RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 EYA2O00167 538 aa21.33■■□□□ 1.01
CLN6-202ENST00000538696 DALRD3Q5D0E6 543 aaKnown RBP21.33■■□□□ 1.01
CLN6-202ENST00000538696 TMC4Q7Z404 712 aa21.33■■□□□ 1.01
CLN6-202ENST00000538696 FER1L6Q2WGJ9 1857 aa21.33■■□□□ 1.01
CLN6-202ENST00000538696 DUOX1Q9NRD9 1551 aa21.33■■□□□ 1
CLN6-202ENST00000538696 SNED1Q8TER0 1413 aa21.33■■□□□ 1
CLN6-202ENST00000538696 CIAO1O76071 339 aa21.32■■□□□ 1
CLN6-202ENST00000538696 OLFM4Q6UX06 510 aa21.32■■□□□ 1
CLN6-202ENST00000538696 LDHAL6AQ6ZMR3 332 aa21.32■■□□□ 1
CLN6-202ENST00000538696 ATG9AQ7Z3C6 839 aa21.32■■□□□ 1
CLN6-202ENST00000538696 C7orf43Q8WVR3 580 aa21.32■■□□□ 1
CLN6-202ENST00000538696 CNNM1Q9NRU3 951 aa21.32■■□□□ 1
CLN6-202ENST00000538696 NOP58Q9Y2X3 529 aaKnown RBP21.32■■□□□ 1
CLN6-202ENST00000538696 ATP6V0A2Q9Y487 856 aa21.32■■□□□ 1
CLN6-202ENST00000538696 SURF6O75683 361 aaKnown RBP21.31■■□□□ 1
CLN6-202ENST00000538696 ZNF219Q9P2Y4 722 aaPredicted RBP21.31■■□□□ 1
CLN6-202ENST00000538696 FBXO3Q9UK99 471 aa21.31■■□□□ 1
CLN6-202ENST00000538696 EXOC6BQ9Y2D4 811 aa21.31■■□□□ 1
CLN6-202ENST00000538696 RIPOR2Q9Y4F9 1068 aa21.31■■□□□ 1
CLN6-202ENST00000538696 RGS3P49796 1198 aa21.3■■□□□ 1
CLN6-202ENST00000538696 SP8Q8IXZ3 490 aa21.3■■□□□ 1
CLN6-202ENST00000538696 MINPP1Q9UNW1 487 aa21.3■■□□□ 1
CLN6-202ENST00000538696 BCS1LQ9Y276 419 aa21.3■■□□□ 1
CLN6-202ENST00000538696 ARAP2Q8WZ64 1704 aa21.3■■□□□ 1
CLN6-202ENST00000538696 C21orf2O43822 256 aa21.29■■□□□ 1
CLN6-202ENST00000538696 CHRNDQ07001 517 aa21.29■■□□□ 1
CLN6-202ENST00000538696 GCC1Q96CN9 775 aa21.29■■□□□ 1
CLN6-202ENST00000538696 IL15P40933 162 aaPredicted RBP21.29■■□□□ 1
CLN6-202ENST00000538696 G3BP1Q13283 466 aaKnown RBP eCLIP21.29■■□□□ 1
CLN6-202ENST00000538696 DCTPP1Q9H773 170 aa21.29■■□□□ 1
CLN6-202ENST00000538696 MROH5Q6ZUA9 1318 aa21.28■■□□□ 1
CLN6-202ENST00000538696 GPSM2P81274 684 aa21.28■■□□□ 1
CLN6-202ENST00000538696 VGLL2Q8N8G2 317 aa21.28■■□□□ 1
CLN6-202ENST00000538696 SASH1O94885 1247 aa21.27■□□□□ 0.99
CLN6-202ENST00000538696 NUCB1Q02818 461 aa21.27■□□□□ 0.99
CLN6-202ENST00000538696 OS9Q13438 667 aaPredicted RBP21.27■□□□□ 0.99
CLN6-202ENST00000538696 CCDC93Q567U6 631 aa21.27■□□□□ 0.99
CLN6-202ENST00000538696 METTL24Q5JXM2 366 aa21.27■□□□□ 0.99
CLN6-202ENST00000538696 HELBQ8NG08 1087 aaPredicted RBP21.27■□□□□ 0.99
CLN6-202ENST00000538696 HSP90AB4PQ58FF6 505 aa21.26■□□□□ 0.99
CLN6-202ENST00000538696 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.26■□□□□ 0.99
CLN6-202ENST00000538696 XDHP47989 1333 aa21.25■□□□□ 0.99
CLN6-202ENST00000538696 TAF5LO75529 589 aa21.25■□□□□ 0.99
CLN6-202ENST00000538696 YBX3P16989 372 aaKnown RBP eCLIP21.25■□□□□ 0.991e-7■■□□□ 13.8
CLN6-202ENST00000538696 PDE4AP27815 886 aa21.25■□□□□ 0.99
CLN6-202ENST00000538696 TFCP2Q12800 502 aa21.25■□□□□ 0.99
CLN6-202ENST00000538696 CC2D2BQ6DHV5 1058 aa21.25■□□□□ 0.99
CLN6-202ENST00000538696 ANKRD2Q9GZV1 360 aa21.25■□□□□ 0.99
CLN6-202ENST00000538696 PODXL2Q9NZ53 605 aa21.25■□□□□ 0.99
CLN6-202ENST00000538696 CCDC88AQ3V6T2 1871 aa21.25■□□□□ 0.99
CLN6-202ENST00000538696 ZNF609O15014 1411 aa21.24■□□□□ 0.99
CLN6-202ENST00000538696 APBB1O00213 710 aa21.24■□□□□ 0.99
CLN6-202ENST00000538696 SOGA3Q5TF21 947 aa21.24■□□□□ 0.99
CLN6-202ENST00000538696 ERC1Q8IUD2 1116 aa21.24■□□□□ 0.99
CLN6-202ENST00000538696 TMX4Q9H1E5 349 aaPredicted RBP21.24■□□□□ 0.99
CLN6-202ENST00000538696 TSHZ2Q9NRE2 1034 aa21.24■□□□□ 0.99
CLN6-202ENST00000538696 NSFL1CQ9UNZ2 370 aaKnown RBP21.24■□□□□ 0.99
CLN6-202ENST00000538696 RAB11FIP3O75154 756 aa21.23■□□□□ 0.99
CLN6-202ENST00000538696 PDE8BO95263 885 aa21.23■□□□□ 0.99
CLN6-202ENST00000538696 ANKRD45Q5TZF3 282 aa21.23■□□□□ 0.99
CLN6-202ENST00000538696 CHD1LQ86WJ1 897 aa21.23■□□□□ 0.99
CLN6-202ENST00000538696 MPNDQ8N594 471 aa21.23■□□□□ 0.99
CLN6-202ENST00000538696 RHPN1Q8TCX5 695 aa21.23■□□□□ 0.99
CLN6-202ENST00000538696 LNPKQ9C0E8 428 aa21.23■□□□□ 0.99
CLN6-202ENST00000538696 ANKIB1Q9P2G1 1089 aa21.23■□□□□ 0.99
CLN6-202ENST00000538696 CEP126Q9P2H0 1117 aa21.23■□□□□ 0.99
CLN6-202ENST00000538696 SBF1O95248 1867 aa21.22■□□□□ 0.99
CLN6-202ENST00000538696 WTIPA6NIX2 430 aaPredicted RBP21.22■□□□□ 0.99
CLN6-202ENST00000538696 DPP8Q6V1X1 898 aaPredicted RBP21.22■□□□□ 0.99
CLN6-202ENST00000538696 KIF1BPQ96EK5 621 aa21.22■□□□□ 0.99
CLN6-202ENST00000538696 SNAP23O00161 211 aa21.21■□□□□ 0.99
CLN6-202ENST00000538696 UFL1O94874 794 aa21.21■□□□□ 0.99
CLN6-202ENST00000538696 ATP2B4P23634 1241 aa21.21■□□□□ 0.99
CLN6-202ENST00000538696 RTKN2Q8IZC4 609 aa21.21■□□□□ 0.99
CLN6-202ENST00000538696 TBC1D16Q8TBP0 767 aa21.21■□□□□ 0.99
CLN6-202ENST00000538696 POLLQ9UGP5 575 aa21.21■□□□□ 0.99
CLN6-202ENST00000538696 GGA1Q9UJY5 639 aa21.21■□□□□ 0.99
CLN6-202ENST00000538696 SRCAPQ6ZRS2 3230 aa21.21■□□□□ 0.99
CLN6-202ENST00000538696 NFKBIEO00221 500 aa21.2■□□□□ 0.98
CLN6-202ENST00000538696 FGFR2P21802 821 aa21.2■□□□□ 0.98
CLN6-202ENST00000538696 PUM3Q15397 648 aaKnown RBP21.2■□□□□ 0.98
CLN6-202ENST00000538696 GRIPAP1Q4V328 841 aa21.2■□□□□ 0.98
CLN6-202ENST00000538696 GPR101Q96P66 508 aaPredicted RBP21.2■□□□□ 0.98
CLN6-202ENST00000538696 RTFDC1Q9BY42 306 aaPredicted RBP21.2■□□□□ 0.98
CLN6-202ENST00000538696 IL1RAPL2Q9NP60 686 aa21.2■□□□□ 0.98
CLN6-202ENST00000538696 LEMD3Q9Y2U8 911 aa21.2■□□□□ 0.98
CLN6-202ENST00000538696 DICER1Q9UPY3 1922 aaKnown RBP21.2■□□□□ 0.98
CLN6-202ENST00000538696 ZNF804BA4D1E1 1349 aa21.2■□□□□ 0.98
CLN6-202ENST00000538696 SMARCA5O60264 1052 aaPredicted RBP21.19■□□□□ 0.98
CLN6-202ENST00000538696 FKBP4Q02790 459 aaKnown RBP eCLIP21.19■□□□□ 0.98
CLN6-202ENST00000538696 ATP2B3Q16720 1220 aa21.19■□□□□ 0.98
CLN6-202ENST00000538696 PSMD1Q99460 953 aa21.19■□□□□ 0.98
CLN6-202ENST00000538696 LRRCC1Q9C099 1032 aa21.19■□□□□ 0.98
CLN6-202ENST00000538696 IRS2Q9Y4H2 1338 aa21.19■□□□□ 0.98
CLN6-202ENST00000538696 KLRK1P26718 216 aa21.18■□□□□ 0.98
CLN6-202ENST00000538696 KCNJ4P48050 445 aa21.18■□□□□ 0.98
CLN6-202ENST00000538696 RASSF7Q02833 373 aa21.18■□□□□ 0.98
CLN6-202ENST00000538696 UBE4AQ14139 1066 aa21.18■□□□□ 0.98
CLN6-202ENST00000538696 GPR162Q16538 588 aa21.18■□□□□ 0.98
CLN6-202ENST00000538696 TNNI3KQ59H18 835 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms