RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 PNNQ9H307 717 aaKnown RBP12.12□□□□□ -0.47
PACS1-214ENST00000533811 POLLQ9UGP5 575 aa12.12□□□□□ -0.47
PACS1-214ENST00000533811 RTL9Q8NET4 1388 aa12.12□□□□□ -0.47
PACS1-214ENST00000533811 COL4A1P02462 1669 aa12.11□□□□□ -0.47
PACS1-214ENST00000533811 ATP5J2-PTCD1G3V325 749 aa12.11□□□□□ -0.47
PACS1-214ENST00000533811 RIPK4P57078 832 aa12.11□□□□□ -0.47
PACS1-214ENST00000533811 PRPF38BQ5VTL8 546 aaKnown RBP12.11□□□□□ -0.47
PACS1-214ENST00000533811 RASAL3Q86YV0 1011 aa12.11□□□□□ -0.47
PACS1-214ENST00000533811 CDCA5Q96FF9 252 aa12.11□□□□□ -0.47
PACS1-214ENST00000533811 FAM89AQ96GI7 184 aa12.11□□□□□ -0.47
PACS1-214ENST00000533811 HDAC9Q9UKV0 1011 aa12.11□□□□□ -0.47
PACS1-214ENST00000533811 KRT24Q2M2I5 525 aa12.1□□□□□ -0.47
PACS1-214ENST00000533811 LAS1LQ9Y4W2 734 aaKnown RBP12.1□□□□□ -0.47
PACS1-214ENST00000533811 UFL1O94874 794 aa12.09□□□□□ -0.47
PACS1-214ENST00000533811 ANGEL2Q5VTE6 544 aaKnown RBP12.09□□□□□ -0.47
PACS1-214ENST00000533811 TBC1D16Q8TBP0 767 aa12.09□□□□□ -0.47
PACS1-214ENST00000533811 ZC3H12CQ9C0D7 883 aaKnown RBP12.09□□□□□ -0.47
PACS1-214ENST00000533811 CHPF2Q9P2E5 772 aa12.09□□□□□ -0.47
PACS1-214ENST00000533811 HPS5Q9UPZ3 1129 aa12.09□□□□□ -0.47
PACS1-214ENST00000533811 PAPPA2Q9BXP8 1791 aa12.08□□□□□ -0.48
PACS1-214ENST00000533811 SCARF1Q14162 830 aa12.08□□□□□ -0.48
PACS1-214ENST00000533811 TTLL12Q14166 644 aaPredicted RBP12.08□□□□□ -0.48
PACS1-214ENST00000533811 SF3B3Q15393 1217 aaKnown RBP12.08□□□□□ -0.48
PACS1-214ENST00000533811 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
PACS1-214ENST00000533811 ANKIB1Q9P2G1 1089 aa12.08□□□□□ -0.48
PACS1-214ENST00000533811 SCAF8Q9UPN6 1271 aaKnown RBP12.08□□□□□ -0.48
PACS1-214ENST00000533811 IRS4O14654 1257 aaPredicted RBP12.07□□□□□ -0.48
PACS1-214ENST00000533811 TBC1D8O95759 1140 aa12.07□□□□□ -0.48
PACS1-214ENST00000533811 VIL1P09327 827 aaKnown RBP12.07□□□□□ -0.48
PACS1-214ENST00000533811 RPS8P62241 208 aaKnown RBP12.07□□□□□ -0.48
PACS1-214ENST00000533811 LMOD3Q0VAK6 560 aa12.07□□□□□ -0.48
PACS1-214ENST00000533811 MKRN3Q13064 507 aaKnown RBP12.07□□□□□ -0.48
PACS1-214ENST00000533811 HDGFL1Q5TGJ6 251 aa12.07□□□□□ -0.48
PACS1-214ENST00000533811 ANKRD13DQ6ZTN6 518 aa12.07□□□□□ -0.48
PACS1-214ENST00000533811 MOB2Q70IA6 237 aa12.07□□□□□ -0.48
PACS1-214ENST00000533811 PLBD2Q8NHP8 589 aa12.07□□□□□ -0.48
PACS1-214ENST00000533811 GGA1Q9UJY5 639 aa12.07□□□□□ -0.48
PACS1-214ENST00000533811 PSME4Q14997 1843 aa12.07□□□□□ -0.48
PACS1-214ENST00000533811 UBE2Q2LH0YL09 131 aa12.06□□□□□ -0.48
PACS1-214ENST00000533811 RSBN1LQ6PCB5 846 aaPredicted RBP12.06□□□□□ -0.48
PACS1-214ENST00000533811 REM2Q8IYK8 340 aaPredicted RBP12.06□□□□□ -0.48
PACS1-214ENST00000533811 ZNF296Q8WUU4 475 aaPredicted RBP12.06□□□□□ -0.48
PACS1-214ENST00000533811 ISCA1Q9BUE6 129 aa12.06□□□□□ -0.48
PACS1-214ENST00000533811 SEC31BQ9NQW1 1179 aa12.06□□□□□ -0.48
PACS1-214ENST00000533811 BABAM1Q9NWV8 329 aa12.06□□□□□ -0.48
PACS1-214ENST00000533811 TMPOP42166 694 aaKnown RBP12.05□□□□□ -0.48
PACS1-214ENST00000533811 PRAMEF18Q5VWM3 479 aa12.05□□□□□ -0.48
PACS1-214ENST00000533811 AGBL3Q8NEM8 1001 aa12.05□□□□□ -0.48
PACS1-214ENST00000533811 CCDC85AQ96PX6 553 aaPredicted RBP12.05□□□□□ -0.48
PACS1-214ENST00000533811 USP17L8P0C7I0 530 aa12.04□□□□□ -0.48
PACS1-214ENST00000533811 ZNF280AP59817 542 aaPredicted RBP12.04□□□□□ -0.48
PACS1-214ENST00000533811 FKBP1BP68106 108 aa12.04□□□□□ -0.48
PACS1-214ENST00000533811 PKN2Q16513 984 aaKnown RBP12.04□□□□□ -0.48
PACS1-214ENST00000533811 CCDC146Q8IYE0 955 aa12.04□□□□□ -0.48
PACS1-214ENST00000533811 FBXW7Q969H0 707 aa12.04□□□□□ -0.48
PACS1-214ENST00000533811 MYOZ2Q9NPC6 264 aa12.04□□□□□ -0.48
PACS1-214ENST00000533811 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.04□□□□□ -0.48
PACS1-214ENST00000533811 SPEF2Q9C093 1822 aa12.04□□□□□ -0.48
PACS1-214ENST00000533811 RIC3Q7Z5B4 369 aa12.03□□□□□ -0.48
PACS1-214ENST00000533811 JARID2Q92833 1246 aaPredicted RBP12.03□□□□□ -0.48
PACS1-214ENST00000533811 PODXL2Q9NZ53 605 aa12.03□□□□□ -0.48
PACS1-214ENST00000533811 DBF4Q9UBU7 674 aaPredicted RBP12.03□□□□□ -0.48
PACS1-214ENST00000533811 USP17L3A6NCW0 530 aa12.02□□□□□ -0.49
PACS1-214ENST00000533811 USP17L4A6NCW7 530 aa12.02□□□□□ -0.49
PACS1-214ENST00000533811 GPR25O00155 361 aa12.02□□□□□ -0.49
PACS1-214ENST00000533811 PRKG1Q13976 671 aa12.02□□□□□ -0.49
PACS1-214ENST00000533811 CCDC152Q4G0S7 254 aa12.02□□□□□ -0.49
PACS1-214ENST00000533811 USP17L1Q7RTZ2 530 aa12.02□□□□□ -0.49
PACS1-214ENST00000533811 PITPNM2Q9BZ72 1349 aa12.02□□□□□ -0.49
PACS1-214ENST00000533811 CHL1O00533 1208 aa12.01□□□□□ -0.49
PACS1-214ENST00000533811 HSP90B1P14625 803 aaKnown RBP12.01□□□□□ -0.49
PACS1-214ENST00000533811 NF2P35240 595 aa12.01□□□□□ -0.49
PACS1-214ENST00000533811 GOLGA2Q08379 1002 aa12.01□□□□□ -0.49
PACS1-214ENST00000533811 NBPF9Q3BBW0 867 aa12.01□□□□□ -0.49
PACS1-214ENST00000533811 FBXO46Q6PJ61 603 aaPredicted RBP12.01□□□□□ -0.49
PACS1-214ENST00000533811 ZBTB38Q8NAP3 1195 aaPredicted RBP12.01□□□□□ -0.49
PACS1-214ENST00000533811 MYD88Q99836 296 aa12.01□□□□□ -0.49
PACS1-214ENST00000533811 HYPKQ9NX55 129 aa12.01□□□□□ -0.49
PACS1-214ENST00000533811 XDHP47989 1333 aa12.01□□□□□ -0.49
PACS1-214ENST00000533811 FKTNO75072 461 aa12□□□□□ -0.49
PACS1-214ENST00000533811 ATP2B4P23634 1241 aa12□□□□□ -0.49
PACS1-214ENST00000533811 SREBF2Q12772 1141 aa12□□□□□ -0.49
PACS1-214ENST00000533811 DUSP27Q5VZP5 1158 aa12□□□□□ -0.49
PACS1-214ENST00000533811 ANKRD18AQ8IVF6 992 aa12□□□□□ -0.49
PACS1-214ENST00000533811 GMLQ99445 158 aa12□□□□□ -0.49
PACS1-214ENST00000533811 MXD3Q9BW11 206 aa12□□□□□ -0.49
PACS1-214ENST00000533811 ZNF609O15014 1411 aa12□□□□□ -0.49
PACS1-214ENST00000533811 SASH1O94885 1247 aa11.99□□□□□ -0.49
PACS1-214ENST00000533811 HOXB7P09629 217 aa11.99□□□□□ -0.49
PACS1-214ENST00000533811 TM4SF4P48230 202 aa11.99□□□□□ -0.49
PACS1-214ENST00000533811 TRIM28Q13263 835 aaKnown RBP11.99□□□□□ -0.49
PACS1-214ENST00000533811 ARMC9Q7Z3E5 817 aa11.99□□□□□ -0.49
PACS1-214ENST00000533811 OGFOD1Q8N543 542 aa11.99□□□□□ -0.49
PACS1-214ENST00000533811 GCC1Q96CN9 775 aa11.99□□□□□ -0.49
PACS1-214ENST00000533811 R3HDMLQ9H3Y0 253 aa11.99□□□□□ -0.49
PACS1-214ENST00000533811 MYH3P11055 1940 aa11.98□□□□□ -0.49
PACS1-214ENST00000533811 PDE8AO60658 829 aa11.98□□□□□ -0.49
PACS1-214ENST00000533811 PTPN12Q05209 780 aaKnown RBP11.98□□□□□ -0.49
PACS1-214ENST00000533811 PODNQ7Z5L7 613 aa11.98□□□□□ -0.49
PACS1-214ENST00000533811 PHAXQ9H814 394 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms