RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 HSP90B1P14625 803 aaKnown RBP16.43■□□□□ 0.22
CHFR-216ENST00000538235 IFIT5Q13325 482 aaKnown RBP16.43■□□□□ 0.22
CHFR-216ENST00000538235 MTX1Q13505 466 aa16.43■□□□□ 0.22
CHFR-216ENST00000538235 PDE3AQ14432 1141 aa16.43■□□□□ 0.22
CHFR-216ENST00000538235 HELBQ8NG08 1087 aaPredicted RBP16.43■□□□□ 0.22
CHFR-216ENST00000538235 CDC5LQ99459 802 aaKnown RBP16.43■□□□□ 0.22
CHFR-216ENST00000538235 PSMD1Q99460 953 aa16.43■□□□□ 0.22
CHFR-216ENST00000538235 BSDC1Q9NW68 430 aaPredicted RBP16.43■□□□□ 0.22
CHFR-216ENST00000538235 RNF181Q9P0P0 153 aa16.43■□□□□ 0.22
CHFR-216ENST00000538235 GNAI3P08754 354 aa16.42■□□□□ 0.22
CHFR-216ENST00000538235 ATG9AQ7Z3C6 839 aa16.42■□□□□ 0.22
CHFR-216ENST00000538235 TBC1D16Q8TBP0 767 aa16.42■□□□□ 0.22
CHFR-216ENST00000538235 ZBTB40Q9NUA8 1239 aa16.42■□□□□ 0.22
CHFR-216ENST00000538235 ZNF541Q9H0D2 1346 aa16.42■□□□□ 0.22
CHFR-216ENST00000538235 TAF5LO75529 589 aa16.41■□□□□ 0.22
CHFR-216ENST00000538235 LMNB1P20700 586 aa16.41■□□□□ 0.22
CHFR-216ENST00000538235 CHRNDQ07001 517 aa16.41■□□□□ 0.22
CHFR-216ENST00000538235 AOC3Q16853 763 aa16.41■□□□□ 0.22
CHFR-216ENST00000538235 TXNRD3Q86VQ6 643 aa16.41■□□□□ 0.22
CHFR-216ENST00000538235 SIRT2Q8IXJ6 389 aa16.41■□□□□ 0.22
CHFR-216ENST00000538235 MPNDQ8N594 471 aa16.41■□□□□ 0.22
CHFR-216ENST00000538235 VGLL2Q8N8G2 317 aa16.41■□□□□ 0.22
CHFR-216ENST00000538235 CRBNQ96SW2 442 aa16.41■□□□□ 0.22
CHFR-216ENST00000538235 PODXL2Q9NZ53 605 aa16.41■□□□□ 0.22
CHFR-216ENST00000538235 RIPOR2Q9Y4F9 1068 aa16.41■□□□□ 0.22
CHFR-216ENST00000538235 WDR90Q96KV7 1748 aa16.41■□□□□ 0.22
CHFR-216ENST00000538235 ADAMTSL1Q8N6G6 1762 aa16.41■□□□□ 0.22
CHFR-216ENST00000538235 GNAI2P04899 355 aa16.4■□□□□ 0.22
CHFR-216ENST00000538235 IARSP41252 1262 aaKnown RBP16.4■□□□□ 0.22
CHFR-216ENST00000538235 CCDC57Q2TAC2 916 aa16.4■□□□□ 0.22
CHFR-216ENST00000538235 SOGA3Q5TF21 947 aa16.4■□□□□ 0.22
CHFR-216ENST00000538235 CC2D2BQ6DHV5 1058 aa16.4■□□□□ 0.22
CHFR-216ENST00000538235 CEP85Q6P2H3 762 aa16.4■□□□□ 0.22
CHFR-216ENST00000538235 DPP8Q6V1X1 898 aaPredicted RBP16.4■□□□□ 0.22
CHFR-216ENST00000538235 TMC4Q7Z404 712 aa16.4■□□□□ 0.22
CHFR-216ENST00000538235 RTKN2Q8IZC4 609 aa16.4■□□□□ 0.22
CHFR-216ENST00000538235 NSFL1CQ9UNZ2 370 aaKnown RBP16.4■□□□□ 0.22
CHFR-216ENST00000538235 SUPT16HQ9Y5B9 1047 aaKnown RBP16.4■□□□□ 0.22
CHFR-216ENST00000538235 YDJCA8MPS7 323 aa16.39■□□□□ 0.21
CHFR-216ENST00000538235 IGHMBP2P38935 993 aaKnown RBP16.39■□□□□ 0.21
CHFR-216ENST00000538235 POLA2Q14181 598 aa16.39■□□□□ 0.21
CHFR-216ENST00000538235 XDHP47989 1333 aa16.39■□□□□ 0.21
CHFR-216ENST00000538235 SRGAP3O43295 1099 aa16.38■□□□□ 0.21
CHFR-216ENST00000538235 UFL1O94874 794 aa16.38■□□□□ 0.21
CHFR-216ENST00000538235 SIL1Q9H173 461 aa16.38■□□□□ 0.21
CHFR-216ENST00000538235 DDX19BQ9UMR2 479 aa16.38■□□□□ 0.21
CHFR-216ENST00000538235 KIAA2012Q0VF49 1180 aa16.37■□□□□ 0.21
CHFR-216ENST00000538235 LDHAL6AQ6ZMR3 332 aa16.37■□□□□ 0.21
CHFR-216ENST00000538235 SSH3Q8TE77 659 aa16.37■□□□□ 0.21
CHFR-216ENST00000538235 COPRSQ9NQ92 184 aa16.37■□□□□ 0.21
CHFR-216ENST00000538235 KCNQ5Q9NR82 932 aa16.37■□□□□ 0.21
CHFR-216ENST00000538235 MYO5AQ9Y4I1 1855 aaKnown RBP16.36■□□□□ 0.21
CHFR-216ENST00000538235 DCAF8L1A6NGE4 600 aa16.36■□□□□ 0.21
CHFR-216ENST00000538235 EYA2O00167 538 aa16.36■□□□□ 0.21
CHFR-216ENST00000538235 RIMBP2O15034 1052 aa16.36■□□□□ 0.21
CHFR-216ENST00000538235 PPIP5K2O43314 1243 aa16.36■□□□□ 0.21
CHFR-216ENST00000538235 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
CHFR-216ENST00000538235 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.36■□□□□ 0.21
CHFR-216ENST00000538235 MPHOSPH8Q99549 860 aa16.36■□□□□ 0.21
CHFR-216ENST00000538235 MED23Q9ULK4 1368 aa16.36■□□□□ 0.21
CHFR-216ENST00000538235 COL1A1P02452 1464 aaPredicted RBP16.35■□□□□ 0.21
CHFR-216ENST00000538235 YY1P25490 414 aa16.35■□□□□ 0.21
CHFR-216ENST00000538235 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
CHFR-216ENST00000538235 TAF7LQ5H9L4 462 aa16.35■□□□□ 0.21
CHFR-216ENST00000538235 DBNDD1Q9H9R9 158 aa16.35■□□□□ 0.21
CHFR-216ENST00000538235 CNNM1Q9NRU3 951 aa16.35■□□□□ 0.21
CHFR-216ENST00000538235 ANKIB1Q9P2G1 1089 aa16.35■□□□□ 0.21
CHFR-216ENST00000538235 GGA1Q9UJY5 639 aa16.35■□□□□ 0.21
CHFR-216ENST00000538235 ZNF609O15014 1411 aa16.35■□□□□ 0.21
CHFR-216ENST00000538235 AKAP11Q9UKA4 1901 aa16.35■□□□□ 0.21
CHFR-216ENST00000538235 SCN4AP35499 1836 aa16.34■□□□□ 0.21
CHFR-216ENST00000538235 C6orf229H3BNL8 230 aa16.34■□□□□ 0.21
CHFR-216ENST00000538235 FZD9O00144 591 aa16.34■□□□□ 0.21
CHFR-216ENST00000538235 MS4A1P11836 297 aa16.34■□□□□ 0.21
CHFR-216ENST00000538235 DOK7Q18PE1 504 aa16.34■□□□□ 0.21
CHFR-216ENST00000538235 LARGE2Q8N3Y3 721 aa16.34■□□□□ 0.21
CHFR-216ENST00000538235 PCDHB15Q9Y5E8 787 aa16.34■□□□□ 0.21
CHFR-216ENST00000538235 ZNF804BA4D1E1 1349 aa16.34■□□□□ 0.21
CHFR-216ENST00000538235 SASH1O94885 1247 aa16.33■□□□□ 0.2
CHFR-216ENST00000538235 FGFR2P21802 821 aa16.33■□□□□ 0.2
CHFR-216ENST00000538235 EXOC6Q8TAG9 804 aa16.33■□□□□ 0.2
CHFR-216ENST00000538235 POTECB2RU33 542 aa16.32■□□□□ 0.2
CHFR-216ENST00000538235 CIAO1O76071 339 aa16.32■□□□□ 0.2
CHFR-216ENST00000538235 ATP2B4P23634 1241 aa16.32■□□□□ 0.2
CHFR-216ENST00000538235 WASHC4Q2M389 1173 aa16.32■□□□□ 0.2
CHFR-216ENST00000538235 GRIPAP1Q4V328 841 aa16.32■□□□□ 0.2
CHFR-216ENST00000538235 ZNF784Q8NCA9 323 aaPredicted RBP16.32■□□□□ 0.2
CHFR-216ENST00000538235 ZNF526Q8TF50 670 aaPredicted RBP16.32■□□□□ 0.2
CHFR-216ENST00000538235 SHTN1A0MZ66 631 aa16.31■□□□□ 0.2
CHFR-216ENST00000538235 ECE2O60344 883 aa16.31■□□□□ 0.2
CHFR-216ENST00000538235 DDNO94850 711 aaPredicted RBP16.31■□□□□ 0.2
CHFR-216ENST00000538235 METTL24Q5JXM2 366 aa16.31■□□□□ 0.2
CHFR-216ENST00000538235 SUPT20HQ8NEM7 779 aa16.31■□□□□ 0.2
CHFR-216ENST00000538235 ANKRD2Q9GZV1 360 aa16.31■□□□□ 0.2
CHFR-216ENST00000538235 NMRK2Q9NPI5 230 aa16.31■□□□□ 0.2
CHFR-216ENST00000538235 LEMD3Q9Y2U8 911 aa16.31■□□□□ 0.2
CHFR-216ENST00000538235 MROH5Q6ZUA9 1318 aa16.3■□□□□ 0.2
CHFR-216ENST00000538235 ZC3H4Q9UPT8 1303 aaKnown RBP16.3■□□□□ 0.2
CHFR-216ENST00000538235 PDE8BO95263 885 aa16.3■□□□□ 0.2
CHFR-216ENST00000538235 ADORA1P30542 326 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms