RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 ANKRD13DQ6ZTN6 518 aa20.74■□□□□ 0.91
RPS3-220ENST00000534555 PLBD2Q8NHP8 589 aa20.74■□□□□ 0.91
RPS3-220ENST00000534555 SAGE1Q9NXZ1 904 aa20.74■□□□□ 0.91
RPS3-220ENST00000534555 TBC1D16Q8TBP0 767 aa20.73■□□□□ 0.91
RPS3-220ENST00000534555 EYA3Q99504 573 aa20.73■□□□□ 0.91
RPS3-220ENST00000534555 CHL1O00533 1208 aa20.72■□□□□ 0.91
RPS3-220ENST00000534555 SLC10A3P09131 477 aa20.72■□□□□ 0.91
RPS3-220ENST00000534555 LMOD3Q0VAK6 560 aa20.72■□□□□ 0.91
RPS3-220ENST00000534555 CSRNP1Q96S65 589 aa20.72■□□□□ 0.91
RPS3-220ENST00000534555 GGA3Q9NZ52 723 aa20.72■□□□□ 0.91
RPS3-220ENST00000534555 VIL1P09327 827 aaKnown RBP20.71■□□□□ 0.91
RPS3-220ENST00000534555 HDGFL1Q5TGJ6 251 aa20.71■□□□□ 0.91
RPS3-220ENST00000534555 CCDC146Q8IYE0 955 aa20.71■□□□□ 0.91
RPS3-220ENST00000534555 CDCA5Q96FF9 252 aa20.71■□□□□ 0.91
RPS3-220ENST00000534555 SCN9AQ15858 1988 aa20.71■□□□□ 0.91
RPS3-220ENST00000534555 IRS4O14654 1257 aaPredicted RBP20.7■□□□□ 0.9
RPS3-220ENST00000534555 RPS8P62241 208 aaKnown RBP20.7■□□□□ 0.9
RPS3-220ENST00000534555 SULF1Q8IWU6 871 aa20.7■□□□□ 0.9
RPS3-220ENST00000534555 ZC3H12CQ9C0D7 883 aaKnown RBP20.7■□□□□ 0.9
RPS3-220ENST00000534555 SEC31BQ9NQW1 1179 aa20.7■□□□□ 0.9
RPS3-220ENST00000534555 AKAP11Q9UKA4 1901 aa20.69■□□□□ 0.9
RPS3-220ENST00000534555 PCDH10Q9P2E7 1040 aa20.68■□□□□ 0.9
RPS3-220ENST00000534555 TRIM35Q9UPQ4 493 aa20.68■□□□□ 0.9
RPS3-220ENST00000534555 G3V3G9 751 aa20.67■□□□□ 0.9
RPS3-220ENST00000534555 UFL1O94874 794 aa20.67■□□□□ 0.9
RPS3-220ENST00000534555 SCARF1Q14162 830 aa20.67■□□□□ 0.9
RPS3-220ENST00000534555 DCAF8Q5TAQ9 597 aa20.67■□□□□ 0.9
RPS3-220ENST00000534555 ANGEL2Q5VTE6 544 aaKnown RBP20.67■□□□□ 0.9
RPS3-220ENST00000534555 RASAL3Q86YV0 1011 aa20.67■□□□□ 0.9
RPS3-220ENST00000534555 DBF4Q9UBU7 674 aaPredicted RBP20.67■□□□□ 0.9
RPS3-220ENST00000534555 SCAF8Q9UPN6 1271 aaKnown RBP20.67■□□□□ 0.9
RPS3-220ENST00000534555 PODXL2Q9NZ53 605 aa20.66■□□□□ 0.9
RPS3-220ENST00000534555 ANKIB1Q9P2G1 1089 aa20.66■□□□□ 0.9
RPS3-220ENST00000534555 ZNF280AP59817 542 aaPredicted RBP20.65■□□□□ 0.9
RPS3-220ENST00000534555 TRIM28Q13263 835 aaKnown RBP20.65■□□□□ 0.9
RPS3-220ENST00000534555 RSBN1LQ6PCB5 846 aaPredicted RBP20.65■□□□□ 0.9
RPS3-220ENST00000534555 MOB2Q70IA6 237 aa20.65■□□□□ 0.9
RPS3-220ENST00000534555 CTU1Q7Z7A3 348 aaKnown RBP20.65■□□□□ 0.9
RPS3-220ENST00000534555 TNRC18O15417 2968 aaPredicted RBP20.65■□□□□ 0.9
RPS3-220ENST00000534555 JARID2Q92833 1246 aaPredicted RBP20.64■□□□□ 0.89
RPS3-220ENST00000534555 CCDC85AQ96PX6 553 aaPredicted RBP20.64■□□□□ 0.89
RPS3-220ENST00000534555 HYPKQ9NX55 129 aa20.64■□□□□ 0.89
RPS3-220ENST00000534555 GGA1Q9UJY5 639 aa20.64■□□□□ 0.89
RPS3-220ENST00000534555 HOXB7P09629 217 aa20.63■□□□□ 0.89
RPS3-220ENST00000534555 DUSP27Q5VZP5 1158 aa20.63■□□□□ 0.89
RPS3-220ENST00000534555 RIC3Q7Z5B4 369 aa20.63■□□□□ 0.89
RPS3-220ENST00000534555 ZBTB38Q8NAP3 1195 aaPredicted RBP20.63■□□□□ 0.89
RPS3-220ENST00000534555 PRAMEF18Q5VWM3 479 aa20.62■□□□□ 0.89
RPS3-220ENST00000534555 AGBL3Q8NEM8 1001 aa20.62■□□□□ 0.89
RPS3-220ENST00000534555 GMLQ99445 158 aa20.62■□□□□ 0.89
RPS3-220ENST00000534555 PHAXQ9H814 394 aaKnown RBP20.62■□□□□ 0.89
RPS3-220ENST00000534555 MYD88Q99836 296 aa20.61■□□□□ 0.89
RPS3-220ENST00000534555 MYOZ2Q9NPC6 264 aa20.61■□□□□ 0.89
RPS3-220ENST00000534555 HPS5Q9UPZ3 1129 aa20.61■□□□□ 0.89
RPS3-220ENST00000534555 WTIPA6NIX2 430 aaPredicted RBP20.6■□□□□ 0.89
RPS3-220ENST00000534555 UBE2Q2LH0YL09 131 aa20.6■□□□□ 0.89
RPS3-220ENST00000534555 TBC1D8O95759 1140 aa20.6■□□□□ 0.89
RPS3-220ENST00000534555 USP17L8P0C7I0 530 aa20.6■□□□□ 0.89
RPS3-220ENST00000534555 RALBP1Q15311 655 aa20.6■□□□□ 0.89
RPS3-220ENST00000534555 REM2Q8IYK8 340 aaPredicted RBP20.6■□□□□ 0.89
RPS3-220ENST00000534555 RUNDC1Q96C34 613 aa20.6■□□□□ 0.89
RPS3-220ENST00000534555 PDE4DIPQ5VU43 2346 aa20.59■□□□□ 0.89
RPS3-220ENST00000534555 FKBP1BP68106 108 aa20.59■□□□□ 0.89
RPS3-220ENST00000534555 MBIPQ9NS73 344 aa20.59■□□□□ 0.89
RPS3-220ENST00000534555 PAPPA2Q9BXP8 1791 aa20.59■□□□□ 0.89
RPS3-220ENST00000534555 GOLGA2Q08379 1002 aa20.58■□□□□ 0.89
RPS3-220ENST00000534555 CCDC152Q4G0S7 254 aa20.58■□□□□ 0.89
RPS3-220ENST00000534555 ZNF296Q8WUU4 475 aaPredicted RBP20.58■□□□□ 0.89
RPS3-220ENST00000534555 MXD3Q9BW11 206 aa20.58■□□□□ 0.89
RPS3-220ENST00000534555 HDAC9Q9UKV0 1011 aa20.58■□□□□ 0.89
RPS3-220ENST00000534555 ZNF609O15014 1411 aa20.58■□□□□ 0.88
RPS3-220ENST00000534555 PSME4Q14997 1843 aa20.57■□□□□ 0.88
RPS3-220ENST00000534555 USP17L3A6NCW0 530 aa20.57■□□□□ 0.88
RPS3-220ENST00000534555 USP17L4A6NCW7 530 aa20.57■□□□□ 0.88
RPS3-220ENST00000534555 PDE8AO60658 829 aa20.57■□□□□ 0.88
RPS3-220ENST00000534555 NBPF9Q3BBW0 867 aa20.57■□□□□ 0.88
RPS3-220ENST00000534555 USP17L1Q7RTZ2 530 aa20.57■□□□□ 0.88
RPS3-220ENST00000534555 XDHP47989 1333 aa20.56■□□□□ 0.88
RPS3-220ENST00000534555 PITPNM2Q9BZ72 1349 aa20.56■□□□□ 0.88
RPS3-220ENST00000534555 ELL2O00472 640 aaPredicted RBP20.56■□□□□ 0.88
RPS3-220ENST00000534555 PCCAP05165 728 aaPredicted RBP20.56■□□□□ 0.88
RPS3-220ENST00000534555 ATP2B4P23634 1241 aa20.56■□□□□ 0.88
RPS3-220ENST00000534555 MKRN3Q13064 507 aaKnown RBP20.56■□□□□ 0.88
RPS3-220ENST00000534555 PRPF38BQ5VTL8 546 aaKnown RBP20.56■□□□□ 0.88
RPS3-220ENST00000534555 ANKRD18AQ8IVF6 992 aa20.56■□□□□ 0.88
RPS3-220ENST00000534555 TTLL12Q14166 644 aaPredicted RBP20.55■□□□□ 0.88
RPS3-220ENST00000534555 PODNQ7Z5L7 613 aa20.55■□□□□ 0.88
RPS3-220ENST00000534555 CCDC191Q8NCU4 936 aa20.55■□□□□ 0.88
RPS3-220ENST00000534555 ADAMTS8Q9UP79 889 aa20.55■□□□□ 0.88
RPS3-220ENST00000534555 HSP90B1P14625 803 aaKnown RBP20.54■□□□□ 0.88
RPS3-220ENST00000534555 CWC25Q9NXE8 425 aaPredicted RBP20.54■□□□□ 0.88
RPS3-220ENST00000534555 TM4SF4P48230 202 aa20.53■□□□□ 0.88
RPS3-220ENST00000534555 WDR43Q15061 677 aaKnown RBP eCLIP20.53■□□□□ 0.88
RPS3-220ENST00000534555 PKN2Q16513 984 aaKnown RBP20.53■□□□□ 0.88
RPS3-220ENST00000534555 FBXW7Q969H0 707 aa20.53■□□□□ 0.88
RPS3-220ENST00000534555 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
RPS3-220ENST00000534555 GPR25O00155 361 aa20.52■□□□□ 0.88
RPS3-220ENST00000534555 ZNF853P0CG23 659 aa20.52■□□□□ 0.88
RPS3-220ENST00000534555 R3HDMLQ9H3Y0 253 aa20.52■□□□□ 0.88
RPS3-220ENST00000534555 WNT10BO00744 389 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms