RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 RFX5P48382 616 aaPredicted RBP15.9■□□□□ 0.14
TSPAN9-207ENST00000539631 GRIPAP1Q4V328 841 aa15.9■□□□□ 0.14
TSPAN9-207ENST00000539631 DPP8Q6V1X1 898 aaPredicted RBP15.9■□□□□ 0.14
TSPAN9-207ENST00000539631 KLHDC4Q8TBB5 520 aa15.9■□□□□ 0.14
TSPAN9-207ENST00000539631 MINPP1Q9UNW1 487 aa15.9■□□□□ 0.14
TSPAN9-207ENST00000539631 NSFL1CQ9UNZ2 370 aaKnown RBP15.9■□□□□ 0.14
TSPAN9-207ENST00000539631 SUPT16HQ9Y5B9 1047 aaKnown RBP15.9■□□□□ 0.14
TSPAN9-207ENST00000539631 TIAM2Q8IVF5 1701 aa15.9■□□□□ 0.14
TSPAN9-207ENST00000539631 PSMD1Q99460 953 aa15.89■□□□□ 0.13
TSPAN9-207ENST00000539631 ZNF277Q9NRM2 450 aaPredicted RBP15.89■□□□□ 0.13
TSPAN9-207ENST00000539631 LMNB1P20700 586 aa15.88■□□□□ 0.13
TSPAN9-207ENST00000539631 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
TSPAN9-207ENST00000539631 LDHAL6AQ6ZMR3 332 aa15.88■□□□□ 0.13
TSPAN9-207ENST00000539631 RTFDC1Q9BY42 306 aaPredicted RBP15.88■□□□□ 0.13
TSPAN9-207ENST00000539631 PUS3Q9BZE2 481 aaKnown RBP15.88■□□□□ 0.13
TSPAN9-207ENST00000539631 CNNM1Q9NRU3 951 aa15.88■□□□□ 0.13
TSPAN9-207ENST00000539631 RNF181Q9P0P0 153 aa15.88■□□□□ 0.13
TSPAN9-207ENST00000539631 PTPN12Q05209 780 aaKnown RBP15.87■□□□□ 0.13
TSPAN9-207ENST00000539631 MTX1Q13505 466 aa15.87■□□□□ 0.13
TSPAN9-207ENST00000539631 ZBTB40Q9NUA8 1239 aa15.87■□□□□ 0.13
TSPAN9-207ENST00000539631 PODXL2Q9NZ53 605 aa15.87■□□□□ 0.13
TSPAN9-207ENST00000539631 ANKIB1Q9P2G1 1089 aa15.87■□□□□ 0.13
TSPAN9-207ENST00000539631 POLLQ9UGP5 575 aa15.87■□□□□ 0.13
TSPAN9-207ENST00000539631 UTRNP46939 3433 aa15.86■□□□□ 0.13
TSPAN9-207ENST00000539631 PNMA6EA0A0J9YXQ4 647 aa15.86■□□□□ 0.13
TSPAN9-207ENST00000539631 C6orf229H3BNL8 230 aa15.86■□□□□ 0.13
TSPAN9-207ENST00000539631 SRGAP3O43295 1099 aa15.86■□□□□ 0.13
TSPAN9-207ENST00000539631 IARSP41252 1262 aaKnown RBP15.86■□□□□ 0.13
TSPAN9-207ENST00000539631 CHRNDQ07001 517 aa15.86■□□□□ 0.13
TSPAN9-207ENST00000539631 LRRC24Q50LG9 513 aa15.86■□□□□ 0.13
TSPAN9-207ENST00000539631 SUPT20HQ8NEM7 779 aa15.86■□□□□ 0.13
TSPAN9-207ENST00000539631 TBC1D16Q8TBP0 767 aa15.86■□□□□ 0.13
TSPAN9-207ENST00000539631 GPR101Q96P66 508 aaPredicted RBP15.86■□□□□ 0.13
TSPAN9-207ENST00000539631 PA2G4Q9UQ80 394 aaKnown RBP15.86■□□□□ 0.13
TSPAN9-207ENST00000539631 XDHP47989 1333 aa15.86■□□□□ 0.13
TSPAN9-207ENST00000539631 COL4A5P29400 1685 aa15.86■□□□□ 0.13
TSPAN9-207ENST00000539631 WTIPA6NIX2 430 aaPredicted RBP15.85■□□□□ 0.13
TSPAN9-207ENST00000539631 UFL1O94874 794 aa15.85■□□□□ 0.13
TSPAN9-207ENST00000539631 ATP2B4P23634 1241 aa15.85■□□□□ 0.13
TSPAN9-207ENST00000539631 ATP8B2P98198 1209 aa15.85■□□□□ 0.13
TSPAN9-207ENST00000539631 HELBQ8NG08 1087 aaPredicted RBP15.85■□□□□ 0.13
TSPAN9-207ENST00000539631 CRBNQ96SW2 442 aa15.85■□□□□ 0.13
TSPAN9-207ENST00000539631 ANKRD2Q9GZV1 360 aa15.85■□□□□ 0.13
TSPAN9-207ENST00000539631 CHMP4BQ9H444 224 aaKnown RBP15.85■□□□□ 0.13
TSPAN9-207ENST00000539631 GGA1Q9UJY5 639 aa15.85■□□□□ 0.13
TSPAN9-207ENST00000539631 RIPOR2Q9Y4F9 1068 aa15.85■□□□□ 0.13
TSPAN9-207ENST00000539631 PPIP5K2O43314 1243 aa15.84■□□□□ 0.13
TSPAN9-207ENST00000539631 TAF5LO75529 589 aa15.84■□□□□ 0.13
TSPAN9-207ENST00000539631 AOC3Q16853 763 aa15.84■□□□□ 0.13
TSPAN9-207ENST00000539631 CEP85Q6P2H3 762 aa15.84■□□□□ 0.13
TSPAN9-207ENST00000539631 SIL1Q9H173 461 aa15.84■□□□□ 0.13
TSPAN9-207ENST00000539631 EYA2O00167 538 aa15.83■□□□□ 0.12
TSPAN9-207ENST00000539631 RIMBP2O15034 1052 aa15.83■□□□□ 0.12
TSPAN9-207ENST00000539631 POLA2Q14181 598 aa15.83■□□□□ 0.12
TSPAN9-207ENST00000539631 COPRSQ9NQ92 184 aa15.83■□□□□ 0.12
TSPAN9-207ENST00000539631 SNAP23O00161 211 aa15.82■□□□□ 0.12
TSPAN9-207ENST00000539631 KIAA2012Q0VF49 1180 aa15.82■□□□□ 0.12
TSPAN9-207ENST00000539631 WASHC4Q2M389 1173 aa15.82■□□□□ 0.12
TSPAN9-207ENST00000539631 ATG9AQ7Z3C6 839 aa15.82■□□□□ 0.12
TSPAN9-207ENST00000539631 LARGE2Q8N3Y3 721 aa15.82■□□□□ 0.12
TSPAN9-207ENST00000539631 SSH3Q8TE77 659 aa15.82■□□□□ 0.12
TSPAN9-207ENST00000539631 EYA3Q99504 573 aa15.82■□□□□ 0.12
TSPAN9-207ENST00000539631 VPS33BQ9H267 617 aa15.82■□□□□ 0.12
TSPAN9-207ENST00000539631 LEMD3Q9Y2U8 911 aa15.82■□□□□ 0.12
TSPAN9-207ENST00000539631 MROH5Q6ZUA9 1318 aa15.82■□□□□ 0.12
TSPAN9-207ENST00000539631 ZNF804BA4D1E1 1349 aa15.81■□□□□ 0.12
TSPAN9-207ENST00000539631 METTL24Q5JXM2 366 aa15.81■□□□□ 0.12
TSPAN9-207ENST00000539631 FBXO3Q9UK99 471 aa15.81■□□□□ 0.12
TSPAN9-207ENST00000539631 CIAO1O76071 339 aa15.8■□□□□ 0.12
TSPAN9-207ENST00000539631 KCNJ4P48050 445 aa15.8■□□□□ 0.12
TSPAN9-207ENST00000539631 RPAP2Q8IXW5 612 aaPredicted RBP15.8■□□□□ 0.12
TSPAN9-207ENST00000539631 NIM1KQ8IY84 436 aa15.8■□□□□ 0.12
TSPAN9-207ENST00000539631 VGLL2Q8N8G2 317 aa15.8■□□□□ 0.12
TSPAN9-207ENST00000539631 JDP2Q8WYK2 163 aa15.8■□□□□ 0.12
TSPAN9-207ENST00000539631 ZC3H12CQ9C0D7 883 aaKnown RBP15.8■□□□□ 0.12
TSPAN9-207ENST00000539631 MED23Q9ULK4 1368 aa15.79■□□□□ 0.12
TSPAN9-207ENST00000539631 KLRK1P26718 216 aa15.79■□□□□ 0.12
TSPAN9-207ENST00000539631 IL15P40933 162 aaPredicted RBP15.79■□□□□ 0.12
TSPAN9-207ENST00000539631 DOK7Q18PE1 504 aa15.79■□□□□ 0.12
TSPAN9-207ENST00000539631 TXNRD3Q86VQ6 643 aa15.79■□□□□ 0.12
TSPAN9-207ENST00000539631 SIRT2Q8IXJ6 389 aa15.79■□□□□ 0.12
TSPAN9-207ENST00000539631 ZC3H4Q9UPT8 1303 aaKnown RBP15.78■□□□□ 0.12
TSPAN9-207ENST00000539631 IRS2Q9Y4H2 1338 aa15.78■□□□□ 0.12
TSPAN9-207ENST00000539631 FZD9O00144 591 aa15.78■□□□□ 0.12
TSPAN9-207ENST00000539631 PDE8BO95263 885 aa15.78■□□□□ 0.12
TSPAN9-207ENST00000539631 IRX6P78412 446 aaPredicted RBP15.78■□□□□ 0.12
TSPAN9-207ENST00000539631 EXOC6Q8TAG9 804 aa15.78■□□□□ 0.12
TSPAN9-207ENST00000539631 DBNDD1Q9H9R9 158 aa15.78■□□□□ 0.12
TSPAN9-207ENST00000539631 SCN9AQ15858 1988 aa15.78■□□□□ 0.12
TSPAN9-207ENST00000539631 PSME4Q14997 1843 aa15.78■□□□□ 0.12
TSPAN9-207ENST00000539631 ZNF541Q9H0D2 1346 aa15.77■□□□□ 0.12
TSPAN9-207ENST00000539631 YDJCA8MPS7 323 aa15.77■□□□□ 0.12
TSPAN9-207ENST00000539631 SURF6O75683 361 aaKnown RBP15.77■□□□□ 0.12
TSPAN9-207ENST00000539631 G3BP1Q13283 466 aaKnown RBP eCLIP15.77■□□□□ 0.12
TSPAN9-207ENST00000539631 UBE4AQ14139 1066 aa15.77■□□□□ 0.12
TSPAN9-207ENST00000539631 CEP126Q9P2H0 1117 aa15.77■□□□□ 0.12
TSPAN9-207ENST00000539631 ARAP2Q8WZ64 1704 aa15.77■□□□□ 0.11
TSPAN9-207ENST00000539631 ZNF646O15015 1829 aaPredicted RBP15.76■□□□□ 0.11
TSPAN9-207ENST00000539631 G3V3G9 751 aa15.76■□□□□ 0.11
TSPAN9-207ENST00000539631 ECE2O60344 883 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms