RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 PNMA8AQ86V59 439 aaPredicted RBP17.97■□□□□ 0.47
SF3B2-215ENST00000534307 LINS1Q8NG48 757 aa17.97■□□□□ 0.47
SF3B2-215ENST00000534307 TTLL11Q8NHH1 800 aa17.97■□□□□ 0.47
SF3B2-215ENST00000534307 PODXL2Q9NZ53 605 aa17.97■□□□□ 0.47
SF3B2-215ENST00000534307 NSFL1CQ9UNZ2 370 aaKnown RBP17.97■□□□□ 0.47
SF3B2-215ENST00000534307 DEFB115Q30KQ5 88 aa17.96■□□□□ 0.47
SF3B2-215ENST00000534307 MAP1SQ66K74 1059 aaPredicted RBP17.96■□□□□ 0.47
SF3B2-215ENST00000534307 UBE3BQ7Z3V4 1068 aa17.96■□□□□ 0.47
SF3B2-215ENST00000534307 TBC1D16Q8TBP0 767 aa17.96■□□□□ 0.47
SF3B2-215ENST00000534307 CCDC85AQ96PX6 553 aaPredicted RBP17.96■□□□□ 0.47
SF3B2-215ENST00000534307 EPS15P42566 896 aa17.95■□□□□ 0.46
SF3B2-215ENST00000534307 RGS19P49795 217 aa17.95■□□□□ 0.46
SF3B2-215ENST00000534307 MAP2K1Q02750 393 aaPredicted RBP17.95■□□□□ 0.46
SF3B2-215ENST00000534307 MLLT1Q03111 559 aaPredicted RBP17.95■□□□□ 0.46
SF3B2-215ENST00000534307 PLA2G12BQ9BX93 195 aa17.95■□□□□ 0.46
SF3B2-215ENST00000534307 GPRC5DQ9NZD1 345 aa17.95■□□□□ 0.46
SF3B2-215ENST00000534307 PCDH10Q9P2E7 1040 aa17.95■□□□□ 0.46
SF3B2-215ENST00000534307 LMOD1P29536 600 aaPredicted RBP17.94■□□□□ 0.46
SF3B2-215ENST00000534307 WASHC4Q2M389 1173 aa17.94■□□□□ 0.46
SF3B2-215ENST00000534307 CIAPIN1Q6FI81 312 aa17.94■□□□□ 0.46
SF3B2-215ENST00000534307 CNTROBQ8N137 903 aa17.94■□□□□ 0.46
SF3B2-215ENST00000534307 GREM2Q9H772 168 aa17.94■□□□□ 0.46
SF3B2-215ENST00000534307 CLEC11AQ9Y240 323 aa17.94■□□□□ 0.46
SF3B2-215ENST00000534307 SPEF2Q9C093 1822 aa17.93■□□□□ 0.46
SF3B2-215ENST00000534307 F6X3S4 739 aa17.93■□□□□ 0.46
SF3B2-215ENST00000534307 CCER2I3L3R5 266 aa17.93■□□□□ 0.46
SF3B2-215ENST00000534307 RAD17O75943 681 aa17.93■□□□□ 0.46
SF3B2-215ENST00000534307 BEND3Q5T5X7 828 aa17.93■□□□□ 0.46
SF3B2-215ENST00000534307 ANKRD18AQ8IVF6 992 aa17.93■□□□□ 0.46
SF3B2-215ENST00000534307 SCN9AQ15858 1988 aa17.92■□□□□ 0.46
SF3B2-215ENST00000534307 CCDC85CA6NKD9 419 aa17.92■□□□□ 0.46
SF3B2-215ENST00000534307 E9PSI1 815 aa17.92■□□□□ 0.46
SF3B2-215ENST00000534307 C6orf229H3BNL8 230 aa17.92■□□□□ 0.46
SF3B2-215ENST00000534307 GMPSP49915 693 aaPredicted RBP17.92■□□□□ 0.46
SF3B2-215ENST00000534307 USP50Q70EL3 339 aaPredicted RBP17.92■□□□□ 0.46
SF3B2-215ENST00000534307 GPR101Q96P66 508 aaPredicted RBP17.92■□□□□ 0.46
SF3B2-215ENST00000534307 CDC5LQ99459 802 aaKnown RBP17.92■□□□□ 0.46
SF3B2-215ENST00000534307 EYA3Q99504 573 aa17.92■□□□□ 0.46
SF3B2-215ENST00000534307 ABT1Q9ULW3 272 aaKnown RBP17.92■□□□□ 0.46
SF3B2-215ENST00000534307 CSF1RP07333 972 aa17.91■□□□□ 0.46
SF3B2-215ENST00000534307 SLFN5Q08AF3 891 aa17.91■□□□□ 0.46
SF3B2-215ENST00000534307 TNIP1Q15025 636 aa17.91■□□□□ 0.46
SF3B2-215ENST00000534307 DBNDD1Q9H9R9 158 aa17.91■□□□□ 0.46
SF3B2-215ENST00000534307 ADARB2Q9NS39 739 aaKnown RBP17.91■□□□□ 0.46
SF3B2-215ENST00000534307 RIMBP2O15034 1052 aa17.9■□□□□ 0.46
SF3B2-215ENST00000534307 UFL1O94874 794 aa17.9■□□□□ 0.46
SF3B2-215ENST00000534307 BSDC1Q9NW68 430 aaPredicted RBP17.9■□□□□ 0.46
SF3B2-215ENST00000534307 ANKIB1Q9P2G1 1089 aa17.9■□□□□ 0.46
SF3B2-215ENST00000534307 GGA1Q9UJY5 639 aa17.9■□□□□ 0.46
SF3B2-215ENST00000534307 XDHP47989 1333 aa17.9■□□□□ 0.46
SF3B2-215ENST00000534307 PSME4Q14997 1843 aa17.89■□□□□ 0.45
SF3B2-215ENST00000534307 PSMD14O00487 310 aa17.89■□□□□ 0.45
SF3B2-215ENST00000534307 ECE2O60344 883 aa17.89■□□□□ 0.45
SF3B2-215ENST00000534307 FMR1Q06787 632 aaKnown RBP eCLIP17.89■□□□□ 0.453e-6■■□□□ 12.5
SF3B2-215ENST00000534307 CAPNS2Q96L46 248 aa17.89■□□□□ 0.45
SF3B2-215ENST00000534307 KCNQ5Q9NR82 932 aa17.89■□□□□ 0.45
SF3B2-215ENST00000534307 MINPP1Q9UNW1 487 aa17.89■□□□□ 0.45
SF3B2-215ENST00000534307 FOXO4P98177 505 aa17.88■□□□□ 0.45
SF3B2-215ENST00000534307 DOK7Q18PE1 504 aa17.88■□□□□ 0.45
SF3B2-215ENST00000534307 TRMT2AQ8IZ69 625 aaKnown RBP17.88■□□□□ 0.45
SF3B2-215ENST00000534307 ZC3H12CQ9C0D7 883 aaKnown RBP17.88■□□□□ 0.45
SF3B2-215ENST00000534307 SHTN1A0MZ66 631 aa17.87■□□□□ 0.45
SF3B2-215ENST00000534307 WTIPA6NIX2 430 aaPredicted RBP17.87■□□□□ 0.45
SF3B2-215ENST00000534307 ITGA6P23229 1130 aa17.87■□□□□ 0.45
SF3B2-215ENST00000534307 CYP4F22Q6NT55 531 aa17.87■□□□□ 0.45
SF3B2-215ENST00000534307 MRPL50Q8N5N7 158 aaKnown RBP17.87■□□□□ 0.45
SF3B2-215ENST00000534307 DPF2Q92785 391 aa17.87■□□□□ 0.45
SF3B2-215ENST00000534307 CDCA7LQ96GN5 454 aa17.87■□□□□ 0.45
SF3B2-215ENST00000534307 TSKSQ9UJT2 592 aa17.87■□□□□ 0.45
SF3B2-215ENST00000534307 ZBTB12Q9Y330 459 aaPredicted RBP17.87■□□□□ 0.45
SF3B2-215ENST00000534307 ZNF609O15014 1411 aa17.87■□□□□ 0.45
SF3B2-215ENST00000534307 GRM8O00222 908 aa17.86■□□□□ 0.45
SF3B2-215ENST00000534307 ATP2B4P23634 1241 aa17.86■□□□□ 0.45
SF3B2-215ENST00000534307 HIRAP54198 1017 aaPredicted RBP17.86■□□□□ 0.45
SF3B2-215ENST00000534307 BCL2L13Q9BXK5 485 aa17.86■□□□□ 0.45
SF3B2-215ENST00000534307 PGAP2Q9UHJ9 254 aa17.86■□□□□ 0.45
SF3B2-215ENST00000534307 CNOT7Q9UIV1 285 aaKnown RBP17.86■□□□□ 0.45
SF3B2-215ENST00000534307 ZNF646O15015 1829 aaPredicted RBP17.86■□□□□ 0.45
SF3B2-215ENST00000534307 ALDH1L1O75891 902 aa17.85■□□□□ 0.45
SF3B2-215ENST00000534307 VIL1P09327 827 aaKnown RBP17.85■□□□□ 0.45
SF3B2-215ENST00000534307 RPS12P25398 132 aaKnown RBP17.85■□□□□ 0.45
SF3B2-215ENST00000534307 MICALL2Q8IY33 904 aa17.85■□□□□ 0.45
SF3B2-215ENST00000534307 TRPM4Q8TD43 1214 aa17.85■□□□□ 0.45
SF3B2-215ENST00000534307 SSH1Q8WYL5 1049 aa17.85■□□□□ 0.45
SF3B2-215ENST00000534307 MED23Q9ULK4 1368 aa17.85■□□□□ 0.45
SF3B2-215ENST00000534307 A0A1B0GUL6 1792 aa17.84■□□□□ 0.45
SF3B2-215ENST00000534307 IGHMBP2P38935 993 aaKnown RBP17.84■□□□□ 0.45
SF3B2-215ENST00000534307 GRM1Q13255 1194 aa17.84■□□□□ 0.45
SF3B2-215ENST00000534307 EPHA10Q5JZY3 1008 aa17.84■□□□□ 0.45
SF3B2-215ENST00000534307 PAXIP1Q6ZW49 1069 aaPredicted RBP17.84■□□□□ 0.45
SF3B2-215ENST00000534307 ZC3H15Q8WU90 426 aaKnown RBP17.84■□□□□ 0.45
SF3B2-215ENST00000534307 BEGAINQ9BUH8 593 aa17.84■□□□□ 0.45
SF3B2-215ENST00000534307 ECE1P42892 770 aa17.83■□□□□ 0.44
SF3B2-215ENST00000534307 CCT4P50991 539 aaKnown RBP17.83■□□□□ 0.44
SF3B2-215ENST00000534307 SRCIN1Q9C0H9 1055 aa17.83■□□□□ 0.44
SF3B2-215ENST00000534307 UTYO14607 1347 aa17.82■□□□□ 0.44
SF3B2-215ENST00000534307 PTPRCP08575 1304 aa17.82■□□□□ 0.44
SF3B2-215ENST00000534307 TRAF5O00463 557 aa17.82■□□□□ 0.44
SF3B2-215ENST00000534307 AOC2O75106 756 aa17.82■□□□□ 0.44
SF3B2-215ENST00000534307 EGFRP00533 1210 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms