DDX27Q96GQ7 796 aaKnown RBP11.88□□□□□ -0.51
MDH1-215ENST00000539945 IPO9Q96P70 1041 aaKnown RBP11.88□□□□□ -0.51
MDH1-215ENST00000539945 QTRT2Q9H974 415 aaKnown RBP11.88□□□□□ -0.51
MDH1-215ENST00000539945 COPRSQ9NQ92 184 aa11.88□□□□□ -0.51
MDH1-215ENST00000539945 AOX1Q06278 1338 aa11.88□□□□□ -0.51
MDH1-215ENST00000539945 CDC45O75419 566 aa11.87□□□□□ -0.51
MDH1-215ENST00000539945 PCCAP05165 728 aaPredicted RBP11.87□□□□□ -0.51
MDH1-215ENST00000539945 RFX5P48382 616 aaPredicted RBP11.87□□□□□ -0.51
MDH1-215ENST00000539945 G3BP1Q13283 466 aaKnown RBP eCLIP11.87□□□□□ -0.517e-7■■□□□ 13
MDH1-215ENST00000539945 OS9Q13438 667 aaPredicted RBP11.87□□□□□ -0.51
MDH1-215ENST00000539945 HLFQ16534 295 aa11.87□□□□□ -0.51
MDH1-215ENST00000539945 DZIP3Q86Y13 1208 aaKnown RBP11.87□□□□□ -0.51
MDH1-215ENST00000539945 SEPT12Q8IYM1 358 aa11.87□□□□□ -0.51
MDH1-215ENST00000539945 BCL11AQ9H165 835 aa11.87□□□□□ -0.51
MDH1-215ENST00000539945 IL1RAPL2Q9NP60 686 aa11.87□□□□□ -0.51
MDH1-215ENST00000539945 PA2G4Q9UQ80 394 aaKnown RBP11.87□□□□□ -0.51
MDH1-215ENST00000539945 COL5A3P25940 1745 aaPredicted RBP11.87□□□□□ -0.51
MDH1-215ENST00000539945 BTAF1O14981 1849 aa11.86□□□□□ -0.51
MDH1-215ENST00000539945 EIF5BO60841 1220 aaKnown RBP11.86□□□□□ -0.51
MDH1-215ENST00000539945 SDSP20132 328 aa11.86□□□□□ -0.51
MDH1-215ENST00000539945 BCAMP50895 628 aa11.86□□□□□ -0.51
MDH1-215ENST00000539945 ANKRD36CQ5JPF3 1778 aa11.86□□□□□ -0.51
MDH1-215ENST00000539945 TBC1D9Q6ZT07 1266 aa11.86□□□□□ -0.51
MDH1-215ENST00000539945 ZBTB38Q8NAP3 1195 aaPredicted RBP11.86□□□□□ -0.51
MDH1-215ENST00000539945 ARXQ96QS3 562 aa11.86□□□□□ -0.51
MDH1-215ENST00000539945 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
MDH1-215ENST00000539945 TYW1BQ6NUM6 668 aa11.86□□□□□ -0.51
MDH1-215ENST00000539945 LMBR1LQ6UX01 489 aa11.86□□□□□ -0.51
MDH1-215ENST00000539945 PTF1AQ7RTS3 328 aa11.86□□□□□ -0.51
MDH1-215ENST00000539945 NLRP10Q86W26 655 aa11.86□□□□□ -0.51
MDH1-215ENST00000539945 CLASRPQ8N2M8 674 aaKnown RBP11.86□□□□□ -0.51
MDH1-215ENST00000539945 DDRGK1Q96HY6 314 aa11.86□□□□□ -0.51
MDH1-215ENST00000539945 TBC1D32Q96NH3 1257 aa11.86□□□□□ -0.51
MDH1-215ENST00000539945 PLA2G12BQ9BX93 195 aa11.86□□□□□ -0.51
MDH1-215ENST00000539945 TBC1D2BQ9UPU7 963 aa11.86□□□□□ -0.51
MDH1-215ENST00000539945 MYH14Q7Z406 1995 aaKnown RBP11.85□□□□□ -0.51
MDH1-215ENST00000539945 NUP98P52948 1817 aa11.85□□□□□ -0.51
MDH1-215ENST00000539945 CDHR2Q9BYE9 1310 aa11.85□□□□□ -0.51
MDH1-215ENST00000539945 CNTNAP4Q9C0A0 1308 aa11.85□□□□□ -0.51
MDH1-215ENST00000539945 SASH1O94885 1247 aa11.85□□□□□ -0.51
MDH1-215ENST00000539945 PTPN12Q05209 780 aaKnown RBP11.85□□□□□ -0.51
MDH1-215ENST00000539945 PROX2Q3B8N5 592 aa11.85□□□□□ -0.51
MDH1-215ENST00000539945 ZNF34Q8IZ26 560 aa11.85□□□□□ -0.51
MDH1-215ENST00000539945 SBF2Q86WG5 1849 aa11.85□□□□□ -0.51
MDH1-215ENST00000539945 TUBGCP6Q96RT7 1819 aa11.84□□□□□ -0.51
MDH1-215ENST00000539945 TTC41PQ6P2S7 1318 aa11.84□□□□□ -0.51
MDH1-215ENST00000539945 MFAP1P55081 439 aaKnown RBP11.84□□□□□ -0.51
MDH1-215ENST00000539945 RC3H1Q5TC82 1133 aaKnown RBP11.84□□□□□ -0.51
MDH1-215ENST00000539945 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
MDH1-215ENST00000539945 LINC00116Q8NCU8 138 aa11.84□□□□□ -0.51
MDH1-215ENST00000539945 ZFRQ96KR1 1074 aaKnown RBP11.84□□□□□ -0.51
MDH1-215ENST00000539945 LARP6Q9BRS8 491 aaKnown RBP11.84□□□□□ -0.51
MDH1-215ENST00000539945 PCDHGA10Q9Y5H3 936 aa11.84□□□□□ -0.51
MDH1-215ENST00000539945 CAMTA2O94983 1202 aa11.83□□□□□ -0.52
MDH1-215ENST00000539945 GPTP24298 496 aa11.83□□□□□ -0.52
MDH1-215ENST00000539945 RTL5Q5HYW3 569 aaPredicted RBP11.83□□□□□ -0.52
MDH1-215ENST00000539945 FAM182BQ5T319 152 aa11.83□□□□□ -0.52
MDH1-215ENST00000539945 CASC1Q6TDU7 716 aa11.83□□□□□ -0.52
MDH1-215ENST00000539945 KLHDC4Q8TBB5 520 aa11.83□□□□□ -0.52
MDH1-215ENST00000539945 PI4K2BQ8TCG2 481 aa11.83□□□□□ -0.52
MDH1-215ENST00000539945 C22orf23Q9BZE7 217 aa11.83□□□□□ -0.52
MDH1-215ENST00000539945 PHF14O94880 888 aa11.82□□□□□ -0.52
MDH1-215ENST00000539945 CSF1RP07333 972 aa11.82□□□□□ -0.52
MDH1-215ENST00000539945 TSHZ3Q63HK5 1081 aa11.82□□□□□ -0.52
MDH1-215ENST00000539945 ZNF772Q68DY9 489 aaPredicted RBP11.82□□□□□ -0.52
MDH1-215ENST00000539945 FAM89AQ96GI7 184 aa11.82□□□□□ -0.52
MDH1-215ENST00000539945 SIL1Q9H173 461 aa11.82□□□□□ -0.52
MDH1-215ENST00000539945 LY75O60449 1722 aa11.82□□□□□ -0.52
MDH1-215ENST00000539945 UBN2Q6ZU65 1347 aa11.81□□□□□ -0.52
MDH1-215ENST00000539945 IFIT2P09913 472 aaKnown RBP11.81□□□□□ -0.52
MDH1-215ENST00000539945 RBM25P49756 843 aaKnown RBP11.81□□□□□ -0.52
MDH1-215ENST00000539945 PARP10Q53GL7 1025 aa11.81□□□□□ -0.52
MDH1-215ENST00000539945 CLEC4GQ6UXB4 293 aa11.81□□□□□ -0.52
MDH1-215ENST00000539945 FAM196AQ6ZSG2 479 aa11.81□□□□□ -0.52
MDH1-215ENST00000539945 AACSQ86V21 672 aa11.81□□□□□ -0.52
MDH1-215ENST00000539945 EAF2Q96CJ1 260 aaPredicted RBP11.81□□□□□ -0.52
MDH1-215ENST00000539945 GPATCH3Q96I76 525 aa11.81□□□□□ -0.52
MDH1-215ENST00000539945 AK7Q96M32 723 aa11.81□□□□□ -0.52
MDH1-215ENST00000539945 ECHDC1Q9NTX5 307 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms