RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 GCKRQ14397 625 aa13.48□□□□□ -0.25
UBE3B-205ENST00000535900 SLC51AQ86UW1 340 aa13.48□□□□□ -0.25
UBE3B-205ENST00000535900 CCDC136Q96JN2 1154 aa13.48□□□□□ -0.25
UBE3B-205ENST00000535900 CWC25Q9NXE8 425 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-205ENST00000535900 C9orf78Q9NZ63 289 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-205ENST00000535900 CNTNAP1P78357 1384 aa13.47□□□□□ -0.25
UBE3B-205ENST00000535900 PASKQ96RG2 1323 aa13.47□□□□□ -0.25
UBE3B-205ENST00000535900 COL13A1Q5TAT6 717 aaPredicted RBP13.47□□□□□ -0.25
UBE3B-205ENST00000535900 NLRP10Q86W26 655 aa13.47□□□□□ -0.25
UBE3B-205ENST00000535900 RPAP2Q8IXW5 612 aaPredicted RBP13.47□□□□□ -0.25
UBE3B-205ENST00000535900 TRMT112Q9UI30 125 aaKnown RBP13.47□□□□□ -0.25
UBE3B-205ENST00000535900 LRRC37AA6NMS7 1700 aa13.47□□□□□ -0.25
UBE3B-205ENST00000535900 SH3TC1Q8TE82 1336 aa13.46□□□□□ -0.25
UBE3B-205ENST00000535900 AOC3Q16853 763 aa13.46□□□□□ -0.25
UBE3B-205ENST00000535900 MAP1SQ66K74 1059 aaPredicted RBP13.46□□□□□ -0.25
UBE3B-205ENST00000535900 TNS4Q8IZW8 715 aa13.46□□□□□ -0.25
UBE3B-205ENST00000535900 MEIS3Q99687 375 aa13.46□□□□□ -0.25
UBE3B-205ENST00000535900 RWDD1Q9H446 243 aaPredicted RBP13.46□□□□□ -0.25
UBE3B-205ENST00000535900 ATP6V0A2Q9Y487 856 aa13.46□□□□□ -0.25
UBE3B-205ENST00000535900 TMEM88BA6NKF7 163 aa13.45□□□□□ -0.26
UBE3B-205ENST00000535900 HCLS1P14317 486 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-205ENST00000535900 HDAC1Q13547 482 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-205ENST00000535900 CWF19L2Q2TBE0 894 aaKnown RBP13.45□□□□□ -0.26
UBE3B-205ENST00000535900 DDX46Q7L014 1031 aaKnown RBP13.45□□□□□ -0.26
UBE3B-205ENST00000535900 SUPT20HQ8NEM7 779 aa13.45□□□□□ -0.26
UBE3B-205ENST00000535900 H7C1W4 665 aa13.44□□□□□ -0.26
UBE3B-205ENST00000535900 HMMRO75330 724 aa13.44□□□□□ -0.26
UBE3B-205ENST00000535900 PCCAP05165 728 aaPredicted RBP13.44□□□□□ -0.26
UBE3B-205ENST00000535900 SLC10A5Q5PT55 438 aa13.44□□□□□ -0.26
UBE3B-205ENST00000535900 DPP8Q6V1X1 898 aaPredicted RBP13.44□□□□□ -0.26
UBE3B-205ENST00000535900 ZBTB38Q8NAP3 1195 aaPredicted RBP13.44□□□□□ -0.26
UBE3B-205ENST00000535900 ATP5J2-PTCD1G3V325 749 aa13.43□□□□□ -0.26
UBE3B-205ENST00000535900 ITGBL1O95965 494 aaPredicted RBP13.43□□□□□ -0.26
UBE3B-205ENST00000535900 TAF1P21675 1872 aa13.43□□□□□ -0.26
UBE3B-205ENST00000535900 SCNN1DP51172 638 aa13.43□□□□□ -0.26
UBE3B-205ENST00000535900 GRAPQ13588 217 aa13.43□□□□□ -0.26
UBE3B-205ENST00000535900 CNTROBQ8N137 903 aa13.43□□□□□ -0.26
UBE3B-205ENST00000535900 ANKRD44Q8N8A2 993 aa13.43□□□□□ -0.26
UBE3B-205ENST00000535900 GRAPLQ8TC17 118 aaPredicted RBP13.43□□□□□ -0.26
UBE3B-205ENST00000535900 DUOX1Q9NRD9 1551 aa13.43□□□□□ -0.26
UBE3B-205ENST00000535900 CDHR2Q9BYE9 1310 aa13.42□□□□□ -0.26
UBE3B-205ENST00000535900 CAPN15O75808 1086 aa13.42□□□□□ -0.26
UBE3B-205ENST00000535900 BBOX1O75936 387 aa13.42□□□□□ -0.26
UBE3B-205ENST00000535900 NBPF7P0C2Y1 421 aaPredicted RBP13.42□□□□□ -0.26
UBE3B-205ENST00000535900 EPS15P42566 896 aa13.42□□□□□ -0.26
UBE3B-205ENST00000535900 MTX1Q13505 466 aa13.42□□□□□ -0.26
UBE3B-205ENST00000535900 CENPQQ7L2Z9 268 aaPredicted RBP13.42□□□□□ -0.26
UBE3B-205ENST00000535900 MPNDQ8N594 471 aa13.42□□□□□ -0.26
UBE3B-205ENST00000535900 AIDAQ96BJ3 306 aa13.42□□□□□ -0.26
UBE3B-205ENST00000535900 PLA2G12BQ9BX93 195 aa13.42□□□□□ -0.26
UBE3B-205ENST00000535900 ABT1Q9ULW3 272 aaKnown RBP13.42□□□□□ -0.26
UBE3B-205ENST00000535900 PCDHB15Q9Y5E8 787 aa13.42□□□□□ -0.26
UBE3B-205ENST00000535900 CASP7P55210 303 aa13.41□□□□□ -0.26
UBE3B-205ENST00000535900 ATP8B2P98198 1209 aa13.41□□□□□ -0.26
UBE3B-205ENST00000535900 B4GALNT3Q6L9W6 998 aa13.41□□□□□ -0.26
UBE3B-205ENST00000535900 CEP85Q6P2H3 762 aa13.41□□□□□ -0.26
UBE3B-205ENST00000535900 TMC4Q7Z404 712 aa13.41□□□□□ -0.26
UBE3B-205ENST00000535900 SP8Q8IXZ3 490 aa13.41□□□□□ -0.26
UBE3B-205ENST00000535900 VPS33BQ9H267 617 aa13.41□□□□□ -0.26
UBE3B-205ENST00000535900 LRRFIP2Q9Y608 721 aaKnown RBP13.41□□□□□ -0.26
UBE3B-205ENST00000535900 THSD7BQ9C0I4 1608 aa13.41□□□□□ -0.26
UBE3B-205ENST00000535900 TRPM7Q96QT4 1865 aa13.4□□□□□ -0.26
UBE3B-205ENST00000535900 PCNTO95613 3336 aa13.4□□□□□ -0.26
UBE3B-205ENST00000535900 VEGFBP49765 207 aa13.4□□□□□ -0.26
UBE3B-205ENST00000535900 KIAA2012Q0VF49 1180 aa13.4□□□□□ -0.26
UBE3B-205ENST00000535900 PAXIP1Q6ZW49 1069 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-205ENST00000535900 USP50Q70EL3 339 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-205ENST00000535900 UBE3BQ7Z3V4 1068 aa13.4□□□□□ -0.26
UBE3B-205ENST00000535900 RTFDC1Q9BY42 306 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-205ENST00000535900 ZNRF3Q9ULT6 936 aa13.4□□□□□ -0.26
UBE3B-205ENST00000535900 GMPSP49915 693 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-205ENST00000535900 RABL6Q3YEC7 729 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-205ENST00000535900 RTL5Q5HYW3 569 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-205ENST00000535900 CIAPIN1Q6FI81 312 aa13.39□□□□□ -0.27
UBE3B-205ENST00000535900 GCC1Q96CN9 775 aa13.39□□□□□ -0.27
UBE3B-205ENST00000535900 FAM89AQ96GI7 184 aa13.39□□□□□ -0.27
UBE3B-205ENST00000535900 ADARB2Q9NS39 739 aaKnown RBP13.39□□□□□ -0.27
UBE3B-205ENST00000535900 GPRC5DQ9NZD1 345 aa13.39□□□□□ -0.27
UBE3B-205ENST00000535900 COL4A1P02462 1669 aa13.38□□□□□ -0.27
UBE3B-205ENST00000535900 RASSF10A6NK89 507 aa13.38□□□□□ -0.27
UBE3B-205ENST00000535900 FOXN1O15353 648 aa13.38□□□□□ -0.27
UBE3B-205ENST00000535900 CXCL9Q07325 125 aa13.38□□□□□ -0.27
UBE3B-205ENST00000535900 SSH3Q8TE77 659 aa13.38□□□□□ -0.27
UBE3B-205ENST00000535900 RAD17O75943 681 aa13.37□□□□□ -0.27
UBE3B-205ENST00000535900 POLA2Q14181 598 aa13.37□□□□□ -0.27
UBE3B-205ENST00000535900 DEFB115Q30KQ5 88 aa13.37□□□□□ -0.27
UBE3B-205ENST00000535900 HSP90AB4PQ58FF6 505 aa13.37□□□□□ -0.27
UBE3B-205ENST00000535900 CELF1Q92879 486 aaKnown RBP13.37□□□□□ -0.27
UBE3B-205ENST00000535900 SUCLG2Q96I99 432 aa13.37□□□□□ -0.27
UBE3B-205ENST00000535900 C1orf115Q9H7X2 142 aa13.37□□□□□ -0.27
UBE3B-205ENST00000535900 IRS4O14654 1257 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-205ENST00000535900 PDE8AO60658 829 aa13.36□□□□□ -0.27
UBE3B-205ENST00000535900 CTCFP49711 727 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-205ENST00000535900 GRM1Q13255 1194 aa13.36□□□□□ -0.27
UBE3B-205ENST00000535900 TNIP1Q15025 636 aa13.36□□□□□ -0.27
UBE3B-205ENST00000535900 SF3B3Q15393 1217 aaKnown RBP13.36□□□□□ -0.27
UBE3B-205ENST00000535900 SIRT2Q8IXJ6 389 aa13.36□□□□□ -0.27
UBE3B-205ENST00000535900 SMC5Q8IY18 1101 aa13.36□□□□□ -0.27
UBE3B-205ENST00000535900 KAZALD1Q96I82 304 aa13.36□□□□□ -0.27
UBE3B-205ENST00000535900 BICC1Q9H694 974 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms