RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 PUS3Q9BZE2 481 aaKnown RBP19.79■□□□□ 0.76
RPAIN-206ENST00000539417 A0A1B0GUL6 1792 aa19.79■□□□□ 0.76
RPAIN-206ENST00000539417 ZNF541Q9H0D2 1346 aa19.79■□□□□ 0.76
RPAIN-206ENST00000539417 PPIP5K2O43314 1243 aa19.79■□□□□ 0.76
RPAIN-206ENST00000539417 CCDC57Q2TAC2 916 aa19.79■□□□□ 0.76
RPAIN-206ENST00000539417 C20orf194Q5TEA3 1177 aa19.79■□□□□ 0.76
RPAIN-206ENST00000539417 FTSJ3Q8IY81 847 aaKnown RBP19.79■□□□□ 0.76
RPAIN-206ENST00000539417 PODXL2Q9NZ53 605 aa19.79■□□□□ 0.76
RPAIN-206ENST00000539417 C6orf229H3BNL8 230 aa19.78■□□□□ 0.76
RPAIN-206ENST00000539417 SNAP23O00161 211 aa19.78■□□□□ 0.76
RPAIN-206ENST00000539417 RIMBP2O15034 1052 aa19.78■□□□□ 0.76
RPAIN-206ENST00000539417 RFX5P48382 616 aaPredicted RBP19.78■□□□□ 0.76
RPAIN-206ENST00000539417 LARGE2Q8N3Y3 721 aa19.78■□□□□ 0.76
RPAIN-206ENST00000539417 HELBQ8NG08 1087 aaPredicted RBP19.78■□□□□ 0.76
RPAIN-206ENST00000539417 ANKIB1Q9P2G1 1089 aa19.78■□□□□ 0.76
RPAIN-206ENST00000539417 UFL1O94874 794 aa19.77■□□□□ 0.76
RPAIN-206ENST00000539417 ITPRIPQ8IWB1 547 aa19.77■□□□□ 0.76
RPAIN-206ENST00000539417 MPHOSPH8Q99549 860 aa19.77■□□□□ 0.76
RPAIN-206ENST00000539417 CHRNDQ07001 517 aa19.76■□□□□ 0.75
RPAIN-206ENST00000539417 KIAA2012Q0VF49 1180 aa19.76■□□□□ 0.75
RPAIN-206ENST00000539417 LRRC24Q50LG9 513 aa19.76■□□□□ 0.75
RPAIN-206ENST00000539417 SUPT20HQ8NEM7 779 aa19.76■□□□□ 0.75
RPAIN-206ENST00000539417 NMRK2Q9NPI5 230 aa19.76■□□□□ 0.75
RPAIN-206ENST00000539417 XDHP47989 1333 aa19.76■□□□□ 0.75
RPAIN-206ENST00000539417 FZD9O00144 591 aa19.75■□□□□ 0.75
RPAIN-206ENST00000539417 ZBTB7BO15156 539 aaPredicted RBP19.75■□□□□ 0.75
RPAIN-206ENST00000539417 TAF5LO75529 589 aa19.75■□□□□ 0.75
RPAIN-206ENST00000539417 DDNO94850 711 aaPredicted RBP19.75■□□□□ 0.75
RPAIN-206ENST00000539417 KLRK1P26718 216 aa19.75■□□□□ 0.75
RPAIN-206ENST00000539417 TAF7LQ5H9L4 462 aa19.75■□□□□ 0.75
RPAIN-206ENST00000539417 LDHAL6AQ6ZMR3 332 aa19.75■□□□□ 0.75
RPAIN-206ENST00000539417 C1orf115Q9H7X2 142 aa19.75■□□□□ 0.75
RPAIN-206ENST00000539417 GGA1Q9UJY5 639 aa19.75■□□□□ 0.75
RPAIN-206ENST00000539417 ZC3H4Q9UPT8 1303 aaKnown RBP19.75■□□□□ 0.75
RPAIN-206ENST00000539417 GLTPD2A6NH11 291 aa19.74■□□□□ 0.75
RPAIN-206ENST00000539417 YDJCA8MPS7 323 aa19.74■□□□□ 0.75
RPAIN-206ENST00000539417 GNAI3P08754 354 aa19.74■□□□□ 0.75
RPAIN-206ENST00000539417 WASHC4Q2M389 1173 aa19.74■□□□□ 0.75
RPAIN-206ENST00000539417 PTPN12Q05209 780 aaKnown RBP19.73■□□□□ 0.75
RPAIN-206ENST00000539417 DOK7Q18PE1 504 aa19.73■□□□□ 0.75
RPAIN-206ENST00000539417 TXNRD3Q86VQ6 643 aa19.73■□□□□ 0.75
RPAIN-206ENST00000539417 DBNDD1Q9H9R9 158 aa19.73■□□□□ 0.75
RPAIN-206ENST00000539417 COG6Q9Y2V7 657 aa19.73■□□□□ 0.75
RPAIN-206ENST00000539417 POTECB2RU33 542 aa19.73■□□□□ 0.75
RPAIN-206ENST00000539417 JDP2Q8WYK2 163 aa19.73■□□□□ 0.75
RPAIN-206ENST00000539417 GPBP1L1Q9HC44 474 aaPredicted RBP19.73■□□□□ 0.75
RPAIN-206ENST00000539417 KCNQ5Q9NR82 932 aa19.73■□□□□ 0.75
RPAIN-206ENST00000539417 CNNM1Q9NRU3 951 aa19.73■□□□□ 0.75
RPAIN-206ENST00000539417 PA2G4Q9UQ80 394 aaKnown RBP19.73■□□□□ 0.75
RPAIN-206ENST00000539417 RIPOR2Q9Y4F9 1068 aa19.73■□□□□ 0.75
RPAIN-206ENST00000539417 ATP2B4P23634 1241 aa19.72■□□□□ 0.75
RPAIN-206ENST00000539417 NIM1KQ8IY84 436 aa19.72■□□□□ 0.75
RPAIN-206ENST00000539417 VPS33BQ9H267 617 aa19.72■□□□□ 0.75
RPAIN-206ENST00000539417 GNAI2P04899 355 aa19.71■□□□□ 0.75
RPAIN-206ENST00000539417 RRAGCQ9HB90 399 aa19.71■□□□□ 0.75
RPAIN-206ENST00000539417 IRS2Q9Y4H2 1338 aa19.71■□□□□ 0.74
RPAIN-206ENST00000539417 PNMA6EA0A0J9YXQ4 647 aa19.7■□□□□ 0.74
RPAIN-206ENST00000539417 KIF3CO14782 793 aa19.7■□□□□ 0.74
RPAIN-206ENST00000539417 CXCL9Q07325 125 aa19.7■□□□□ 0.74
RPAIN-206ENST00000539417 MVPQ14764 893 aaKnown RBP19.7■□□□□ 0.74
RPAIN-206ENST00000539417 EYA3Q99504 573 aa19.7■□□□□ 0.74
RPAIN-206ENST00000539417 ANKRD2Q9GZV1 360 aa19.7■□□□□ 0.74
RPAIN-206ENST00000539417 ZNRF3Q9ULT6 936 aa19.7■□□□□ 0.74
RPAIN-206ENST00000539417 ZNF804BA4D1E1 1349 aa19.7■□□□□ 0.74
RPAIN-206ENST00000539417 SCN9AQ15858 1988 aa19.69■□□□□ 0.74
RPAIN-206ENST00000539417 ATG9AQ7Z3C6 839 aa19.69■□□□□ 0.74
RPAIN-206ENST00000539417 ZC3H12CQ9C0D7 883 aaKnown RBP19.69■□□□□ 0.74
RPAIN-206ENST00000539417 SIL1Q9H173 461 aa19.69■□□□□ 0.74
RPAIN-206ENST00000539417 WDR90Q96KV7 1748 aa19.68■□□□□ 0.74
RPAIN-206ENST00000539417 SRGAP3O43295 1099 aa19.68■□□□□ 0.74
RPAIN-206ENST00000539417 ECE2O60344 883 aa19.68■□□□□ 0.74
RPAIN-206ENST00000539417 RAD17O75943 681 aa19.68■□□□□ 0.74
RPAIN-206ENST00000539417 MTX1Q13505 466 aa19.68■□□□□ 0.74
RPAIN-206ENST00000539417 LEMD3Q9Y2U8 911 aa19.68■□□□□ 0.74
RPAIN-206ENST00000539417 GJA3Q9Y6H8 435 aa19.68■□□□□ 0.74
RPAIN-206ENST00000539417 KDM2BQ8NHM5 1336 aa19.68■□□□□ 0.74
RPAIN-206ENST00000539417 MED23Q9ULK4 1368 aa19.68■□□□□ 0.74
RPAIN-206ENST00000539417 DPY19L2Q6NUT2 758 aa19.67■□□□□ 0.74
RPAIN-206ENST00000539417 VGLL2Q8N8G2 317 aa19.67■□□□□ 0.74
RPAIN-206ENST00000539417 EYA2O00167 538 aa19.67■□□□□ 0.74
RPAIN-206ENST00000539417 RRP1P56182 461 aaKnown RBP19.67■□□□□ 0.74
RPAIN-206ENST00000539417 EIF6P56537 245 aaKnown RBP19.67■□□□□ 0.74
RPAIN-206ENST00000539417 HDAC5Q9UQL6 1122 aa19.67■□□□□ 0.74
RPAIN-206ENST00000539417 MS4A1P11836 297 aa19.66■□□□□ 0.74
RPAIN-206ENST00000539417 PDE3AQ14432 1141 aa19.66■□□□□ 0.74
RPAIN-206ENST00000539417 METTL24Q5JXM2 366 aa19.66■□□□□ 0.74
RPAIN-206ENST00000539417 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.66■□□□□ 0.74
RPAIN-206ENST00000539417 KCNJ4P48050 445 aa19.65■□□□□ 0.74
RPAIN-206ENST00000539417 GPC2Q8N158 579 aa19.65■□□□□ 0.74
RPAIN-206ENST00000539417 COPRSQ9NQ92 184 aa19.65■□□□□ 0.74
RPAIN-206ENST00000539417 MROH5Q6ZUA9 1318 aa19.65■□□□□ 0.74
RPAIN-206ENST00000539417 ATP8B2P98198 1209 aa19.64■□□□□ 0.73
RPAIN-206ENST00000539417 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.64■□□□□ 0.73
RPAIN-206ENST00000539417 L3MBTL3Q96JM7 780 aaPredicted RBP19.64■□□□□ 0.73
RPAIN-206ENST00000539417 ZBTB40Q9NUA8 1239 aa19.64■□□□□ 0.73
RPAIN-206ENST00000539417 ZBTB12Q9Y330 459 aaPredicted RBP19.64■□□□□ 0.73
RPAIN-206ENST00000539417 ZNF646O15015 1829 aaPredicted RBP19.64■□□□□ 0.73
RPAIN-206ENST00000539417 SHTN1A0MZ66 631 aa19.63■□□□□ 0.73
RPAIN-206ENST00000539417 PSMD14O00487 310 aa19.63■□□□□ 0.73
RPAIN-206ENST00000539417 PDE8BO95263 885 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms