RNA–Protein interactions for RNA: ENST00000536996.5

SPPL3-204, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-204ENST00000536996 PODXL2Q9NZ53 605 aa18.03■□□□□ 0.48
SPPL3-204ENST00000536996 ARAP2Q8WZ64 1704 aa18.03■□□□□ 0.48
SPPL3-204ENST00000536996 RFX5P48382 616 aaPredicted RBP18.02■□□□□ 0.48
SPPL3-204ENST00000536996 MINPP1Q9UNW1 487 aa18.02■□□□□ 0.48
SPPL3-204ENST00000536996 SUPT16HQ9Y5B9 1047 aaKnown RBP18.02■□□□□ 0.48
SPPL3-204ENST00000536996 XDHP47989 1333 aa18.01■□□□□ 0.47
SPPL3-204ENST00000536996 LMNB1P20700 586 aa18.01■□□□□ 0.47
SPPL3-204ENST00000536996 RASSF7Q02833 373 aa18.01■□□□□ 0.47
SPPL3-204ENST00000536996 DPP8Q6V1X1 898 aaPredicted RBP18.01■□□□□ 0.47
SPPL3-204ENST00000536996 LDHAL6AQ6ZMR3 332 aa18.01■□□□□ 0.47
SPPL3-204ENST00000536996 SLC51AQ86UW1 340 aa18.01■□□□□ 0.47
SPPL3-204ENST00000536996 SUPT20HQ8NEM7 779 aa18.01■□□□□ 0.47
SPPL3-204ENST00000536996 ZNF594Q96JF6 807 aaPredicted RBP18.01■□□□□ 0.47
SPPL3-204ENST00000536996 VPS33BQ9H267 617 aa18.01■□□□□ 0.47
SPPL3-204ENST00000536996 FBXO3Q9UK99 471 aa18.01■□□□□ 0.47
SPPL3-204ENST00000536996 SRGAP3O43295 1099 aa18■□□□□ 0.47
SPPL3-204ENST00000536996 GPSM2P81274 684 aa18■□□□□ 0.47
SPPL3-204ENST00000536996 PTPN12Q05209 780 aaKnown RBP18■□□□□ 0.47
SPPL3-204ENST00000536996 ANKRD2Q9GZV1 360 aa18■□□□□ 0.47
SPPL3-204ENST00000536996 NSFL1CQ9UNZ2 370 aaKnown RBP18■□□□□ 0.47
SPPL3-204ENST00000536996 ATP8B2P98198 1209 aa17.99■□□□□ 0.47
SPPL3-204ENST00000536996 C1orf115Q9H7X2 142 aa17.99■□□□□ 0.47
SPPL3-204ENST00000536996 COPRSQ9NQ92 184 aa17.99■□□□□ 0.47
SPPL3-204ENST00000536996 CNNM1Q9NRU3 951 aa17.99■□□□□ 0.47
SPPL3-204ENST00000536996 ZNF646O15015 1829 aaPredicted RBP17.99■□□□□ 0.47
SPPL3-204ENST00000536996 PNMA6EA0A0J9YXQ4 647 aa17.98■□□□□ 0.47
SPPL3-204ENST00000536996 PRELPP51888 382 aa17.98■□□□□ 0.47
SPPL3-204ENST00000536996 CHRNDQ07001 517 aa17.98■□□□□ 0.47
SPPL3-204ENST00000536996 SSH3Q8TE77 659 aa17.98■□□□□ 0.47
SPPL3-204ENST00000536996 ANKIB1Q9P2G1 1089 aa17.98■□□□□ 0.47
SPPL3-204ENST00000536996 RIPOR2Q9Y4F9 1068 aa17.98■□□□□ 0.47
SPPL3-204ENST00000536996 SCN9AQ15858 1988 aa17.98■□□□□ 0.47
SPPL3-204ENST00000536996 MROH5Q6ZUA9 1318 aa17.98■□□□□ 0.47
SPPL3-204ENST00000536996 ZC3H4Q9UPT8 1303 aaKnown RBP17.98■□□□□ 0.47
SPPL3-204ENST00000536996 COL4A5P29400 1685 aa17.97■□□□□ 0.47
SPPL3-204ENST00000536996 EYA2O00167 538 aa17.97■□□□□ 0.47
SPPL3-204ENST00000536996 CIAO1O76071 339 aa17.97■□□□□ 0.47
SPPL3-204ENST00000536996 ATP2B4P23634 1241 aa17.97■□□□□ 0.47
SPPL3-204ENST00000536996 IARSP41252 1262 aaKnown RBP17.97■□□□□ 0.47
SPPL3-204ENST00000536996 POLA2Q14181 598 aa17.97■□□□□ 0.47
SPPL3-204ENST00000536996 CEP85Q6P2H3 762 aa17.97■□□□□ 0.47
SPPL3-204ENST00000536996 RPAP2Q8IXW5 612 aaPredicted RBP17.97■□□□□ 0.47
SPPL3-204ENST00000536996 TBC1D16Q8TBP0 767 aa17.97■□□□□ 0.47
SPPL3-204ENST00000536996 GGA1Q9UJY5 639 aa17.97■□□□□ 0.47
SPPL3-204ENST00000536996 LEMD3Q9Y2U8 911 aa17.97■□□□□ 0.47
SPPL3-204ENST00000536996 AAMPQ13685 434 aa17.96■□□□□ 0.47
SPPL3-204ENST00000536996 C9orf131Q5VYM1 1079 aa17.96■□□□□ 0.47
SPPL3-204ENST00000536996 KLHDC4Q8TBB5 520 aa17.96■□□□□ 0.47
SPPL3-204ENST00000536996 EYA3Q99504 573 aa17.96■□□□□ 0.47
SPPL3-204ENST00000536996 PUS3Q9BZE2 481 aaKnown RBP17.96■□□□□ 0.47
SPPL3-204ENST00000536996 ZNF277Q9NRM2 450 aaPredicted RBP17.96■□□□□ 0.47
SPPL3-204ENST00000536996 RNF181Q9P0P0 153 aa17.96■□□□□ 0.47
SPPL3-204ENST00000536996 POLLQ9UGP5 575 aa17.96■□□□□ 0.47
SPPL3-204ENST00000536996 KIAA2012Q0VF49 1180 aa17.95■□□□□ 0.46
SPPL3-204ENST00000536996 LRRC24Q50LG9 513 aa17.95■□□□□ 0.46
SPPL3-204ENST00000536996 CRBNQ96SW2 442 aa17.95■□□□□ 0.46
SPPL3-204ENST00000536996 MED23Q9ULK4 1368 aa17.94■□□□□ 0.46
SPPL3-204ENST00000536996 SCN4AP35499 1836 aa17.94■□□□□ 0.46
SPPL3-204ENST00000536996 C6orf229H3BNL8 230 aa17.94■□□□□ 0.46
SPPL3-204ENST00000536996 UFL1O94874 794 aa17.94■□□□□ 0.46
SPPL3-204ENST00000536996 WASHC4Q2M389 1173 aa17.94■□□□□ 0.46
SPPL3-204ENST00000536996 ATG9AQ7Z3C6 839 aa17.94■□□□□ 0.46
SPPL3-204ENST00000536996 ZNF804BA4D1E1 1349 aa17.94■□□□□ 0.46
SPPL3-204ENST00000536996 PPIP5K2O43314 1243 aa17.93■□□□□ 0.46
SPPL3-204ENST00000536996 IL15P40933 162 aaPredicted RBP17.93■□□□□ 0.46
SPPL3-204ENST00000536996 AOC3Q16853 763 aa17.93■□□□□ 0.46
SPPL3-204ENST00000536996 LARGE2Q8N3Y3 721 aa17.93■□□□□ 0.46
SPPL3-204ENST00000536996 VGLL2Q8N8G2 317 aa17.93■□□□□ 0.46
SPPL3-204ENST00000536996 PA2G4Q9UQ80 394 aaKnown RBP17.93■□□□□ 0.46
SPPL3-204ENST00000536996 HMMRO75330 724 aa17.92■□□□□ 0.46
SPPL3-204ENST00000536996 PDE8BO95263 885 aa17.92■□□□□ 0.46
SPPL3-204ENST00000536996 CENPBP07199 599 aaPredicted RBP17.92■□□□□ 0.46
SPPL3-204ENST00000536996 METTL24Q5JXM2 366 aa17.92■□□□□ 0.46
SPPL3-204ENST00000536996 C15orf52Q6ZUT6 534 aaKnown RBP17.92■□□□□ 0.46
SPPL3-204ENST00000536996 HELBQ8NG08 1087 aaPredicted RBP17.92■□□□□ 0.46
SPPL3-204ENST00000536996 JDP2Q8WYK2 163 aa17.92■□□□□ 0.46
SPPL3-204ENST00000536996 ZC3H12CQ9C0D7 883 aaKnown RBP17.92■□□□□ 0.46
SPPL3-204ENST00000536996 SIL1Q9H173 461 aa17.92■□□□□ 0.46
SPPL3-204ENST00000536996 NOP58Q9Y2X3 529 aaKnown RBP17.92■□□□□ 0.46
SPPL3-204ENST00000536996 WDR90Q96KV7 1748 aa17.92■□□□□ 0.46
SPPL3-204ENST00000536996 TAF5LO75529 589 aa17.91■□□□□ 0.46
SPPL3-204ENST00000536996 KCNJ4P48050 445 aa17.91■□□□□ 0.46
SPPL3-204ENST00000536996 UBE4AQ14139 1066 aa17.91■□□□□ 0.46
SPPL3-204ENST00000536996 SIRT2Q8IXJ6 389 aa17.9■□□□□ 0.46
SPPL3-204ENST00000536996 NIM1KQ8IY84 436 aa17.9■□□□□ 0.46
SPPL3-204ENST00000536996 IRS2Q9Y4H2 1338 aa17.9■□□□□ 0.46
SPPL3-204ENST00000536996 FZD9O00144 591 aa17.89■□□□□ 0.45
SPPL3-204ENST00000536996 G3BP1Q13283 466 aaKnown RBP eCLIP17.89■□□□□ 0.45
SPPL3-204ENST00000536996 CEP126Q9P2H0 1117 aa17.89■□□□□ 0.45
SPPL3-204ENST00000536996 WTIPA6NIX2 430 aaPredicted RBP17.88■□□□□ 0.45
SPPL3-204ENST00000536996 RIMBP2O15034 1052 aa17.88■□□□□ 0.45
SPPL3-204ENST00000536996 FGFR2P21802 821 aa17.88■□□□□ 0.45
SPPL3-204ENST00000536996 PUM3Q15397 648 aaKnown RBP17.88■□□□□ 0.45
SPPL3-204ENST00000536996 GPR101Q96P66 508 aaPredicted RBP17.88■□□□□ 0.45
SPPL3-204ENST00000536996 ZNRF3Q9ULT6 936 aa17.88■□□□□ 0.45
SPPL3-204ENST00000536996 SURF6O75683 361 aaKnown RBP17.87■□□□□ 0.45
SPPL3-204ENST00000536996 HSP90AB4PQ58FF6 505 aa17.87■□□□□ 0.45
SPPL3-204ENST00000536996 AKAP11Q9UKA4 1901 aa17.86■□□□□ 0.45
SPPL3-204ENST00000536996 YY1P25490 414 aa17.86■□□□□ 0.45
SPPL3-204ENST00000536996 TXNRD3Q86VQ6 643 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms