RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 LDHAL6AQ6ZMR3 332 aa16.4■□□□□ 0.22
TMEM258-202ENST00000535042 PSMD1Q99460 953 aa16.4■□□□□ 0.22
TMEM258-202ENST00000535042 TMX4Q9H1E5 349 aaPredicted RBP16.4■□□□□ 0.22
TMEM258-202ENST00000535042 NSFL1CQ9UNZ2 370 aaKnown RBP16.4■□□□□ 0.22
TMEM258-202ENST00000535042 LRRC37AA6NMS7 1700 aa16.39■□□□□ 0.21
TMEM258-202ENST00000535042 GRIPAP1Q4V328 841 aa16.39■□□□□ 0.21
TMEM258-202ENST00000535042 CEP85Q6P2H3 762 aa16.39■□□□□ 0.21
TMEM258-202ENST00000535042 DPP8Q6V1X1 898 aaPredicted RBP16.39■□□□□ 0.21
TMEM258-202ENST00000535042 RTFDC1Q9BY42 306 aaPredicted RBP16.39■□□□□ 0.21
TMEM258-202ENST00000535042 ZNF277Q9NRM2 450 aaPredicted RBP16.39■□□□□ 0.21
TMEM258-202ENST00000535042 POLLQ9UGP5 575 aa16.39■□□□□ 0.21
TMEM258-202ENST00000535042 PA2G4Q9UQ80 394 aaKnown RBP16.39■□□□□ 0.21
TMEM258-202ENST00000535042 RIPOR2Q9Y4F9 1068 aa16.39■□□□□ 0.21
TMEM258-202ENST00000535042 FER1L6Q2WGJ9 1857 aa16.38■□□□□ 0.21
TMEM258-202ENST00000535042 CHRNDQ07001 517 aa16.38■□□□□ 0.21
TMEM258-202ENST00000535042 POLA2Q14181 598 aa16.38■□□□□ 0.21
TMEM258-202ENST00000535042 HELBQ8NG08 1087 aaPredicted RBP16.38■□□□□ 0.21
TMEM258-202ENST00000535042 GPR101Q96P66 508 aaPredicted RBP16.38■□□□□ 0.21
TMEM258-202ENST00000535042 CNNM1Q9NRU3 951 aa16.38■□□□□ 0.21
TMEM258-202ENST00000535042 PODXL2Q9NZ53 605 aa16.38■□□□□ 0.21
TMEM258-202ENST00000535042 DUOX1Q9NRD9 1551 aa16.38■□□□□ 0.21
TMEM258-202ENST00000535042 SNAP23O00161 211 aa16.37■□□□□ 0.21
TMEM258-202ENST00000535042 C9orf131Q5VYM1 1079 aa16.37■□□□□ 0.21
TMEM258-202ENST00000535042 SIRT2Q8IXJ6 389 aa16.37■□□□□ 0.21
TMEM258-202ENST00000535042 TBC1D16Q8TBP0 767 aa16.37■□□□□ 0.21
TMEM258-202ENST00000535042 SSH3Q8TE77 659 aa16.37■□□□□ 0.21
TMEM258-202ENST00000535042 CHMP4BQ9H444 224 aaKnown RBP16.37■□□□□ 0.21
TMEM258-202ENST00000535042 COPRSQ9NQ92 184 aa16.37■□□□□ 0.21
TMEM258-202ENST00000535042 ANKIB1Q9P2G1 1089 aa16.37■□□□□ 0.21
TMEM258-202ENST00000535042 XDHP47989 1333 aa16.37■□□□□ 0.21
TMEM258-202ENST00000535042 EYA2O00167 538 aa16.36■□□□□ 0.21
TMEM258-202ENST00000535042 TAF5LO75529 589 aa16.36■□□□□ 0.21
TMEM258-202ENST00000535042 LMNB1P20700 586 aa16.36■□□□□ 0.21
TMEM258-202ENST00000535042 ATG9AQ7Z3C6 839 aa16.36■□□□□ 0.21
TMEM258-202ENST00000535042 SIL1Q9H173 461 aa16.36■□□□□ 0.21
TMEM258-202ENST00000535042 RNF181Q9P0P0 153 aa16.36■□□□□ 0.21
TMEM258-202ENST00000535042 SPEF2Q9C093 1822 aa16.35■□□□□ 0.21
TMEM258-202ENST00000535042 C6orf229H3BNL8 230 aa16.35■□□□□ 0.21
TMEM258-202ENST00000535042 UFL1O94874 794 aa16.35■□□□□ 0.21
TMEM258-202ENST00000535042 IARSP41252 1262 aaKnown RBP16.35■□□□□ 0.21
TMEM258-202ENST00000535042 IRX6P78412 446 aaPredicted RBP16.35■□□□□ 0.21
TMEM258-202ENST00000535042 ANKRD2Q9GZV1 360 aa16.35■□□□□ 0.21
TMEM258-202ENST00000535042 GGA1Q9UJY5 639 aa16.35■□□□□ 0.21
TMEM258-202ENST00000535042 LTBP1Q14766 1721 aa16.35■□□□□ 0.21
TMEM258-202ENST00000535042 COL4A5P29400 1685 aa16.34■□□□□ 0.21
TMEM258-202ENST00000535042 ATP2B4P23634 1241 aa16.34■□□□□ 0.21
TMEM258-202ENST00000535042 AOC3Q16853 763 aa16.34■□□□□ 0.21
TMEM258-202ENST00000535042 RPAP2Q8IXW5 612 aaPredicted RBP16.34■□□□□ 0.21
TMEM258-202ENST00000535042 SUPT20HQ8NEM7 779 aa16.34■□□□□ 0.21
TMEM258-202ENST00000535042 EXOC6Q8TAG9 804 aa16.34■□□□□ 0.21
TMEM258-202ENST00000535042 RIMBP2O15034 1052 aa16.33■□□□□ 0.2
TMEM258-202ENST00000535042 PPIP5K2O43314 1243 aa16.33■□□□□ 0.2
TMEM258-202ENST00000535042 CIAO1O76071 339 aa16.33■□□□□ 0.2
TMEM258-202ENST00000535042 KLRK1P26718 216 aa16.33■□□□□ 0.2
TMEM258-202ENST00000535042 KIAA2012Q0VF49 1180 aa16.33■□□□□ 0.2
TMEM258-202ENST00000535042 METTL24Q5JXM2 366 aa16.33■□□□□ 0.2
TMEM258-202ENST00000535042 VGLL2Q8N8G2 317 aa16.33■□□□□ 0.2
TMEM258-202ENST00000535042 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
TMEM258-202ENST00000535042 LEMD3Q9Y2U8 911 aa16.33■□□□□ 0.2
TMEM258-202ENST00000535042 PCDHB15Q9Y5E8 787 aa16.33■□□□□ 0.2
TMEM258-202ENST00000535042 MROH5Q6ZUA9 1318 aa16.33■□□□□ 0.2
TMEM258-202ENST00000535042 ZNF804BA4D1E1 1349 aa16.32■□□□□ 0.2
TMEM258-202ENST00000535042 GOLGB1Q14789 3259 aaKnown RBP16.32■□□□□ 0.2
TMEM258-202ENST00000535042 WASHC4Q2M389 1173 aa16.32■□□□□ 0.2
TMEM258-202ENST00000535042 TXNRD3Q86VQ6 643 aa16.32■□□□□ 0.2
TMEM258-202ENST00000535042 LARGE2Q8N3Y3 721 aa16.32■□□□□ 0.2
TMEM258-202ENST00000535042 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.32■□□□□ 0.2
TMEM258-202ENST00000535042 IRS2Q9Y4H2 1338 aa16.31■□□□□ 0.2
TMEM258-202ENST00000535042 PDE8BO95263 885 aa16.31■□□□□ 0.2
TMEM258-202ENST00000535042 IL15P40933 162 aaPredicted RBP16.31■□□□□ 0.2
TMEM258-202ENST00000535042 EYA3Q99504 573 aa16.31■□□□□ 0.2
TMEM258-202ENST00000535042 VPS33BQ9H267 617 aa16.31■□□□□ 0.2
TMEM258-202ENST00000535042 NOP58Q9Y2X3 529 aaKnown RBP16.31■□□□□ 0.2
TMEM258-202ENST00000535042 SBF1O95248 1867 aa16.31■□□□□ 0.2
TMEM258-202ENST00000535042 SURF6O75683 361 aaKnown RBP16.3■□□□□ 0.2
TMEM258-202ENST00000535042 DOK7Q18PE1 504 aa16.3■□□□□ 0.2
TMEM258-202ENST00000535042 ZC3H12CQ9C0D7 883 aaKnown RBP16.3■□□□□ 0.2
TMEM258-202ENST00000535042 SASH1O94885 1247 aa16.29■□□□□ 0.2
TMEM258-202ENST00000535042 KCNJ4P48050 445 aa16.29■□□□□ 0.2
TMEM258-202ENST00000535042 TFCP2Q12800 502 aa16.29■□□□□ 0.2
TMEM258-202ENST00000535042 G3BP1Q13283 466 aaKnown RBP eCLIP16.29■□□□□ 0.2
TMEM258-202ENST00000535042 UBE4AQ14139 1066 aa16.29■□□□□ 0.2
TMEM258-202ENST00000535042 CEP126Q9P2H0 1117 aa16.29■□□□□ 0.2
TMEM258-202ENST00000535042 MED23Q9ULK4 1368 aa16.28■□□□□ 0.2
TMEM258-202ENST00000535042 YDJCA8MPS7 323 aa16.28■□□□□ 0.2
TMEM258-202ENST00000535042 FZD9O00144 591 aa16.28■□□□□ 0.2
TMEM258-202ENST00000535042 CENPBP07199 599 aaPredicted RBP16.28■□□□□ 0.2
TMEM258-202ENST00000535042 FGFR2P21802 821 aa16.28■□□□□ 0.2
TMEM258-202ENST00000535042 C15orf52Q6ZUT6 534 aaKnown RBP16.28■□□□□ 0.2
TMEM258-202ENST00000535042 NIM1KQ8IY84 436 aa16.28■□□□□ 0.2
TMEM258-202ENST00000535042 JDP2Q8WYK2 163 aa16.28■□□□□ 0.2
TMEM258-202ENST00000535042 DBNDD1Q9H9R9 158 aa16.28■□□□□ 0.2
TMEM258-202ENST00000535042 EXOC6BQ9Y2D4 811 aa16.28■□□□□ 0.2
TMEM258-202ENST00000535042 A0A1B0GUL6 1792 aa16.28■□□□□ 0.2
TMEM258-202ENST00000535042 ZNF541Q9H0D2 1346 aa16.27■□□□□ 0.2
TMEM258-202ENST00000535042 HMMRO75330 724 aa16.27■□□□□ 0.2
TMEM258-202ENST00000535042 ZNRF3Q9ULT6 936 aa16.27■□□□□ 0.2
TMEM258-202ENST00000535042 ECE2O60344 883 aa16.26■□□□□ 0.19
TMEM258-202ENST00000535042 YY1P25490 414 aa16.26■□□□□ 0.19
TMEM258-202ENST00000535042 PUM3Q15397 648 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms