RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 CEP126Q9P2H0 1117 aa10.64□□□□□ -0.71
LPCAT3-208ENST00000538987 NSFL1CQ9UNZ2 370 aaKnown RBP10.64□□□□□ -0.71
LPCAT3-208ENST00000538987 DDX60Q8IY21 1712 aaKnown RBP10.64□□□□□ -0.71
LPCAT3-208ENST00000538987 MROH5Q6ZUA9 1318 aa10.63□□□□□ -0.71
LPCAT3-208ENST00000538987 RAB11FIP3O75154 756 aa10.63□□□□□ -0.71
LPCAT3-208ENST00000538987 CIAO1O76071 339 aa10.63□□□□□ -0.71
LPCAT3-208ENST00000538987 CHRNDQ07001 517 aa10.63□□□□□ -0.71
LPCAT3-208ENST00000538987 ANKRD45Q5TZF3 282 aa10.63□□□□□ -0.71
LPCAT3-208ENST00000538987 SP8Q8IXZ3 490 aa10.63□□□□□ -0.71
LPCAT3-208ENST00000538987 ANKRD2Q9GZV1 360 aa10.63□□□□□ -0.71
LPCAT3-208ENST00000538987 FBXO3Q9UK99 471 aa10.63□□□□□ -0.71
LPCAT3-208ENST00000538987 MINPP1Q9UNW1 487 aa10.63□□□□□ -0.71
LPCAT3-208ENST00000538987 NOP58Q9Y2X3 529 aaKnown RBP10.63□□□□□ -0.71
LPCAT3-208ENST00000538987 ATP6V0A2Q9Y487 856 aa10.63□□□□□ -0.71
LPCAT3-208ENST00000538987 C6orf229H3BNL8 230 aa10.62□□□□□ -0.71
LPCAT3-208ENST00000538987 TAF5LO75529 589 aa10.62□□□□□ -0.71
LPCAT3-208ENST00000538987 TFCP2Q12800 502 aa10.62□□□□□ -0.71
LPCAT3-208ENST00000538987 ATG9AQ7Z3C6 839 aa10.62□□□□□ -0.71
LPCAT3-208ENST00000538987 KIF1BPQ96EK5 621 aa10.62□□□□□ -0.71
LPCAT3-208ENST00000538987 LRRCC1Q9C099 1032 aa10.62□□□□□ -0.71
LPCAT3-208ENST00000538987 RIPOR2Q9Y4F9 1068 aa10.62□□□□□ -0.71
LPCAT3-208ENST00000538987 TNRC6CQ9HCJ0 1690 aaKnown RBP10.62□□□□□ -0.71
LPCAT3-208ENST00000538987 GPSM2P81274 684 aa10.61□□□□□ -0.71
LPCAT3-208ENST00000538987 SOGA3Q5TF21 947 aa10.61□□□□□ -0.71
LPCAT3-208ENST00000538987 CC2D2BQ6DHV5 1058 aa10.61□□□□□ -0.71
LPCAT3-208ENST00000538987 OLFM4Q6UX06 510 aa10.61□□□□□ -0.71
LPCAT3-208ENST00000538987 DPP8Q6V1X1 898 aaPredicted RBP10.61□□□□□ -0.71
LPCAT3-208ENST00000538987 CENPQQ7L2Z9 268 aaPredicted RBP10.61□□□□□ -0.71
LPCAT3-208ENST00000538987 CLASRPQ8N2M8 674 aaKnown RBP10.61□□□□□ -0.71
LPCAT3-208ENST00000538987 MPNDQ8N594 471 aa10.61□□□□□ -0.71
LPCAT3-208ENST00000538987 RHPN1Q8TCX5 695 aa10.61□□□□□ -0.71
LPCAT3-208ENST00000538987 NEUROD6Q96NK8 337 aa10.61□□□□□ -0.71
LPCAT3-208ENST00000538987 IL1RAPL2Q9NP60 686 aa10.61□□□□□ -0.71
LPCAT3-208ENST00000538987 AKAP2Q9Y2D5 859 aa10.61□□□□□ -0.71
LPCAT3-208ENST00000538987 LAMB2P55268 1798 aa10.6□□□□□ -0.71
LPCAT3-208ENST00000538987 DCAF8L1A6NGE4 600 aa10.6□□□□□ -0.71
LPCAT3-208ENST00000538987 SMARCA5O60264 1052 aaPredicted RBP10.6□□□□□ -0.71
LPCAT3-208ENST00000538987 SASH1O94885 1247 aa10.6□□□□□ -0.71
LPCAT3-208ENST00000538987 PDE8BO95263 885 aa10.6□□□□□ -0.71
LPCAT3-208ENST00000538987 ATP2B4P23634 1241 aa10.6□□□□□ -0.71
LPCAT3-208ENST00000538987 GPR162Q16538 588 aa10.6□□□□□ -0.71
LPCAT3-208ENST00000538987 CCDC93Q567U6 631 aa10.6□□□□□ -0.71
LPCAT3-208ENST00000538987 GORABQ5T7V8 394 aa10.6□□□□□ -0.71
LPCAT3-208ENST00000538987 RTKN2Q8IZC4 609 aa10.6□□□□□ -0.71
LPCAT3-208ENST00000538987 GGA1Q9UJY5 639 aa10.6□□□□□ -0.71
LPCAT3-208ENST00000538987 XDHP47989 1333 aa10.59□□□□□ -0.71
LPCAT3-208ENST00000538987 ANKRD31Q8N7Z5 1873 aa10.59□□□□□ -0.71
LPCAT3-208ENST00000538987 G3V3G9 751 aa10.59□□□□□ -0.71
LPCAT3-208ENST00000538987 UFL1O94874 794 aa10.59□□□□□ -0.71
LPCAT3-208ENST00000538987 IFIT2P09913 472 aaKnown RBP10.59□□□□□ -0.71
LPCAT3-208ENST00000538987 TIMM10P62072 90 aa10.59□□□□□ -0.71
LPCAT3-208ENST00000538987 PUM3Q15397 648 aaKnown RBP10.59□□□□□ -0.71
LPCAT3-208ENST00000538987 ATP2B3Q16720 1220 aa10.59□□□□□ -0.71
LPCAT3-208ENST00000538987 GRIPAP1Q4V328 841 aa10.59□□□□□ -0.71
LPCAT3-208ENST00000538987 DCAF8Q5TAQ9 597 aa10.59□□□□□ -0.71
LPCAT3-208ENST00000538987 ARHGAP27Q6ZUM4 889 aa10.59□□□□□ -0.71
LPCAT3-208ENST00000538987 SMC5Q8IY18 1101 aa10.59□□□□□ -0.71
LPCAT3-208ENST00000538987 LEMD3Q9Y2U8 911 aa10.59□□□□□ -0.71
LPCAT3-208ENST00000538987 ZNF804BA4D1E1 1349 aa10.58□□□□□ -0.71
LPCAT3-208ENST00000538987 MYH3P11055 1940 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 A0A1B0GUL7 405 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 SNAP23O00161 211 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 RIMBP2O15034 1052 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 IFIT1P09914 478 aaKnown RBP10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 SLC5A1P13866 664 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 CAVIN4Q5BKX8 364 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 SLC51AQ86UW1 340 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 AACSQ86V21 672 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 CHD1LQ86WJ1 897 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 VPS37DQ86XT2 251 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 SUPT20HQ8NEM7 779 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 C7orf43Q8WVR3 580 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 LPIN2Q92539 896 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 EYA3Q99504 573 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 ZC3H12CQ9C0D7 883 aaKnown RBP10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 LNPKQ9C0E8 428 aa10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 CCDC8Q9H0W5 538 aaPredicted RBP10.58□□□□□ -0.72
LPCAT3-208ENST00000538987 WTIPA6NIX2 430 aaPredicted RBP10.57□□□□□ -0.72
LPCAT3-208ENST00000538987 NUCB1Q02818 461 aa10.57□□□□□ -0.72
LPCAT3-208ENST00000538987 UBE4AQ14139 1066 aa10.57□□□□□ -0.72
LPCAT3-208ENST00000538987 WASHC4Q2M389 1173 aa10.57□□□□□ -0.72
LPCAT3-208ENST00000538987 TNNI3KQ59H18 835 aa10.57□□□□□ -0.72
LPCAT3-208ENST00000538987 TBC1D16Q8TBP0 767 aa10.57□□□□□ -0.72
LPCAT3-208ENST00000538987 GPR108Q9NPR9 543 aa10.57□□□□□ -0.72
LPCAT3-208ENST00000538987 PODXL2Q9NZ53 605 aa10.57□□□□□ -0.72
LPCAT3-208ENST00000538987 POLLQ9UGP5 575 aa10.57□□□□□ -0.72
LPCAT3-208ENST00000538987 FPGT-TNNI3KV9GXZ4 949 aa10.57□□□□□ -0.72
LPCAT3-208ENST00000538987 FRAT2O75474 233 aaPredicted RBP10.56□□□□□ -0.72
LPCAT3-208ENST00000538987 FKBP4Q02790 459 aaKnown RBP eCLIP10.56□□□□□ -0.72
LPCAT3-208ENST00000538987 CCDC158Q5M9N0 1113 aa10.56□□□□□ -0.72
LPCAT3-208ENST00000538987 C16orf71Q8IYS4 520 aaPredicted RBP10.56□□□□□ -0.72
LPCAT3-208ENST00000538987 VGLL2Q8N8G2 317 aa10.56□□□□□ -0.72
LPCAT3-208ENST00000538987 EAF2Q96CJ1 260 aaPredicted RBP10.56□□□□□ -0.72
LPCAT3-208ENST00000538987 GPR101Q96P66 508 aaPredicted RBP10.56□□□□□ -0.72
LPCAT3-208ENST00000538987 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.56□□□□□ -0.72
LPCAT3-208ENST00000538987 KIF13BQ9NQT8 1826 aa10.56□□□□□ -0.72
LPCAT3-208ENST00000538987 KDM2BQ8NHM5 1336 aa10.56□□□□□ -0.72
LPCAT3-208ENST00000538987 COL11A2P13942 1736 aaPredicted RBP10.55□□□□□ -0.72
LPCAT3-208ENST00000538987 TAF1P21675 1872 aa10.55□□□□□ -0.72
LPCAT3-208ENST00000538987 COL4A1P02462 1669 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms