RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	DDX19A	Q9NUU7	478 aa	Known RBP	18.07	■□□□□ 0.48
NCAPD3-213	ENST00000534532	USP8	P40818	1118 aa		18.07	■□□□□ 0.48
NCAPD3-213	ENST00000534532	KAT6B	Q8WYB5	2073 aa		18.07	■□□□□ 0.48
NCAPD3-213	ENST00000534532	STX6	O43752	255 aa		18.07	■□□□□ 0.48
NCAPD3-213	ENST00000534532	PRIM1	P49642	420 aa	Known RBP	18.07	■□□□□ 0.48
NCAPD3-213	ENST00000534532	LARP6	Q9BRS8	491 aa	Known RBP	18.07	■□□□□ 0.48
NCAPD3-213	ENST00000534532	RNF113A	O15541	343 aa	Known RBP	18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	TOP1	P11387	765 aa	Known RBP	18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	PRKCSH	P14314	528 aa	Predicted RBP	18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	HDAC1	Q13547	482 aa	Predicted RBP	18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	HOOK2	Q96ED9	719 aa		18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	GGA1	Q9UJY5	639 aa		18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	PLBD2	Q8NHP8	589 aa		18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	BABAM1	Q9NWV8	329 aa		18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532		A0A1W2PP64	1363 aa		18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	MAST3	O60307	1309 aa		18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	PDE1A	P54750	535 aa		18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	CCDC102B	Q68D86	513 aa		18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	TAX1BP1	Q86VP1	789 aa		18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	MAGEB6	Q8N7X4	407 aa		18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	RRP36	Q96EU6	259 aa	Known RBP	18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	PA2G4	Q9UQ80	394 aa	Known RBP	18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	SBNO1	A3KN83	1393 aa		18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	USO1	O60763	962 aa	Known RBP	18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	YEATS4	O95619	227 aa		18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	MAP3K9	P80192	1104 aa		18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	LARGE2	Q8N3Y3	721 aa		18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	18.06	■□□□□ 0.48
NCAPD3-213	ENST00000534532	RTL9	Q8NET4	1388 aa		18.05	■□□□□ 0.48
NCAPD3-213	ENST00000534532	TTC41P	Q6P2S7	1318 aa		18.05	■□□□□ 0.48
NCAPD3-213	ENST00000534532	BEGAIN	Q9BUH8	593 aa		18.05	■□□□□ 0.48
NCAPD3-213	ENST00000534532	ZSCAN12	O43309	604 aa		18.05	■□□□□ 0.48
NCAPD3-213	ENST00000534532	ALG1	Q9BT22	464 aa		18.05	■□□□□ 0.48
NCAPD3-213	ENST00000534532	PICK1	Q9NRD5	415 aa		18.05	■□□□□ 0.48
NCAPD3-213	ENST00000534532		H0YHG0	523 aa		18.05	■□□□□ 0.48
NCAPD3-213	ENST00000534532	PRC1	O43663	620 aa		18.05	■□□□□ 0.48
NCAPD3-213	ENST00000534532	MPND	Q8N594	471 aa		18.05	■□□□□ 0.48
NCAPD3-213	ENST00000534532	CENPH	Q9H3R5	247 aa		18.05	■□□□□ 0.48
NCAPD3-213	ENST00000534532	GRPEL1	Q9HAV7	217 aa		18.05	■□□□□ 0.48
NCAPD3-213	ENST00000534532	SYCE3	A1L190	88 aa		18.05	■□□□□ 0.48
NCAPD3-213	ENST00000534532	PANK2	Q9BZ23	570 aa		18.05	■□□□□ 0.48
NCAPD3-213	ENST00000534532	SHANK2	Q9UPX8	1470 aa		18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	CALML3	P27482	149 aa		18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	NUP88	Q99567	741 aa	Predicted RBP	18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	EXOC1	Q9NV70	894 aa		18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	RMND1	Q9NWS8	449 aa		18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	RBM8A	Q9Y5S9	174 aa	Known RBP	18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	MIGA1	Q8NAN2	632 aa		18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	EIF2AK4	Q9P2K8	1649 aa	Known RBP	18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	DPP8	Q6V1X1	898 aa	Predicted RBP	18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	PUF60	Q9UHX1	559 aa	Known RBP	18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	CTNNA2	P26232	953 aa		18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	HIBADH	P31937	336 aa	Known RBP	18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	MTERF4	Q7Z6M4	381 aa	Known RBP	18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	TFIP11	Q9UBB9	837 aa	Known RBP	18.04	■□□□□ 0.48
NCAPD3-213	ENST00000534532	EIF3J	O75822	258 aa	Known RBP	18.03	■□□□□ 0.48
NCAPD3-213	ENST00000534532	NUCB1	Q02818	461 aa		18.03	■□□□□ 0.48
NCAPD3-213	ENST00000534532	TEX11	Q8IYF3	940 aa		18.03	■□□□□ 0.48
NCAPD3-213	ENST00000534532	FLAD1	Q8NFF5	587 aa		18.03	■□□□□ 0.48
NCAPD3-213	ENST00000534532	FAM89A	Q96GI7	184 aa		18.03	■□□□□ 0.48
NCAPD3-213	ENST00000534532	PDE8A	O60658	829 aa		18.03	■□□□□ 0.48
NCAPD3-213	ENST00000534532	TMOD4	Q9NZQ9	345 aa		18.03	■□□□□ 0.48
NCAPD3-213	ENST00000534532	SDS	P20132	328 aa		18.02	■□□□□ 0.48
NCAPD3-213	ENST00000534532	TFCP2	Q12800	502 aa		18.02	■□□□□ 0.48
NCAPD3-213	ENST00000534532	FERMT1	Q9BQL6	677 aa		18.02	■□□□□ 0.48
NCAPD3-213	ENST00000534532	MACROD2	A1Z1Q3	448 aa		18.02	■□□□□ 0.48
NCAPD3-213	ENST00000534532	TCHP	Q9BT92	498 aa		18.02	■□□□□ 0.48
NCAPD3-213	ENST00000534532	CCDC172	P0C7W6	258 aa		18.02	■□□□□ 0.48
NCAPD3-213	ENST00000534532	ZNF408	Q9H9D4	720 aa		18.02	■□□□□ 0.48
NCAPD3-213	ENST00000534532	HOXB7	P09629	217 aa		18.02	■□□□□ 0.47
NCAPD3-213	ENST00000534532	CWC15	Q9P013	229 aa	Known RBP	18.02	■□□□□ 0.47
NCAPD3-213	ENST00000534532	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	18.01	■□□□□ 0.47
NCAPD3-213	ENST00000534532	TSPYL1	Q9H0U9	437 aa		18.01	■□□□□ 0.47
NCAPD3-213	ENST00000534532	PHACTR2	O75167	634 aa		18.01	■□□□□ 0.47
NCAPD3-213	ENST00000534532	PTPRK	Q15262	1439 aa		18.01	■□□□□ 0.47
NCAPD3-213	ENST00000534532	KIF2A	O00139	706 aa	Predicted RBP	18.01	■□□□□ 0.47
NCAPD3-213	ENST00000534532	KIF5C	O60282	957 aa		18.01	■□□□□ 0.47
NCAPD3-213	ENST00000534532	HOOK3	Q86VS8	718 aa		18.01	■□□□□ 0.47
NCAPD3-213	ENST00000534532	JAG2	Q9Y219	1238 aa		18.01	■□□□□ 0.47
NCAPD3-213	ENST00000534532	EDC4	Q6P2E9	1401 aa	Known RBP	18.01	■□□□□ 0.47
NCAPD3-213	ENST00000534532	VAMP4	O75379	141 aa		18.01	■□□□□ 0.47
NCAPD3-213	ENST00000534532	KRT13	P13646	458 aa		18.01	■□□□□ 0.47
NCAPD3-213	ENST00000534532	HCLS1	P14317	486 aa	Predicted RBP	18.01	■□□□□ 0.47
NCAPD3-213	ENST00000534532	ITGA6	P23229	1130 aa		18.01	■□□□□ 0.47
NCAPD3-213	ENST00000534532	WDR62	O43379	1518 aa		18.01	■□□□□ 0.47
NCAPD3-213	ENST00000534532	GNA11	P29992	359 aa		18	■□□□□ 0.47
NCAPD3-213	ENST00000534532	CERS3	Q8IU89	383 aa		18	■□□□□ 0.47
NCAPD3-213	ENST00000534532	SLC52A2	Q9HAB3	445 aa		18	■□□□□ 0.47
NCAPD3-213	ENST00000534532	PPFIA3	O75145	1194 aa		18	■□□□□ 0.47
NCAPD3-213	ENST00000534532	PHACTR3	Q96KR7	559 aa		18	■□□□□ 0.47
NCAPD3-213	ENST00000534532	MAP7D2	Q96T17	732 aa		18	■□□□□ 0.47
NCAPD3-213	ENST00000534532	ALDH1B1	P30837	517 aa		18	■□□□□ 0.47
NCAPD3-213	ENST00000534532	STAT6	P42226	847 aa		18	■□□□□ 0.47
NCAPD3-213	ENST00000534532	VSIG10	Q8N0Z9	540 aa		18	■□□□□ 0.47
NCAPD3-213	ENST00000534532	METTL22	Q9BUU2	404 aa	Predicted RBP	18	■□□□□ 0.47
NCAPD3-213	ENST00000534532	TMEM2	Q9UHN6	1383 aa		18	■□□□□ 0.47
NCAPD3-213	ENST00000534532	PUM3	Q15397	648 aa	Known RBP	18	■□□□□ 0.47
NCAPD3-213	ENST00000534532	BRDT	Q58F21	947 aa	Predicted RBP	18	■□□□□ 0.47
NCAPD3-213	ENST00000534532	LRRC2	Q9BYS8	371 aa		18	■□□□□ 0.47

Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms