RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 XDHP47989 1333 aa17.32■□□□□ 0.36
CD9-208ENST00000538834 IRS2Q9Y4H2 1338 aa17.32■□□□□ 0.36
CD9-208ENST00000538834 YDJCA8MPS7 323 aa17.32■□□□□ 0.36
CD9-208ENST00000538834 PPIP5K2O43314 1243 aa17.32■□□□□ 0.36
CD9-208ENST00000538834 TRIM27P14373 513 aa17.32■□□□□ 0.36
CD9-208ENST00000538834 VEGFAP15692 232 aaPredicted RBP17.32■□□□□ 0.36
CD9-208ENST00000538834 GPC2Q8N158 579 aa17.32■□□□□ 0.36
CD9-208ENST00000538834 LARGE2Q8N3Y3 721 aa17.32■□□□□ 0.36
CD9-208ENST00000538834 JDP2Q8WYK2 163 aa17.32■□□□□ 0.36
CD9-208ENST00000538834 TOMM70O94826 608 aa17.31■□□□□ 0.36
CD9-208ENST00000538834 ATF7IPQ6VMQ6 1270 aa17.31■□□□□ 0.36
CD9-208ENST00000538834 ZNRF3Q9ULT6 936 aa17.31■□□□□ 0.36
CD9-208ENST00000538834 ANKRD18BA2A2Z9 1011 aa17.3■□□□□ 0.36
CD9-208ENST00000538834 WTIPA6NIX2 430 aaPredicted RBP17.3■□□□□ 0.36
CD9-208ENST00000538834 CXCL9Q07325 125 aa17.3■□□□□ 0.36
CD9-208ENST00000538834 WASHC4Q2M389 1173 aa17.3■□□□□ 0.36
CD9-208ENST00000538834 RBM46Q8TBY0 533 aaKnown RBP17.3■□□□□ 0.36
CD9-208ENST00000538834 BICC1Q9H694 974 aaKnown RBP17.3■□□□□ 0.36
CD9-208ENST00000538834 TNNQ9UQP3 1299 aa17.3■□□□□ 0.36
CD9-208ENST00000538834 ZNF609O15014 1411 aa17.3■□□□□ 0.36
CD9-208ENST00000538834 IPO8O15397 1037 aaKnown RBP17.29■□□□□ 0.36
CD9-208ENST00000538834 ATP2B4P23634 1241 aa17.29■□□□□ 0.36
CD9-208ENST00000538834 IFIT5Q13325 482 aaKnown RBP17.29■□□□□ 0.36
CD9-208ENST00000538834 NIM1KQ8IY84 436 aa17.29■□□□□ 0.36
CD9-208ENST00000538834 IGHMBP2P38935 993 aaKnown RBP17.28■□□□□ 0.36
CD9-208ENST00000538834 RFX5P48382 616 aaPredicted RBP17.28■□□□□ 0.36
CD9-208ENST00000538834 C15orf52Q6ZUT6 534 aaKnown RBP17.28■□□□□ 0.36
CD9-208ENST00000538834 GGA1Q9UJY5 639 aa17.28■□□□□ 0.36
CD9-208ENST00000538834 LEMD3Q9Y2U8 911 aa17.28■□□□□ 0.36
CD9-208ENST00000538834 MED23Q9ULK4 1368 aa17.28■□□□□ 0.36
CD9-208ENST00000538834 SCNN1DP51172 638 aa17.27■□□□□ 0.36
CD9-208ENST00000538834 EYA3Q99504 573 aa17.27■□□□□ 0.36
CD9-208ENST00000538834 RIPOR2Q9Y4F9 1068 aa17.27■□□□□ 0.36
CD9-208ENST00000538834 C6orf229H3BNL8 230 aa17.26■□□□□ 0.35
CD9-208ENST00000538834 UFL1O94874 794 aa17.26■□□□□ 0.35
CD9-208ENST00000538834 EIF6P56537 245 aaKnown RBP17.26■□□□□ 0.35
CD9-208ENST00000538834 CHRNDQ07001 517 aa17.26■□□□□ 0.35
CD9-208ENST00000538834 GPR101Q96P66 508 aaPredicted RBP17.26■□□□□ 0.35
CD9-208ENST00000538834 ANKRD2Q9GZV1 360 aa17.26■□□□□ 0.35
CD9-208ENST00000538834 TAF1DQ9H5J8 278 aaPredicted RBP17.26■□□□□ 0.35
CD9-208ENST00000538834 ANKIB1Q9P2G1 1089 aa17.26■□□□□ 0.35
CD9-208ENST00000538834 CEP350Q5VT06 3117 aa17.25■□□□□ 0.35
CD9-208ENST00000538834 CCDC57Q2TAC2 916 aa17.25■□□□□ 0.35
CD9-208ENST00000538834 ZKSCAN2Q63HK3 967 aa17.25■□□□□ 0.35
CD9-208ENST00000538834 TXNRD3Q86VQ6 643 aa17.25■□□□□ 0.35
CD9-208ENST00000538834 ZNF594Q96JF6 807 aaPredicted RBP17.25■□□□□ 0.35
CD9-208ENST00000538834 MPHOSPH8Q99549 860 aa17.25■□□□□ 0.35
CD9-208ENST00000538834 MEIS3Q99687 375 aa17.25■□□□□ 0.35
CD9-208ENST00000538834 TRPM7Q96QT4 1865 aa17.24■□□□□ 0.35
CD9-208ENST00000538834 IQCA1LA6NCM1 817 aa17.24■□□□□ 0.35
CD9-208ENST00000538834 FSTL1Q12841 308 aa17.24■□□□□ 0.35
CD9-208ENST00000538834 MTX1Q13505 466 aa17.24■□□□□ 0.35
CD9-208ENST00000538834 CIAPIN1Q6FI81 312 aa17.24■□□□□ 0.35
CD9-208ENST00000538834 PUS3Q9BZE2 481 aaKnown RBP17.24■□□□□ 0.35
CD9-208ENST00000538834 ZC3H12CQ9C0D7 883 aaKnown RBP17.24■□□□□ 0.35
CD9-208ENST00000538834 KCNQ5Q9NR82 932 aa17.24■□□□□ 0.35
CD9-208ENST00000538834 RIMBP2O15034 1052 aa17.23■□□□□ 0.35
CD9-208ENST00000538834 ECE2O60344 883 aa17.23■□□□□ 0.35
CD9-208ENST00000538834 VIL1P09327 827 aaKnown RBP17.23■□□□□ 0.35
CD9-208ENST00000538834 RLBP1P12271 317 aa17.23■□□□□ 0.35
CD9-208ENST00000538834 LDHAL6AQ6ZMR3 332 aa17.23■□□□□ 0.35
CD9-208ENST00000538834 VGLL2Q8N8G2 317 aa17.23■□□□□ 0.35
CD9-208ENST00000538834 DBNDD1Q9H9R9 158 aa17.23■□□□□ 0.35
CD9-208ENST00000538834 HACL1Q9UJ83 578 aa17.23■□□□□ 0.35
CD9-208ENST00000538834 ZNF804BA4D1E1 1349 aa17.22■□□□□ 0.35
CD9-208ENST00000538834 MYH13Q9UKX3 1938 aa17.22■□□□□ 0.35
CD9-208ENST00000538834 UBTFL1P0CB47 393 aaPredicted RBP17.22■□□□□ 0.35
CD9-208ENST00000538834 POTEIP0CG38 1075 aa17.22■□□□□ 0.35
CD9-208ENST00000538834 POTEJP0CG39 1038 aa17.22■□□□□ 0.35
CD9-208ENST00000538834 PTPN12Q05209 780 aaKnown RBP17.22■□□□□ 0.35
CD9-208ENST00000538834 TNIP1Q15025 636 aa17.22■□□□□ 0.35
CD9-208ENST00000538834 PODNQ7Z5L7 613 aa17.22■□□□□ 0.35
CD9-208ENST00000538834 TMEM57Q8N5G2 664 aa17.22■□□□□ 0.35
CD9-208ENST00000538834 DPF2Q92785 391 aa17.22■□□□□ 0.35
CD9-208ENST00000538834 GMLQ99445 158 aa17.22■□□□□ 0.35
CD9-208ENST00000538834 GPRC5DQ9NZD1 345 aa17.22■□□□□ 0.35
CD9-208ENST00000538834 ARAP2Q8WZ64 1704 aa17.21■□□□□ 0.35
CD9-208ENST00000538834 PSMD14O00487 310 aa17.21■□□□□ 0.35
CD9-208ENST00000538834 GNAI3P08754 354 aa17.21■□□□□ 0.35
CD9-208ENST00000538834 KLRK1P26718 216 aa17.21■□□□□ 0.35
CD9-208ENST00000538834 EPS15P42566 896 aa17.21■□□□□ 0.35
CD9-208ENST00000538834 DOK7Q18PE1 504 aa17.21■□□□□ 0.35
CD9-208ENST00000538834 FRAT1Q92837 279 aaPredicted RBP17.21■□□□□ 0.35
CD9-208ENST00000538834 ECM29Q5VYK3 1845 aa17.2■□□□□ 0.34
CD9-208ENST00000538834 SNAP23O00161 211 aa17.2■□□□□ 0.34
CD9-208ENST00000538834 TAF5LO75529 589 aa17.2■□□□□ 0.34
CD9-208ENST00000538834 RAD17O75943 681 aa17.2■□□□□ 0.34
CD9-208ENST00000538834 EPHX2P34913 555 aa17.2■□□□□ 0.34
CD9-208ENST00000538834 LRRC24Q50LG9 513 aa17.2■□□□□ 0.34
CD9-208ENST00000538834 ATG9AQ7Z3C6 839 aa17.2■□□□□ 0.34
CD9-208ENST00000538834 CLUAP1Q96AJ1 413 aa17.2■□□□□ 0.34
CD9-208ENST00000538834 COA1Q9GZY4 146 aa17.2■□□□□ 0.34
CD9-208ENST00000538834 PGAP2Q9UHJ9 254 aa17.2■□□□□ 0.34
CD9-208ENST00000538834 FBXO3Q9UK99 471 aa17.2■□□□□ 0.34
CD9-208ENST00000538834 HDAC5Q9UQL6 1122 aa17.2■□□□□ 0.34
CD9-208ENST00000538834 CHMP3Q9Y3E7 222 aa17.2■□□□□ 0.34
CD9-208ENST00000538834 LRRFIP2Q9Y608 721 aaKnown RBP17.2■□□□□ 0.34
CD9-208ENST00000538834 ZBTB7BO15156 539 aaPredicted RBP17.19■□□□□ 0.34
CD9-208ENST00000538834 HSPA6P17066 643 aa17.19■□□□□ 0.34
CD9-208ENST00000538834 GMPSP49915 693 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms