RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ANKIB1Q9P2G1 1089 aa16.66■□□□□ 0.26
PRKDC-206ENST00000536429 ZNRF3Q9ULT6 936 aa16.66■□□□□ 0.26
PRKDC-206ENST00000536429 RAD17O75943 681 aa16.65■□□□□ 0.26
PRKDC-206ENST00000536429 BRPF1P55201 1214 aaPredicted RBP16.65■□□□□ 0.26
PRKDC-206ENST00000536429 CXCL9Q07325 125 aa16.65■□□□□ 0.26
PRKDC-206ENST00000536429 DOK7Q18PE1 504 aa16.65■□□□□ 0.26
PRKDC-206ENST00000536429 TAF1DQ9H5J8 278 aaPredicted RBP16.65■□□□□ 0.26
PRKDC-206ENST00000536429 DBNDD1Q9H9R9 158 aa16.65■□□□□ 0.26
PRKDC-206ENST00000536429 GGA1Q9UJY5 639 aa16.65■□□□□ 0.26
PRKDC-206ENST00000536429 CHMP3Q9Y3E7 222 aa16.65■□□□□ 0.26
PRKDC-206ENST00000536429 UTYO14607 1347 aa16.65■□□□□ 0.26
PRKDC-206ENST00000536429 ZBED9Q6R2W3 1325 aa16.65■□□□□ 0.26
PRKDC-206ENST00000536429 BCAR3O75815 825 aa16.64■□□□□ 0.25
PRKDC-206ENST00000536429 IGHMBP2P38935 993 aaKnown RBP16.64■□□□□ 0.25
PRKDC-206ENST00000536429 SCNN1DP51172 638 aa16.64■□□□□ 0.25
PRKDC-206ENST00000536429 KCNQ5Q9NR82 932 aa16.64■□□□□ 0.25
PRKDC-206ENST00000536429 XDHP47989 1333 aa16.64■□□□□ 0.25
PRKDC-206ENST00000536429 ANKRD18BA2A2Z9 1011 aa16.63■□□□□ 0.25
PRKDC-206ENST00000536429 HSPA6P17066 643 aa16.63■□□□□ 0.25
PRKDC-206ENST00000536429 ZNF594Q96JF6 807 aaPredicted RBP16.63■□□□□ 0.25
PRKDC-206ENST00000536429 USP44Q9H0E7 712 aa16.63■□□□□ 0.25
PRKDC-206ENST00000536429 HACL1Q9UJ83 578 aa16.63■□□□□ 0.25
PRKDC-206ENST00000536429 TNNQ9UQP3 1299 aa16.63■□□□□ 0.25
PRKDC-206ENST00000536429 IQCA1LA6NCM1 817 aa16.62■□□□□ 0.25
PRKDC-206ENST00000536429 EPHX2P34913 555 aa16.62■□□□□ 0.25
PRKDC-206ENST00000536429 EPS15P42566 896 aa16.62■□□□□ 0.25
PRKDC-206ENST00000536429 FSTL1Q12841 308 aa16.62■□□□□ 0.25
PRKDC-206ENST00000536429 IFIT5Q13325 482 aaKnown RBP16.62■□□□□ 0.25
PRKDC-206ENST00000536429 CIAPIN1Q6FI81 312 aa16.62■□□□□ 0.25
PRKDC-206ENST00000536429 ANKRD44Q8N8A2 993 aa16.62■□□□□ 0.25
PRKDC-206ENST00000536429 SMC1BQ8NDV3 1235 aa16.62■□□□□ 0.25
PRKDC-206ENST00000536429 EYA3Q99504 573 aa16.62■□□□□ 0.25
PRKDC-206ENST00000536429 BICC1Q9H694 974 aaKnown RBP16.62■□□□□ 0.25
PRKDC-206ENST00000536429 MYH3P11055 1940 aa16.62■□□□□ 0.25
PRKDC-206ENST00000536429 SNAP23O00161 211 aa16.61■□□□□ 0.25
PRKDC-206ENST00000536429 ECE2O60344 883 aa16.61■□□□□ 0.25
PRKDC-206ENST00000536429 ATP2B4P23634 1241 aa16.61■□□□□ 0.25
PRKDC-206ENST00000536429 KLRK1P26718 216 aa16.61■□□□□ 0.25
PRKDC-206ENST00000536429 GMPSP49915 693 aaPredicted RBP16.61■□□□□ 0.25
PRKDC-206ENST00000536429 MPHOSPH8Q99549 860 aa16.61■□□□□ 0.25
PRKDC-206ENST00000536429 API5Q9BZZ5 524 aaKnown RBP16.61■□□□□ 0.25
PRKDC-206ENST00000536429 ZC3H12CQ9C0D7 883 aaKnown RBP16.61■□□□□ 0.25
PRKDC-206ENST00000536429 SHTN1A0MZ66 631 aa16.6■□□□□ 0.25
PRKDC-206ENST00000536429 PSMD14O00487 310 aa16.6■□□□□ 0.25
PRKDC-206ENST00000536429 CCT4P50991 539 aaKnown RBP16.6■□□□□ 0.25
PRKDC-206ENST00000536429 HTRA3P83110 453 aa16.6■□□□□ 0.25
PRKDC-206ENST00000536429 CHRNDQ07001 517 aa16.6■□□□□ 0.25
PRKDC-206ENST00000536429 EAPPQ56P03 285 aaPredicted RBP16.6■□□□□ 0.25
PRKDC-206ENST00000536429 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
PRKDC-206ENST00000536429 CCDC57Q2TAC2 916 aa16.59■□□□□ 0.25
PRKDC-206ENST00000536429 RABL6Q3YEC7 729 aaPredicted RBP16.59■□□□□ 0.25
PRKDC-206ENST00000536429 TXNRD3Q86VQ6 643 aa16.59■□□□□ 0.25
PRKDC-206ENST00000536429 HELBQ8NG08 1087 aaPredicted RBP16.59■□□□□ 0.25
PRKDC-206ENST00000536429 KIF16BQ96L93 1317 aa16.59■□□□□ 0.25
PRKDC-206ENST00000536429 TAF5LO75529 589 aa16.58■□□□□ 0.24
PRKDC-206ENST00000536429 TRIM27P14373 513 aa16.58■□□□□ 0.24
PRKDC-206ENST00000536429 CHADLQ6NUI6 762 aa16.58■□□□□ 0.24
PRKDC-206ENST00000536429 FRAT1Q92837 279 aaPredicted RBP16.58■□□□□ 0.24
PRKDC-206ENST00000536429 PUS3Q9BZE2 481 aaKnown RBP16.58■□□□□ 0.24
PRKDC-206ENST00000536429 GPRC5DQ9NZD1 345 aa16.58■□□□□ 0.24
PRKDC-206ENST00000536429 SPEF2Q9C093 1822 aa16.58■□□□□ 0.24
PRKDC-206ENST00000536429 ZNF804BA4D1E1 1349 aa16.57■□□□□ 0.24
PRKDC-206ENST00000536429 LMOD1P29536 600 aaPredicted RBP16.57■□□□□ 0.24
PRKDC-206ENST00000536429 TNIP1Q15025 636 aa16.57■□□□□ 0.24
PRKDC-206ENST00000536429 LDHDQ86WU2 507 aa16.57■□□□□ 0.24
PRKDC-206ENST00000536429 ARHGAP45Q92619 1136 aa16.57■□□□□ 0.24
PRKDC-206ENST00000536429 MED23Q9ULK4 1368 aa16.56■□□□□ 0.24
PRKDC-206ENST00000536429 TAF7LQ5H9L4 462 aa16.56■□□□□ 0.24
PRKDC-206ENST00000536429 LDHAL6AQ6ZMR3 332 aa16.56■□□□□ 0.24
PRKDC-206ENST00000536429 KLHDC4Q8TBB5 520 aa16.56■□□□□ 0.24
PRKDC-206ENST00000536429 MEIS3Q99687 375 aa16.56■□□□□ 0.24
PRKDC-206ENST00000536429 ANKRD2Q9GZV1 360 aa16.56■□□□□ 0.24
PRKDC-206ENST00000536429 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
PRKDC-206ENST00000536429 LEMD3Q9Y2U8 911 aa16.56■□□□□ 0.24
PRKDC-206ENST00000536429 SCN4AP35499 1836 aa16.56■□□□□ 0.24
PRKDC-206ENST00000536429 IRS2Q9Y4H2 1338 aa16.55■□□□□ 0.24
PRKDC-206ENST00000536429 G3V3G9 751 aa16.55■□□□□ 0.24
PRKDC-206ENST00000536429 DCAF8Q5TAQ9 597 aa16.55■□□□□ 0.24
PRKDC-206ENST00000536429 MAP1SQ66K74 1059 aaPredicted RBP16.55■□□□□ 0.24
PRKDC-206ENST00000536429 ATF7IPQ6VMQ6 1270 aa16.55■□□□□ 0.24
PRKDC-206ENST00000536429 TRPM4Q8TD43 1214 aa16.55■□□□□ 0.24
PRKDC-206ENST00000536429 CLUAP1Q96AJ1 413 aa16.55■□□□□ 0.24
PRKDC-206ENST00000536429 CNNM1Q9NRU3 951 aa16.55■□□□□ 0.24
PRKDC-206ENST00000536429 PLIN1O60240 522 aa16.54■□□□□ 0.24
PRKDC-206ENST00000536429 VIL1P09327 827 aaKnown RBP16.54■□□□□ 0.24
PRKDC-206ENST00000536429 UBTFL1P0CB47 393 aaPredicted RBP16.54■□□□□ 0.24
PRKDC-206ENST00000536429 APLP1P51693 650 aa16.54■□□□□ 0.24
PRKDC-206ENST00000536429 HIRAP54198 1017 aaPredicted RBP16.54■□□□□ 0.24
PRKDC-206ENST00000536429 LRRC24Q50LG9 513 aa16.54■□□□□ 0.24
PRKDC-206ENST00000536429 INTS3Q68E01 1043 aaKnown RBP16.54■□□□□ 0.24
PRKDC-206ENST00000536429 PNMA8AQ86V59 439 aaPredicted RBP16.54■□□□□ 0.24
PRKDC-206ENST00000536429 CNOT7Q9UIV1 285 aaKnown RBP16.54■□□□□ 0.24
PRKDC-206ENST00000536429 SCN9AQ15858 1988 aa16.54■□□□□ 0.24
PRKDC-206ENST00000536429 ADAMTSL1Q8N6G6 1762 aa16.54■□□□□ 0.24
PRKDC-206ENST00000536429 IPO8O15397 1037 aaKnown RBP16.53■□□□□ 0.24
PRKDC-206ENST00000536429 KCNJ4P48050 445 aa16.53■□□□□ 0.24
PRKDC-206ENST00000536429 RFX5P48382 616 aaPredicted RBP16.53■□□□□ 0.24
PRKDC-206ENST00000536429 MICALL2Q8IY33 904 aa16.53■□□□□ 0.24
PRKDC-206ENST00000536429 MXD3Q9BW11 206 aa16.53■□□□□ 0.24
PRKDC-206ENST00000536429 ADARB2Q9NS39 739 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms