RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 IRS2Q9Y4H2 1338 aa10.66□□□□□ -0.7
SPARC-208ENST00000538026 ZNF646O15015 1829 aaPredicted RBP10.66□□□□□ -0.7
SPARC-208ENST00000538026 SHTN1A0MZ66 631 aa10.66□□□□□ -0.7
SPARC-208ENST00000538026 RIMBP2O15034 1052 aa10.66□□□□□ -0.7
SPARC-208ENST00000538026 HSP90B1P14625 803 aaKnown RBP10.66□□□□□ -0.7
SPARC-208ENST00000538026 KLRK1P26718 216 aa10.66□□□□□ -0.7
SPARC-208ENST00000538026 DOK7Q18PE1 504 aa10.66□□□□□ -0.7
SPARC-208ENST00000538026 TXNRD3Q86VQ6 643 aa10.66□□□□□ -0.7
SPARC-208ENST00000538026 ANKRD18AQ8IVF6 992 aa10.66□□□□□ -0.7
SPARC-208ENST00000538026 GPC2Q8N158 579 aa10.66□□□□□ -0.7
SPARC-208ENST00000538026 ZNF594Q96JF6 807 aaPredicted RBP10.66□□□□□ -0.7
SPARC-208ENST00000538026 TAF1DQ9H5J8 278 aaPredicted RBP10.66□□□□□ -0.7
SPARC-208ENST00000538026 ZNRF3Q9ULT6 936 aa10.66□□□□□ -0.7
SPARC-208ENST00000538026 ADAMTSL1Q8N6G6 1762 aa10.66□□□□□ -0.7
SPARC-208ENST00000538026 ZBED9Q6R2W3 1325 aa10.65□□□□□ -0.7
SPARC-208ENST00000538026 POLR2AP24928 1970 aaKnown RBP10.65□□□□□ -0.7
SPARC-208ENST00000538026 C6orf229H3BNL8 230 aa10.65□□□□□ -0.7
SPARC-208ENST00000538026 RAD17O75943 681 aa10.65□□□□□ -0.7
SPARC-208ENST00000538026 EPS15P42566 896 aa10.65□□□□□ -0.7
SPARC-208ENST00000538026 RABL6Q3YEC7 729 aaPredicted RBP10.65□□□□□ -0.7
SPARC-208ENST00000538026 NIM1KQ8IY84 436 aa10.65□□□□□ -0.7
SPARC-208ENST00000538026 SUPT20HQ8NEM7 779 aa10.65□□□□□ -0.7
SPARC-208ENST00000538026 JDP2Q8WYK2 163 aa10.65□□□□□ -0.7
SPARC-208ENST00000538026 BICC1Q9H694 974 aaKnown RBP10.65□□□□□ -0.7
SPARC-208ENST00000538026 DBNDD1Q9H9R9 158 aa10.65□□□□□ -0.7
SPARC-208ENST00000538026 GJA3Q9Y6H8 435 aa10.65□□□□□ -0.7
SPARC-208ENST00000538026 PSME4Q14997 1843 aa10.64□□□□□ -0.71
SPARC-208ENST00000538026 UFL1O94874 794 aa10.64□□□□□ -0.71
SPARC-208ENST00000538026 HTRA3P83110 453 aa10.64□□□□□ -0.71
SPARC-208ENST00000538026 WASHC4Q2M389 1173 aa10.64□□□□□ -0.71
SPARC-208ENST00000538026 CDC5LQ99459 802 aaKnown RBP10.64□□□□□ -0.71
SPARC-208ENST00000538026 PUS3Q9BZE2 481 aaKnown RBP10.64□□□□□ -0.71
SPARC-208ENST00000538026 C9orf78Q9NZ63 289 aaPredicted RBP10.64□□□□□ -0.71
SPARC-208ENST00000538026 XDHP47989 1333 aa10.63□□□□□ -0.71
SPARC-208ENST00000538026 TRIM27P14373 513 aa10.63□□□□□ -0.71
SPARC-208ENST00000538026 HSPA6P17066 643 aa10.63□□□□□ -0.71
SPARC-208ENST00000538026 GMPSP49915 693 aaPredicted RBP10.63□□□□□ -0.71
SPARC-208ENST00000538026 EIF6P56537 245 aaKnown RBP10.63□□□□□ -0.71
SPARC-208ENST00000538026 HELBQ8NG08 1087 aaPredicted RBP10.63□□□□□ -0.71
SPARC-208ENST00000538026 TMX4Q9H1E5 349 aaPredicted RBP10.63□□□□□ -0.71
SPARC-208ENST00000538026 ANKIB1Q9P2G1 1089 aa10.63□□□□□ -0.71
SPARC-208ENST00000538026 GGA1Q9UJY5 639 aa10.63□□□□□ -0.71
SPARC-208ENST00000538026 ZBTB12Q9Y330 459 aaPredicted RBP10.63□□□□□ -0.71
SPARC-208ENST00000538026 ANKRD18BA2A2Z9 1011 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 PSMD14O00487 310 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 ECE2O60344 883 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 TAF5LO75529 589 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 ITGBL1O95965 494 aaPredicted RBP10.62□□□□□ -0.71
SPARC-208ENST00000538026 EGFRP00533 1210 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 ATP2B4P23634 1241 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 EPHX2P34913 555 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 RFX5P48382 616 aaPredicted RBP10.62□□□□□ -0.71
SPARC-208ENST00000538026 CCT4P50991 539 aaKnown RBP10.62□□□□□ -0.71
SPARC-208ENST00000538026 HIRAP54198 1017 aaPredicted RBP10.62□□□□□ -0.71
SPARC-208ENST00000538026 CHRNDQ07001 517 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 FSTL1Q12841 308 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 IFIT5Q13325 482 aaKnown RBP10.62□□□□□ -0.71
SPARC-208ENST00000538026 INTS3Q68E01 1043 aaKnown RBP10.62□□□□□ -0.71
SPARC-208ENST00000538026 CIAPIN1Q6FI81 312 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 DNAJC5GQ8N7S2 189 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 KLHDC4Q8TBB5 520 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 ARHGAP45Q92619 1136 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 GPRC5DQ9NZD1 345 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 HACL1Q9UJ83 578 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 RIPOR2Q9Y4F9 1068 aa10.62□□□□□ -0.71
SPARC-208ENST00000538026 VIL1P09327 827 aaKnown RBP10.61□□□□□ -0.71
SPARC-208ENST00000538026 IGHMBP2P38935 993 aaKnown RBP10.61□□□□□ -0.71
SPARC-208ENST00000538026 GMLQ99445 158 aa10.61□□□□□ -0.71
SPARC-208ENST00000538026 MEIS3Q99687 375 aa10.61□□□□□ -0.71
SPARC-208ENST00000538026 ZC3H12CQ9C0D7 883 aaKnown RBP10.61□□□□□ -0.71
SPARC-208ENST00000538026 IQCA1LA6NCM1 817 aa10.6□□□□□ -0.71
SPARC-208ENST00000538026 RLBP1P12271 317 aa10.6□□□□□ -0.71
SPARC-208ENST00000538026 FMR1Q06787 632 aaKnown RBP eCLIP10.6□□□□□ -0.71
SPARC-208ENST00000538026 LRRC24Q50LG9 513 aa10.6□□□□□ -0.71
SPARC-208ENST00000538026 CHADLQ6NUI6 762 aa10.6□□□□□ -0.71
SPARC-208ENST00000538026 C16orf71Q8IYS4 520 aaPredicted RBP10.6□□□□□ -0.71
SPARC-208ENST00000538026 SMC1BQ8NDV3 1235 aa10.6□□□□□ -0.71
SPARC-208ENST00000538026 TRPM4Q8TD43 1214 aa10.6□□□□□ -0.71
SPARC-208ENST00000538026 EYA3Q99504 573 aa10.6□□□□□ -0.71
SPARC-208ENST00000538026 MPHOSPH8Q99549 860 aa10.6□□□□□ -0.71
SPARC-208ENST00000538026 MXD3Q9BW11 206 aa10.6□□□□□ -0.71
SPARC-208ENST00000538026 API5Q9BZZ5 524 aaKnown RBP10.6□□□□□ -0.71
SPARC-208ENST00000538026 LEMD3Q9Y2U8 911 aa10.6□□□□□ -0.71
SPARC-208ENST00000538026 CHMP3Q9Y3E7 222 aa10.6□□□□□ -0.71
SPARC-208ENST00000538026 MED23Q9ULK4 1368 aa10.6□□□□□ -0.71
SPARC-208ENST00000538026 ZNF804BA4D1E1 1349 aa10.59□□□□□ -0.71
SPARC-208ENST00000538026 CCDC57Q2TAC2 916 aa10.59□□□□□ -0.71
SPARC-208ENST00000538026 EAPPQ56P03 285 aaPredicted RBP10.59□□□□□ -0.71
SPARC-208ENST00000538026 MAP1SQ66K74 1059 aaPredicted RBP10.59□□□□□ -0.71
SPARC-208ENST00000538026 ATF7IPQ6VMQ6 1270 aa10.59□□□□□ -0.71
SPARC-208ENST00000538026 LDHAL6AQ6ZMR3 332 aa10.59□□□□□ -0.71
SPARC-208ENST00000538026 LDHDQ86WU2 507 aa10.59□□□□□ -0.71
SPARC-208ENST00000538026 VGLL2Q8N8G2 317 aa10.59□□□□□ -0.71
SPARC-208ENST00000538026 CNOT7Q9UIV1 285 aaKnown RBP10.59□□□□□ -0.71
SPARC-208ENST00000538026 PASKQ96RG2 1323 aa10.58□□□□□ -0.71
SPARC-208ENST00000538026 PTPN12Q05209 780 aaKnown RBP10.58□□□□□ -0.72
SPARC-208ENST00000538026 TNIP1Q15025 636 aa10.58□□□□□ -0.72
SPARC-208ENST00000538026 DACT2Q5SW24 774 aa10.58□□□□□ -0.72
SPARC-208ENST00000538026 DLK2Q6UY11 383 aa10.58□□□□□ -0.72
SPARC-208ENST00000538026 C15orf52Q6ZUT6 534 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms