RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 MRFAP1Q9Y605 127 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 DISP1Q96F81 1524 aa9.83□□□□□ -0.84
SRGAP1-202ENST00000537556 SHTN1A0MZ66 631 aa9.83□□□□□ -0.84
SRGAP1-202ENST00000537556 ANKRD18BA2A2Z9 1011 aa9.83□□□□□ -0.84
SRGAP1-202ENST00000537556 FCHSD1Q86WN1 690 aa9.83□□□□□ -0.84
SRGAP1-202ENST00000537556 AMOTL1Q8IY63 956 aa9.83□□□□□ -0.84
SRGAP1-202ENST00000537556 JPH4Q96JJ6 628 aa9.83□□□□□ -0.84
SRGAP1-202ENST00000537556 THUMPD2Q9BTF0 503 aaKnown RBP9.83□□□□□ -0.84
SRGAP1-202ENST00000537556 ANO10Q9NW15 660 aa9.83□□□□□ -0.84
SRGAP1-202ENST00000537556 N4BP1O75113 896 aaKnown RBP9.83□□□□□ -0.84
SRGAP1-202ENST00000537556 MYBL2P10244 700 aa9.83□□□□□ -0.84
SRGAP1-202ENST00000537556 WLSQ5T9L3 541 aa9.83□□□□□ -0.84
SRGAP1-202ENST00000537556 BAG1Q99933 345 aaPredicted RBP9.83□□□□□ -0.84
SRGAP1-202ENST00000537556 RAB21Q9UL25 225 aa9.83□□□□□ -0.84
SRGAP1-202ENST00000537556 CAPN7Q9Y6W3 813 aa9.83□□□□□ -0.84
SRGAP1-202ENST00000537556 SOS1Q07889 1333 aaPredicted RBP9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 RPGRIP1LQ68CZ1 1315 aa9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 CEP152O94986 1710 aa9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 CAND2O75155 1236 aa9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 PDCD2Q16342 344 aaPredicted RBP9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 KIAA1328Q86T90 577 aa9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 MRPL50Q8N5N7 158 aaKnown RBP9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 TTC21AQ8NDW8 1320 aa9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 ATXN2Q99700 1313 aaKnown RBP9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 RTN2O75298 545 aa9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 PDCP20941 246 aa9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 GCKP35557 465 aa9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 CCT5P48643 541 aa9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 CLNS1AP54105 237 aaKnown RBP9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 ARMCX5Q6P1M9 558 aa9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 SPATS2Q86XZ4 545 aaKnown RBP9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 CEP57L1Q8IYX8 460 aa9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 ZSCAN31Q96LW9 406 aaPredicted RBP9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 TMX4Q9H1E5 349 aaPredicted RBP9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 GPATCH8Q9UKJ3 1502 aaKnown RBP9.82□□□□□ -0.84
SRGAP1-202ENST00000537556 PHACTR2O75167 634 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 NR1I2O75469 434 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 KIAA0754O94854 1291 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 HSPA4P34932 840 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 CCNHP51946 323 aaPredicted RBP9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 PDE1AP54750 535 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 CASP8Q14790 479 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 TMC6Q7Z403 805 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 PLA2R1Q13018 1463 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 PES1O00541 588 aaKnown RBP9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 SKIDA1Q1XH10 827 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 SMARCC1Q92922 1105 aaPredicted RBP9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 SH2B1Q9NRF2 756 aaPredicted RBP9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 TRAPPC8Q9Y2L5 1435 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 FSBPO95073 299 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 SNUPNO95149 360 aaKnown RBP9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 EZRP15311 586 aaKnown RBP9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 AK2P54819 239 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 CHMP4BP1P59074 171 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 C11orf57Q6ZUT1 292 aaPredicted RBP9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 B4GALNT4Q76KP1 1039 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 STAG3Q9UJ98 1225 aa9.81□□□□□ -0.84
SRGAP1-202ENST00000537556 TTC37Q6PGP7 1564 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 FANCAO15360 1455 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 KINO60870 393 aaKnown RBP9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 RNF40O75150 1001 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 COQ9O75208 318 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 CHMLP26374 656 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 GNG11P61952 73 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 KLHL23Q8NBE8 558 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 KCNB2Q92953 911 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 TTC14Q96N46 770 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 VIPAS39Q9H9C1 493 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 CD248Q9HCU0 757 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 CARMIL2Q6F5E8 1435 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 SHOX2O60902 331 aaPredicted RBP9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 PRPHP41219 470 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 ARHGAP25P42331 645 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 CDR1P51861 262 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 LARP1BQ659C4 914 aaKnown RBP9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 SRGAP1Q7Z6B7 1085 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 CCDC50Q8IVM0 306 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 DHX40Q8IX18 779 aaKnown RBP9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 MSANTD4Q8NCY6 345 aa9.8□□□□□ -0.84
SRGAP1-202ENST00000537556 KIF13AQ9H1H9 1805 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 TROQ12816 1431 aaPredicted RBP9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 CD109Q6YHK3 1445 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 APBB1O00213 710 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 HMMRO75330 724 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 SLC8A3P57103 927 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 MTA1Q13330 715 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 KIF4BQ2VIQ3 1234 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 CEP85LQ5SZL2 805 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 ABCB6Q9NP58 842 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 MYO6Q9UM54 1294 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 RPS6KL1Q9Y6S9 549 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 NSD3Q9BZ95 1437 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 PECAM1P16284 738 aaPredicted RBP9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 RBM5P52756 815 aaKnown RBP eCLIP9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 TUBB2AQ13885 445 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 RUFY3Q7L099 469 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 LEO1Q8WVC0 666 aaPredicted RBP9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 CLIC6Q96NY7 704 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 PLEKHF1Q96S99 279 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 TUBB2BQ9BVA1 445 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms