RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 TBC1D10BQ4KMP7 808 aaPredicted RBP23.39■■□□□ 1.33
UBXN1-216ENST00000533908 HHIPL1Q96JK4 782 aa23.39■■□□□ 1.33
UBXN1-216ENST00000533908 ZIC5Q96T25 663 aa23.39■■□□□ 1.33
UBXN1-216ENST00000533908 GNAI1P63096 354 aa23.38■■□□□ 1.33
UBXN1-216ENST00000533908 BEGAINQ9BUH8 593 aa23.38■■□□□ 1.33
UBXN1-216ENST00000533908 GOLGA2Q08379 1002 aa23.37■■□□□ 1.33
UBXN1-216ENST00000533908 RBM26Q5T8P6 1007 aaKnown RBP23.37■■□□□ 1.33
UBXN1-216ENST00000533908 PODXL2Q9NZ53 605 aa23.37■■□□□ 1.33
UBXN1-216ENST00000533908 TSPYL6Q8N831 410 aa23.36■■□□□ 1.33
UBXN1-216ENST00000533908 CCDC191Q8NCU4 936 aa23.36■■□□□ 1.33
UBXN1-216ENST00000533908 EYA3Q99504 573 aa23.36■■□□□ 1.33
UBXN1-216ENST00000533908 POLR2AP24928 1970 aaKnown RBP23.35■■□□□ 1.33
UBXN1-216ENST00000533908 SCN9AQ15858 1988 aa23.35■■□□□ 1.33
UBXN1-216ENST00000533908 PCCAP05165 728 aaPredicted RBP23.35■■□□□ 1.33
UBXN1-216ENST00000533908 CCDC85AQ96PX6 553 aaPredicted RBP23.35■■□□□ 1.33
UBXN1-216ENST00000533908 VIL1P09327 827 aaKnown RBP23.34■■□□□ 1.33
UBXN1-216ENST00000533908 RPS12P25398 132 aaKnown RBP23.34■■□□□ 1.33
UBXN1-216ENST00000533908 METTL22Q9BUU2 404 aaPredicted RBP23.34■■□□□ 1.33
UBXN1-216ENST00000533908 ZC3H12CQ9C0D7 883 aaKnown RBP23.34■■□□□ 1.33
UBXN1-216ENST00000533908 WTIPA6NIX2 430 aaPredicted RBP23.33■■□□□ 1.33
UBXN1-216ENST00000533908 ADM5C9JUS6 153 aa23.33■■□□□ 1.33
UBXN1-216ENST00000533908 PDE8AO60658 829 aa23.33■■□□□ 1.33
UBXN1-216ENST00000533908 UFL1O94874 794 aa23.33■■□□□ 1.33
UBXN1-216ENST00000533908 KRT26Q7Z3Y9 468 aa23.33■■□□□ 1.33
UBXN1-216ENST00000533908 CWC25Q9NXE8 425 aaPredicted RBP23.33■■□□□ 1.33
UBXN1-216ENST00000533908 ASTN2O75129 1339 aaPredicted RBP23.33■■□□□ 1.32
UBXN1-216ENST00000533908 BRPF1P55201 1214 aaPredicted RBP23.32■■□□□ 1.32
UBXN1-216ENST00000533908 HUNKP57058 714 aa23.32■■□□□ 1.32
UBXN1-216ENST00000533908 CALD1Q05682 793 aaKnown RBP23.32■■□□□ 1.32
UBXN1-216ENST00000533908 CCDC184Q52MB2 194 aa23.32■■□□□ 1.32
UBXN1-216ENST00000533908 ANKIB1Q9P2G1 1089 aa23.32■■□□□ 1.32
UBXN1-216ENST00000533908 CCDC152Q4G0S7 254 aa23.31■■□□□ 1.32
UBXN1-216ENST00000533908 GGA1Q9UJY5 639 aa23.31■■□□□ 1.32
UBXN1-216ENST00000533908 MAP3K2Q9Y2U5 619 aa23.31■■□□□ 1.32
UBXN1-216ENST00000533908 IGKV5-2P06315 115 aa23.3■■□□□ 1.32
UBXN1-216ENST00000533908 CCDC30Q5VVM6 783 aa23.3■■□□□ 1.32
UBXN1-216ENST00000533908 DCPSQ96C86 337 aaKnown RBP23.3■■□□□ 1.32
UBXN1-216ENST00000533908 FAM155AB1AL88 458 aaPredicted RBP23.29■■□□□ 1.32
UBXN1-216ENST00000533908 KIF4BQ2VIQ3 1234 aa23.29■■□□□ 1.32
UBXN1-216ENST00000533908 HSP90B1P14625 803 aaKnown RBP23.28■■□□□ 1.32
UBXN1-216ENST00000533908 TSR2Q969E8 191 aaKnown RBP23.28■■□□□ 1.32
UBXN1-216ENST00000533908 GBA2Q9HCG7 927 aaPredicted RBP23.28■■□□□ 1.32
UBXN1-216ENST00000533908 PI4KAP2A4QPH2 592 aa23.27■■□□□ 1.32
UBXN1-216ENST00000533908 CA12O43570 354 aa23.27■■□□□ 1.32
UBXN1-216ENST00000533908 ZNF280AP59817 542 aaPredicted RBP23.27■■□□□ 1.32
UBXN1-216ENST00000533908 NOGQ13253 232 aa23.27■■□□□ 1.32
UBXN1-216ENST00000533908 RGMBQ6NW40 437 aa23.27■■□□□ 1.32
UBXN1-216ENST00000533908 KSR2Q6VAB6 950 aa23.27■■□□□ 1.32
UBXN1-216ENST00000533908 PI4KAP1Q8N8J0 262 aa23.27■■□□□ 1.32
UBXN1-216ENST00000533908 GMLQ99445 158 aa23.27■■□□□ 1.32
UBXN1-216ENST00000533908 CASP8AP2Q9UKL3 1982 aa23.27■■□□□ 1.32
UBXN1-216ENST00000533908 G3V3G9 751 aa23.26■■□□□ 1.31
UBXN1-216ENST00000533908 DDX58O95786 925 aaKnown RBP23.26■■□□□ 1.31
UBXN1-216ENST00000533908 DCAF8Q5TAQ9 597 aa23.26■■□□□ 1.31
UBXN1-216ENST00000533908 RSBN1LQ6PCB5 846 aaPredicted RBP23.26■■□□□ 1.31
UBXN1-216ENST00000533908 G2E3Q7L622 706 aa23.26■■□□□ 1.31
UBXN1-216ENST00000533908 ANKRD18AQ8IVF6 992 aa23.26■■□□□ 1.31
UBXN1-216ENST00000533908 TTLL11Q8NHH1 800 aa23.26■■□□□ 1.31
UBXN1-216ENST00000533908 GGA3Q9NZ52 723 aa23.26■■□□□ 1.31
UBXN1-216ENST00000533908 CCDC85CA6NKD9 419 aa23.25■■□□□ 1.31
UBXN1-216ENST00000533908 C2orf69Q8N8R5 385 aa23.25■■□□□ 1.31
UBXN1-216ENST00000533908 XDHP47989 1333 aa23.25■■□□□ 1.31
UBXN1-216ENST00000533908 CTSWP56202 376 aa23.24■■□□□ 1.31
UBXN1-216ENST00000533908 SCARF1Q14162 830 aa23.24■■□□□ 1.31
UBXN1-216ENST00000533908 CWF19L2Q2TBE0 894 aaKnown RBP23.24■■□□□ 1.31
UBXN1-216ENST00000533908 AGBL3Q8NEM8 1001 aa23.24■■□□□ 1.31
UBXN1-216ENST00000533908 MCOLN1Q9GZU1 580 aa23.24■■□□□ 1.31
UBXN1-216ENST00000533908 GREM2Q9H772 168 aa23.24■■□□□ 1.31
UBXN1-216ENST00000533908 ATP2B4P23634 1241 aa23.23■■□□□ 1.31
UBXN1-216ENST00000533908 KIF23Q02241 960 aaPredicted RBP23.23■■□□□ 1.31
UBXN1-216ENST00000533908 SULF1Q8IWU6 871 aa23.23■■□□□ 1.31
UBXN1-216ENST00000533908 CDCA5Q96FF9 252 aa23.23■■□□□ 1.31
UBXN1-216ENST00000533908 MINPP1Q9UNW1 487 aa23.23■■□□□ 1.31
UBXN1-216ENST00000533908 ZNF157P51786 506 aaPredicted RBP23.22■■□□□ 1.31
UBXN1-216ENST00000533908 ANGEL2Q5VTE6 544 aaKnown RBP23.22■■□□□ 1.31
UBXN1-216ENST00000533908 ZNF609O15014 1411 aa23.22■■□□□ 1.31
UBXN1-216ENST00000533908 NEURL1BA8MQ27 555 aa23.21■■□□□ 1.31
UBXN1-216ENST00000533908 H7C1W4 665 aa23.21■■□□□ 1.31
UBXN1-216ENST00000533908 FAM161AQ3B820 660 aa23.21■■□□□ 1.31
UBXN1-216ENST00000533908 WWC1Q8IX03 1113 aa23.21■■□□□ 1.31
UBXN1-216ENST00000533908 CCDC102AQ96A19 550 aa23.21■■□□□ 1.31
UBXN1-216ENST00000533908 MXD3Q9BW11 206 aa23.21■■□□□ 1.31
UBXN1-216ENST00000533908 CHMP4AQ9BY43 222 aa23.21■■□□□ 1.31
UBXN1-216ENST00000533908 BSDC1Q9NW68 430 aaPredicted RBP23.21■■□□□ 1.31
UBXN1-216ENST00000533908 SCAF8Q9UPN6 1271 aaKnown RBP23.21■■□□□ 1.31
UBXN1-216ENST00000533908 PSME4Q14997 1843 aa23.2■■□□□ 1.3
UBXN1-216ENST00000533908 USP17L3A6NCW0 530 aa23.2■■□□□ 1.3
UBXN1-216ENST00000533908 USP17L4A6NCW7 530 aa23.2■■□□□ 1.3
UBXN1-216ENST00000533908 USP17L8P0C7I0 530 aa23.2■■□□□ 1.3
UBXN1-216ENST00000533908 USP17L1Q7RTZ2 530 aa23.2■■□□□ 1.3
UBXN1-216ENST00000533908 PODNQ7Z5L7 613 aa23.2■■□□□ 1.3
UBXN1-216ENST00000533908 CDC5LQ99459 802 aaKnown RBP23.2■■□□□ 1.3
UBXN1-216ENST00000533908 SLC4A2P04920 1241 aa23.19■■□□□ 1.3
UBXN1-216ENST00000533908 RGS19P49795 217 aa23.19■■□□□ 1.3
UBXN1-216ENST00000533908 TWISTNBQ3B726 338 aaPredicted RBP23.19■■□□□ 1.3
UBXN1-216ENST00000533908 TXNRD3Q86VQ6 643 aa23.19■■□□□ 1.3
UBXN1-216ENST00000533908 MYOZ2Q9NPC6 264 aa23.19■■□□□ 1.3
UBXN1-216ENST00000533908 SLC10A3P09131 477 aa23.18■■□□□ 1.3
UBXN1-216ENST00000533908 DGKZQ13574 1117 aa23.18■■□□□ 1.3
UBXN1-216ENST00000533908 CCDC27Q2M243 656 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms