RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 RTL9Q8NET4 1388 aa18■□□□□ 0.47
CCDC84-208ENST00000534656 HSP90B1P14625 803 aaKnown RBP17.99■□□□□ 0.47
CCDC84-208ENST00000534656 HUNKP57058 714 aa17.99■□□□□ 0.47
CCDC84-208ENST00000534656 NOGQ13253 232 aa17.99■□□□□ 0.47
CCDC84-208ENST00000534656 KRT26Q7Z3Y9 468 aa17.99■□□□□ 0.47
CCDC84-208ENST00000534656 ZC3H12CQ9C0D7 883 aaKnown RBP17.99■□□□□ 0.47
CCDC84-208ENST00000534656 SEC31BQ9NQW1 1179 aa17.99■□□□□ 0.47
CCDC84-208ENST00000534656 IFT57Q9NWB7 429 aa17.99■□□□□ 0.47
CCDC84-208ENST00000534656 VIL1P09327 827 aaKnown RBP17.98■□□□□ 0.47
CCDC84-208ENST00000534656 GNAI1P63096 354 aa17.98■□□□□ 0.47
CCDC84-208ENST00000534656 RBM26Q5T8P6 1007 aaKnown RBP17.98■□□□□ 0.47
CCDC84-208ENST00000534656 DCPSQ96C86 337 aaKnown RBP17.98■□□□□ 0.47
CCDC84-208ENST00000534656 MYD88Q99836 296 aa17.98■□□□□ 0.47
CCDC84-208ENST00000534656 ELL2O00472 640 aaPredicted RBP17.97■□□□□ 0.47
CCDC84-208ENST00000534656 PCCAP05165 728 aaPredicted RBP17.97■□□□□ 0.47
CCDC84-208ENST00000534656 CALD1Q05682 793 aaKnown RBP17.97■□□□□ 0.47
CCDC84-208ENST00000534656 CCDC191Q8NCU4 936 aa17.97■□□□□ 0.47
CCDC84-208ENST00000534656 ANKIB1Q9P2G1 1089 aa17.97■□□□□ 0.47
CCDC84-208ENST00000534656 CCDC85CA6NKD9 419 aa17.96■□□□□ 0.47
CCDC84-208ENST00000534656 G3V3G9 751 aa17.96■□□□□ 0.47
CCDC84-208ENST00000534656 APAF1O14727 1248 aa17.96■□□□□ 0.47
CCDC84-208ENST00000534656 PDE8AO60658 829 aa17.96■□□□□ 0.47
CCDC84-208ENST00000534656 UFL1O94874 794 aa17.96■□□□□ 0.47
CCDC84-208ENST00000534656 CCDC152Q4G0S7 254 aa17.96■□□□□ 0.47
CCDC84-208ENST00000534656 DCAF8Q5TAQ9 597 aa17.96■□□□□ 0.47
CCDC84-208ENST00000534656 C2orf69Q8N8R5 385 aa17.96■□□□□ 0.47
CCDC84-208ENST00000534656 ZIC5Q96T25 663 aa17.96■□□□□ 0.47
CCDC84-208ENST00000534656 PRKRIP1Q9H875 184 aaPredicted RBP17.96■□□□□ 0.47
CCDC84-208ENST00000534656 GBA2Q9HCG7 927 aaPredicted RBP17.96■□□□□ 0.47
CCDC84-208ENST00000534656 GGA1Q9UJY5 639 aa17.96■□□□□ 0.47
CCDC84-208ENST00000534656 ADM5C9JUS6 153 aa17.95■□□□□ 0.46
CCDC84-208ENST00000534656 KIF4BQ2VIQ3 1234 aa17.95■□□□□ 0.46
CCDC84-208ENST00000534656 FAM161AQ3B820 660 aa17.95■□□□□ 0.46
CCDC84-208ENST00000534656 RGMBQ6NW40 437 aa17.95■□□□□ 0.46
CCDC84-208ENST00000534656 CWC25Q9NXE8 425 aaPredicted RBP17.95■□□□□ 0.46
CCDC84-208ENST00000534656 FAM155AB1AL88 458 aaPredicted RBP17.94■□□□□ 0.46
CCDC84-208ENST00000534656 C8orf58Q8NAV2 365 aa17.94■□□□□ 0.46
CCDC84-208ENST00000534656 METTL22Q9BUU2 404 aaPredicted RBP17.94■□□□□ 0.46
CCDC84-208ENST00000534656 MCOLN1Q9GZU1 580 aa17.94■□□□□ 0.46
CCDC84-208ENST00000534656 DDX58O95786 925 aaKnown RBP17.93■□□□□ 0.46
CCDC84-208ENST00000534656 RGS19P49795 217 aa17.93■□□□□ 0.46
CCDC84-208ENST00000534656 CCDC30Q5VVM6 783 aa17.93■□□□□ 0.46
CCDC84-208ENST00000534656 AGBL3Q8NEM8 1001 aa17.93■□□□□ 0.46
CCDC84-208ENST00000534656 JARID2Q92833 1246 aaPredicted RBP17.93■□□□□ 0.46
CCDC84-208ENST00000534656 CCDC102AQ96A19 550 aa17.93■□□□□ 0.46
CCDC84-208ENST00000534656 CHMP4AQ9BY43 222 aa17.93■□□□□ 0.46
CCDC84-208ENST00000534656 GGA3Q9NZ52 723 aa17.93■□□□□ 0.46
CCDC84-208ENST00000534656 ZNF280AP59817 542 aaPredicted RBP17.92■□□□□ 0.46
CCDC84-208ENST00000534656 RSBN1LQ6PCB5 846 aaPredicted RBP17.92■□□□□ 0.46
CCDC84-208ENST00000534656 ANKRD18AQ8IVF6 992 aa17.92■□□□□ 0.46
CCDC84-208ENST00000534656 SULF1Q8IWU6 871 aa17.92■□□□□ 0.46
CCDC84-208ENST00000534656 CCDC85AQ96PX6 553 aaPredicted RBP17.92■□□□□ 0.46
CCDC84-208ENST00000534656 SCN9AQ15858 1988 aa17.91■□□□□ 0.46
CCDC84-208ENST00000534656 ZNF609O15014 1411 aa17.91■□□□□ 0.46
CCDC84-208ENST00000534656 ZNF157P51786 506 aaPredicted RBP17.91■□□□□ 0.46
CCDC84-208ENST00000534656 ASTN2O75129 1339 aaPredicted RBP17.91■□□□□ 0.46
CCDC84-208ENST00000534656 XDHP47989 1333 aa17.91■□□□□ 0.46
CCDC84-208ENST00000534656 ATP2B4P23634 1241 aa17.9■□□□□ 0.46
CCDC84-208ENST00000534656 KIF23Q02241 960 aaPredicted RBP17.9■□□□□ 0.46
CCDC84-208ENST00000534656 MLLT1Q03111 559 aaPredicted RBP17.9■□□□□ 0.46
CCDC84-208ENST00000534656 DGKZQ13574 1117 aa17.9■□□□□ 0.46
CCDC84-208ENST00000534656 SCARF1Q14162 830 aa17.9■□□□□ 0.46
CCDC84-208ENST00000534656 GMLQ99445 158 aa17.9■□□□□ 0.46
CCDC84-208ENST00000534656 MAP3K2Q9Y2U5 619 aa17.9■□□□□ 0.46
CCDC84-208ENST00000534656 POLR2AP24928 1970 aaKnown RBP17.9■□□□□ 0.46
CCDC84-208ENST00000534656 ANGEL2Q5VTE6 544 aaKnown RBP17.89■□□□□ 0.45
CCDC84-208ENST00000534656 PODNQ7Z5L7 613 aa17.89■□□□□ 0.45
CCDC84-208ENST00000534656 CDCA5Q96FF9 252 aa17.89■□□□□ 0.45
CCDC84-208ENST00000534656 SAGE1Q9NXZ1 904 aa17.89■□□□□ 0.45
CCDC84-208ENST00000534656 CASP8AP2Q9UKL3 1982 aa17.88■□□□□ 0.45
CCDC84-208ENST00000534656 USP17L3A6NCW0 530 aa17.88■□□□□ 0.45
CCDC84-208ENST00000534656 USP17L4A6NCW7 530 aa17.88■□□□□ 0.45
CCDC84-208ENST00000534656 IGKV5-2P06315 115 aa17.88■□□□□ 0.45
CCDC84-208ENST00000534656 SLC10A3P09131 477 aa17.88■□□□□ 0.45
CCDC84-208ENST00000534656 CTSWP56202 376 aa17.88■□□□□ 0.45
CCDC84-208ENST00000534656 KSR2Q6VAB6 950 aa17.88■□□□□ 0.45
CCDC84-208ENST00000534656 USP17L1Q7RTZ2 530 aa17.88■□□□□ 0.45
CCDC84-208ENST00000534656 TSPYL6Q8N831 410 aa17.88■□□□□ 0.45
CCDC84-208ENST00000534656 CDC5LQ99459 802 aaKnown RBP17.88■□□□□ 0.45
CCDC84-208ENST00000534656 PI4KAP2A4QPH2 592 aa17.87■□□□□ 0.45
CCDC84-208ENST00000534656 USP17L8P0C7I0 530 aa17.87■□□□□ 0.45
CCDC84-208ENST00000534656 PI4KAP1Q8N8J0 262 aa17.87■□□□□ 0.45
CCDC84-208ENST00000534656 TTLL11Q8NHH1 800 aa17.87■□□□□ 0.45
CCDC84-208ENST00000534656 MYOZ2Q9NPC6 264 aa17.87■□□□□ 0.45
CCDC84-208ENST00000534656 BSDC1Q9NW68 430 aaPredicted RBP17.87■□□□□ 0.45
CCDC84-208ENST00000534656 WTIPA6NIX2 430 aaPredicted RBP17.86■□□□□ 0.45
CCDC84-208ENST00000534656 CSRNP1Q96S65 589 aa17.86■□□□□ 0.45
CCDC84-208ENST00000534656 RNF186Q9NXI6 227 aa17.86■□□□□ 0.45
CCDC84-208ENST00000534656 MINPP1Q9UNW1 487 aa17.86■□□□□ 0.45
CCDC84-208ENST00000534656 PITPNM2Q9BZ72 1349 aa17.86■□□□□ 0.45
CCDC84-208ENST00000534656 TRPA1O75762 1119 aa17.85■□□□□ 0.45
CCDC84-208ENST00000534656 FKBP1BP68106 108 aa17.85■□□□□ 0.45
CCDC84-208ENST00000534656 NEXNQ0ZGT2 675 aa17.85■□□□□ 0.45
CCDC84-208ENST00000534656 PSME4Q14997 1843 aa17.85■□□□□ 0.45
CCDC84-208ENST00000534656 GREM2Q9H772 168 aa17.85■□□□□ 0.45
CCDC84-208ENST00000534656 MED23Q9ULK4 1368 aa17.85■□□□□ 0.45
CCDC84-208ENST00000534656 CWF19L2Q2TBE0 894 aaKnown RBP17.84■□□□□ 0.45
CCDC84-208ENST00000534656 REM2Q8IYK8 340 aaPredicted RBP17.84■□□□□ 0.45
CCDC84-208ENST00000534656 TSR2Q969E8 191 aaKnown RBP17.84■□□□□ 0.45
CCDC84-208ENST00000534656 STK31Q9BXU1 1019 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms