RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 DZIP1LQ8IYY4 767 aaKnown RBP16.53■□□□□ 0.24
CHFR-210ENST00000535527 LRRFIP2Q9Y608 721 aaKnown RBP16.53■□□□□ 0.24
CHFR-210ENST00000535527 PSME4Q14997 1843 aa16.53■□□□□ 0.24
CHFR-210ENST00000535527 IPO8O15397 1037 aaKnown RBP16.52■□□□□ 0.24
CHFR-210ENST00000535527 ZNF594Q96JF6 807 aaPredicted RBP16.52■□□□□ 0.24
CHFR-210ENST00000535527 PASKQ96RG2 1323 aa16.51■□□□□ 0.23
CHFR-210ENST00000535527 IQCA1LA6NCM1 817 aa16.51■□□□□ 0.23
CHFR-210ENST00000535527 ITGA6P23229 1130 aa16.51■□□□□ 0.23
CHFR-210ENST00000535527 RFX5P48382 616 aaPredicted RBP16.51■□□□□ 0.23
CHFR-210ENST00000535527 CCDC152Q4G0S7 254 aa16.51■□□□□ 0.23
CHFR-210ENST00000535527 DDX46Q7L014 1031 aaKnown RBP16.51■□□□□ 0.23
CHFR-210ENST00000535527 LDHDQ86WU2 507 aa16.51■□□□□ 0.23
CHFR-210ENST00000535527 C1orf115Q9H7X2 142 aa16.51■□□□□ 0.23
CHFR-210ENST00000535527 ATP6V0A2Q9Y487 856 aa16.51■□□□□ 0.23
CHFR-210ENST00000535527 ARAP2Q8WZ64 1704 aa16.5■□□□□ 0.23
CHFR-210ENST00000535527 ALDH1B1P30837 517 aa16.5■□□□□ 0.23
CHFR-210ENST00000535527 RRP1P56182 461 aaKnown RBP16.5■□□□□ 0.23
CHFR-210ENST00000535527 KLHDC4Q8TBB5 520 aa16.5■□□□□ 0.23
CHFR-210ENST00000535527 GPR101Q96P66 508 aaPredicted RBP16.5■□□□□ 0.23
CHFR-210ENST00000535527 WBP1LQ9NX94 342 aa16.5■□□□□ 0.23
CHFR-210ENST00000535527 COG6Q9Y2V7 657 aa16.5■□□□□ 0.23
CHFR-210ENST00000535527 TMEM88BA6NKF7 163 aa16.49■□□□□ 0.23
CHFR-210ENST00000535527 DDNO94850 711 aaPredicted RBP16.49■□□□□ 0.23
CHFR-210ENST00000535527 VEGFBP49765 207 aa16.49■□□□□ 0.23
CHFR-210ENST00000535527 GPSM2P81274 684 aa16.49■□□□□ 0.23
CHFR-210ENST00000535527 CCDC93Q567U6 631 aa16.49■□□□□ 0.23
CHFR-210ENST00000535527 SOGA3Q5TF21 947 aa16.49■□□□□ 0.23
CHFR-210ENST00000535527 PUS3Q9BZE2 481 aaKnown RBP16.49■□□□□ 0.23
CHFR-210ENST00000535527 TAOK3Q9H2K8 898 aa16.49■□□□□ 0.23
CHFR-210ENST00000535527 PCDH10Q9P2E7 1040 aa16.49■□□□□ 0.23
CHFR-210ENST00000535527 ZBTB7BO15156 539 aaPredicted RBP16.48■□□□□ 0.23
CHFR-210ENST00000535527 UBTFL1P0CB47 393 aaPredicted RBP16.48■□□□□ 0.23
CHFR-210ENST00000535527 POTEIP0CG38 1075 aa16.48■□□□□ 0.23
CHFR-210ENST00000535527 POTEJP0CG39 1038 aa16.48■□□□□ 0.23
CHFR-210ENST00000535527 RPS8P62241 208 aaKnown RBP16.48■□□□□ 0.23
CHFR-210ENST00000535527 ITPRIPQ8IWB1 547 aa16.48■□□□□ 0.23
CHFR-210ENST00000535527 L3MBTL3Q96JM7 780 aaPredicted RBP16.48■□□□□ 0.23
CHFR-210ENST00000535527 SNAP23O00161 211 aa16.47■□□□□ 0.23
CHFR-210ENST00000535527 MVPQ14764 893 aaKnown RBP16.47■□□□□ 0.23
CHFR-210ENST00000535527 SP8Q8IXZ3 490 aa16.47■□□□□ 0.23
CHFR-210ENST00000535527 FTSJ3Q8IY81 847 aaKnown RBP16.47■□□□□ 0.23
CHFR-210ENST00000535527 ZNF277Q9NRM2 450 aaPredicted RBP16.47■□□□□ 0.23
CHFR-210ENST00000535527 CHMP3Q9Y3E7 222 aa16.47■□□□□ 0.23
CHFR-210ENST00000535527 PNMA6EA0A0J9YXQ4 647 aa16.46■□□□□ 0.23
CHFR-210ENST00000535527 BBOX1O75936 387 aa16.46■□□□□ 0.23
CHFR-210ENST00000535527 ITGBL1O95965 494 aaPredicted RBP16.46■□□□□ 0.23
CHFR-210ENST00000535527 LBX1P52954 281 aa16.46■□□□□ 0.23
CHFR-210ENST00000535527 TAF1DQ9H5J8 278 aaPredicted RBP16.46■□□□□ 0.23
CHFR-210ENST00000535527 SCN4AP35499 1836 aa16.46■□□□□ 0.23
CHFR-210ENST00000535527 IRS2Q9Y4H2 1338 aa16.45■□□□□ 0.22
CHFR-210ENST00000535527 KLRK1P26718 216 aa16.45■□□□□ 0.22
CHFR-210ENST00000535527 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
CHFR-210ENST00000535527 LRRC24Q50LG9 513 aa16.45■□□□□ 0.22
CHFR-210ENST00000535527 ANKRD18AQ8IVF6 992 aa16.45■□□□□ 0.22
CHFR-210ENST00000535527 ABHD8Q96I13 439 aa16.45■□□□□ 0.22
CHFR-210ENST00000535527 POLLQ9UGP5 575 aa16.45■□□□□ 0.22
CHFR-210ENST00000535527 MINPP1Q9UNW1 487 aa16.45■□□□□ 0.22
CHFR-210ENST00000535527 PA2G4Q9UQ80 394 aaKnown RBP16.45■□□□□ 0.22
CHFR-210ENST00000535527 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.45■□□□□ 0.22
CHFR-210ENST00000535527 MAP2K1Q02750 393 aaPredicted RBP16.44■□□□□ 0.22
CHFR-210ENST00000535527 PTPN12Q05209 780 aaKnown RBP16.44■□□□□ 0.22
CHFR-210ENST00000535527 RTFDC1Q9BY42 306 aaPredicted RBP16.44■□□□□ 0.22
CHFR-210ENST00000535527 MYH13Q9UKX3 1938 aa16.44■□□□□ 0.22
CHFR-210ENST00000535527 ANKRD18BA2A2Z9 1011 aa16.43■□□□□ 0.22
CHFR-210ENST00000535527 RASSF10A6NK89 507 aa16.43■□□□□ 0.22
CHFR-210ENST00000535527 HSP90B1P14625 803 aaKnown RBP16.43■□□□□ 0.22
CHFR-210ENST00000535527 IFIT5Q13325 482 aaKnown RBP16.43■□□□□ 0.22
CHFR-210ENST00000535527 MTX1Q13505 466 aa16.43■□□□□ 0.22
CHFR-210ENST00000535527 PDE3AQ14432 1141 aa16.43■□□□□ 0.22
CHFR-210ENST00000535527 DEFB115Q30KQ5 88 aa16.43■□□□□ 0.22
CHFR-210ENST00000535527 HELBQ8NG08 1087 aaPredicted RBP16.43■□□□□ 0.22
CHFR-210ENST00000535527 CDC5LQ99459 802 aaKnown RBP16.43■□□□□ 0.22
CHFR-210ENST00000535527 PSMD1Q99460 953 aa16.43■□□□□ 0.22
CHFR-210ENST00000535527 BSDC1Q9NW68 430 aaPredicted RBP16.43■□□□□ 0.22
CHFR-210ENST00000535527 GNAI3P08754 354 aa16.42■□□□□ 0.22
CHFR-210ENST00000535527 HSPA8P11142 646 aaKnown RBP16.42■□□□□ 0.22
CHFR-210ENST00000535527 ATG9AQ7Z3C6 839 aa16.42■□□□□ 0.22
CHFR-210ENST00000535527 TBC1D16Q8TBP0 767 aa16.42■□□□□ 0.22
CHFR-210ENST00000535527 ZBTB40Q9NUA8 1239 aa16.42■□□□□ 0.22
CHFR-210ENST00000535527 ZNF541Q9H0D2 1346 aa16.42■□□□□ 0.22
CHFR-210ENST00000535527 TAF5LO75529 589 aa16.41■□□□□ 0.22
CHFR-210ENST00000535527 RGS19P49795 217 aa16.41■□□□□ 0.22
CHFR-210ENST00000535527 CHRNDQ07001 517 aa16.41■□□□□ 0.22
CHFR-210ENST00000535527 AOC3Q16853 763 aa16.41■□□□□ 0.22
CHFR-210ENST00000535527 PNMA8AQ86V59 439 aaPredicted RBP16.41■□□□□ 0.22
CHFR-210ENST00000535527 TXNRD3Q86VQ6 643 aa16.41■□□□□ 0.22
CHFR-210ENST00000535527 SIRT2Q8IXJ6 389 aa16.41■□□□□ 0.22
CHFR-210ENST00000535527 MPNDQ8N594 471 aa16.41■□□□□ 0.22
CHFR-210ENST00000535527 VGLL2Q8N8G2 317 aa16.41■□□□□ 0.22
CHFR-210ENST00000535527 CRBNQ96SW2 442 aa16.41■□□□□ 0.22
CHFR-210ENST00000535527 PODXL2Q9NZ53 605 aa16.41■□□□□ 0.22
CHFR-210ENST00000535527 RIPOR2Q9Y4F9 1068 aa16.41■□□□□ 0.22
CHFR-210ENST00000535527 ADAMTSL1Q8N6G6 1762 aa16.41■□□□□ 0.22
CHFR-210ENST00000535527 GNAI2P04899 355 aa16.4■□□□□ 0.22
CHFR-210ENST00000535527 IARSP41252 1262 aaKnown RBP16.4■□□□□ 0.22
CHFR-210ENST00000535527 MLLT1Q03111 559 aaPredicted RBP16.4■□□□□ 0.22
CHFR-210ENST00000535527 CCDC57Q2TAC2 916 aa16.4■□□□□ 0.22
CHFR-210ENST00000535527 CC2D2BQ6DHV5 1058 aa16.4■□□□□ 0.22
CHFR-210ENST00000535527 CEP85Q6P2H3 762 aa16.4■□□□□ 0.22
CHFR-210ENST00000535527 DPP8Q6V1X1 898 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms