RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ATP6V0A2Q9Y487 856 aa19.11■□□□□ 0.65
DDB1-216ENST00000539739 IL15P40933 162 aaPredicted RBP19.1■□□□□ 0.65
DDB1-216ENST00000539739 LRRC24Q50LG9 513 aa19.1■□□□□ 0.65
DDB1-216ENST00000539739 WWC3Q9ULE0 1092 aa19.1■□□□□ 0.65
DDB1-216ENST00000539739 BCS1LQ9Y276 419 aa19.1■□□□□ 0.65
DDB1-216ENST00000539739 RIPOR2Q9Y4F9 1068 aa19.1■□□□□ 0.65
DDB1-216ENST00000539739 MROH5Q6ZUA9 1318 aa19.09■□□□□ 0.65
DDB1-216ENST00000539739 TAF1P21675 1872 aa19.09■□□□□ 0.65
DDB1-216ENST00000539739 SOGA3Q5TF21 947 aa19.09■□□□□ 0.65
DDB1-216ENST00000539739 CC2D2BQ6DHV5 1058 aa19.09■□□□□ 0.65
DDB1-216ENST00000539739 ZNF219Q9P2Y4 722 aaPredicted RBP19.09■□□□□ 0.65
DDB1-216ENST00000539739 MINPP1Q9UNW1 487 aa19.09■□□□□ 0.65
DDB1-216ENST00000539739 EXOC6BQ9Y2D4 811 aa19.09■□□□□ 0.65
DDB1-216ENST00000539739 SRCAPQ6ZRS2 3230 aa19.09■□□□□ 0.65
DDB1-216ENST00000539739 METTL24Q5JXM2 366 aa19.08■□□□□ 0.65
DDB1-216ENST00000539739 ERC1Q8IUD2 1116 aa19.08■□□□□ 0.65
DDB1-216ENST00000539739 ANKRD2Q9GZV1 360 aa19.08■□□□□ 0.65
DDB1-216ENST00000539739 DCTPP1Q9H773 170 aa19.08■□□□□ 0.65
DDB1-216ENST00000539739 PPP4R2Q9NY27 417 aa19.08■□□□□ 0.65
DDB1-216ENST00000539739 C21orf2O43822 256 aa19.07■□□□□ 0.64
DDB1-216ENST00000539739 RAB11FIP3O75154 756 aa19.07■□□□□ 0.64
DDB1-216ENST00000539739 CHRNDQ07001 517 aa19.07■□□□□ 0.64
DDB1-216ENST00000539739 GRIPAP1Q4V328 841 aa19.07■□□□□ 0.64
DDB1-216ENST00000539739 ATG9AQ7Z3C6 839 aa19.07■□□□□ 0.64
DDB1-216ENST00000539739 C7orf43Q8WVR3 580 aa19.07■□□□□ 0.64
DDB1-216ENST00000539739 GCC1Q96CN9 775 aa19.07■□□□□ 0.64
DDB1-216ENST00000539739 CCDC136Q96JN2 1154 aa19.07■□□□□ 0.64
DDB1-216ENST00000539739 CEP126Q9P2H0 1117 aa19.07■□□□□ 0.64
DDB1-216ENST00000539739 ANKIB1Q9P2G1 1089 aa19.07■□□□□ 0.64
DDB1-216ENST00000539739 SLX4Q8IY92 1834 aa19.06■□□□□ 0.64
DDB1-216ENST00000539739 COL4A1P02462 1669 aa19.06■□□□□ 0.64
DDB1-216ENST00000539739 IGHDP01880 384 aa19.06■□□□□ 0.64
DDB1-216ENST00000539739 CCDC93Q567U6 631 aa19.06■□□□□ 0.64
DDB1-216ENST00000539739 NSFL1CQ9UNZ2 370 aaKnown RBP19.06■□□□□ 0.64
DDB1-216ENST00000539739 RTKN2Q8IZC4 609 aa19.05■□□□□ 0.64
DDB1-216ENST00000539739 MPNDQ8N594 471 aa19.05■□□□□ 0.64
DDB1-216ENST00000539739 KIF1BPQ96EK5 621 aa19.05■□□□□ 0.64
DDB1-216ENST00000539739 XDHP47989 1333 aa19.05■□□□□ 0.64
DDB1-216ENST00000539739 CACNA1SQ13698 1873 aa19.05■□□□□ 0.64
DDB1-216ENST00000539739 DPP8Q6V1X1 898 aaPredicted RBP19.04■□□□□ 0.64
DDB1-216ENST00000539739 HELBQ8NG08 1087 aaPredicted RBP19.04■□□□□ 0.64
DDB1-216ENST00000539739 ZBTB47Q9UFB7 747 aaPredicted RBP19.04■□□□□ 0.64
DDB1-216ENST00000539739 BRCA1P38398 1863 aaKnown RBP19.04■□□□□ 0.64
DDB1-216ENST00000539739 SPEF2Q9C093 1822 aa19.04■□□□□ 0.64
DDB1-216ENST00000539739 APBB1O00213 710 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 PDE8BO95263 885 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 KCNJ4P48050 445 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 GPSM2P81274 684 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 OLFM4Q6UX06 510 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 PODXL2Q9NZ53 605 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 TAF5LO75529 589 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 SASH1O94885 1247 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 ATP2B4P23634 1241 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 TFCP2Q12800 502 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 RHPN1Q8TCX5 695 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 LRRCC1Q9C099 1032 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 GGA1Q9UJY5 639 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 AKAP2Q9Y2D5 859 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 LEMD3Q9Y2U8 911 aa19.03■□□□□ 0.64
DDB1-216ENST00000539739 VGLL2Q8N8G2 317 aa19.02■□□□□ 0.64
DDB1-216ENST00000539739 UBE4AQ14139 1066 aa19.01■□□□□ 0.63
DDB1-216ENST00000539739 PUM3Q15397 648 aaKnown RBP19.01■□□□□ 0.63
DDB1-216ENST00000539739 GPR162Q16538 588 aa19.01■□□□□ 0.63
DDB1-216ENST00000539739 SLC51AQ86UW1 340 aa19.01■□□□□ 0.63
DDB1-216ENST00000539739 SMC5Q8IY18 1101 aa19.01■□□□□ 0.63
DDB1-216ENST00000539739 SUPT20HQ8NEM7 779 aa19.01■□□□□ 0.63
DDB1-216ENST00000539739 C6orf229H3BNL8 230 aa19■□□□□ 0.63
DDB1-216ENST00000539739 UFL1O94874 794 aa19■□□□□ 0.63
DDB1-216ENST00000539739 B4GALNT3Q6L9W6 998 aa19■□□□□ 0.63
DDB1-216ENST00000539739 LRRC37AA6NMS7 1700 aa19■□□□□ 0.63
DDB1-216ENST00000539739 ZNF804BA4D1E1 1349 aa19■□□□□ 0.63
DDB1-216ENST00000539739 ANKRD45Q5TZF3 282 aa19■□□□□ 0.63
DDB1-216ENST00000539739 CENPQQ7L2Z9 268 aaPredicted RBP19■□□□□ 0.63
DDB1-216ENST00000539739 CLASRPQ8N2M8 674 aaKnown RBP19■□□□□ 0.63
DDB1-216ENST00000539739 EYA3Q99504 573 aa19■□□□□ 0.63
DDB1-216ENST00000539739 GPR108Q9NPR9 543 aa19■□□□□ 0.63
DDB1-216ENST00000539739 IFIT1P09914 478 aaKnown RBP18.99■□□□□ 0.63
DDB1-216ENST00000539739 SLC5A1P13866 664 aa18.99■□□□□ 0.63
DDB1-216ENST00000539739 ATP2B3Q16720 1220 aa18.99■□□□□ 0.63
DDB1-216ENST00000539739 TBC1D16Q8TBP0 767 aa18.99■□□□□ 0.63
DDB1-216ENST00000539739 LPIN2Q92539 896 aa18.99■□□□□ 0.63
DDB1-216ENST00000539739 PSMD1Q99460 953 aa18.99■□□□□ 0.63
DDB1-216ENST00000539739 IL1RAPL2Q9NP60 686 aa18.99■□□□□ 0.63
DDB1-216ENST00000539739 POLLQ9UGP5 575 aa18.99■□□□□ 0.63
DDB1-216ENST00000539739 YBX3P16989 372 aaKnown RBP eCLIP18.98■□□□□ 0.638e-12■□□□□ 9.5
DDB1-216ENST00000539739 FKBP4Q02790 459 aaKnown RBP eCLIP18.98■□□□□ 0.63
DDB1-216ENST00000539739 RTFDC1Q9BY42 306 aaPredicted RBP18.98■□□□□ 0.63
DDB1-216ENST00000539739 ARFGEF1Q9Y6D6 1849 aa18.98■□□□□ 0.63
DDB1-216ENST00000539739 DCAF8L1A6NGE4 600 aa18.97■□□□□ 0.63
DDB1-216ENST00000539739 GRIN3BO60391 1043 aa18.97■□□□□ 0.63
DDB1-216ENST00000539739 FGFR2P21802 821 aa18.97■□□□□ 0.63
DDB1-216ENST00000539739 TNNI3KQ59H18 835 aa18.97■□□□□ 0.63
DDB1-216ENST00000539739 ARHGAP27Q6ZUM4 889 aa18.97■□□□□ 0.63
DDB1-216ENST00000539739 NEUROD6Q96NK8 337 aa18.97■□□□□ 0.63
DDB1-216ENST00000539739 TAOK3Q9H2K8 898 aa18.97■□□□□ 0.63
DDB1-216ENST00000539739 FPGT-TNNI3KV9GXZ4 949 aa18.97■□□□□ 0.63
DDB1-216ENST00000539739 A0A1B0GUL7 405 aa18.96■□□□□ 0.63
DDB1-216ENST00000539739 SNAP23O00161 211 aa18.96■□□□□ 0.63
DDB1-216ENST00000539739 SMARCA5O60264 1052 aaPredicted RBP18.96■□□□□ 0.63
DDB1-216ENST00000539739 EIF5BO60841 1220 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms