RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 ASTN2O75129 1339 aaPredicted RBP10.3□□□□□ -0.76
NXF1-215ENST00000533440 RIMBP2O15034 1052 aa10.29□□□□□ -0.76
NXF1-215ENST00000533440 ANXA1P04083 346 aa10.29□□□□□ -0.76
NXF1-215ENST00000533440 SLC4A2P04920 1241 aa10.29□□□□□ -0.76
NXF1-215ENST00000533440 EIF2S2P20042 333 aaKnown RBP10.29□□□□□ -0.76
NXF1-215ENST00000533440 GPSM2P81274 684 aa10.29□□□□□ -0.76
NXF1-215ENST00000533440 SF3B3Q15393 1217 aaKnown RBP10.29□□□□□ -0.76
NXF1-215ENST00000533440 NFE2L2Q16236 605 aa10.29□□□□□ -0.76
NXF1-215ENST00000533440 COPS6Q7L5N1 327 aa10.29□□□□□ -0.76
NXF1-215ENST00000533440 CELF1Q92879 486 aaKnown RBP10.29□□□□□ -0.76
NXF1-215ENST00000533440 EYA3Q99504 573 aa10.29□□□□□ -0.76
NXF1-215ENST00000533440 HDAC9Q9UKV0 1011 aa10.29□□□□□ -0.76
NXF1-215ENST00000533440 ZNF609O15014 1411 aa10.29□□□□□ -0.76
NXF1-215ENST00000533440 DDX60Q8IY21 1712 aaKnown RBP10.29□□□□□ -0.76
NXF1-215ENST00000533440 PAPPA2Q9BXP8 1791 aa10.29□□□□□ -0.76
NXF1-215ENST00000533440 C6orf229H3BNL8 230 aa10.28□□□□□ -0.76
NXF1-215ENST00000533440 TBC1D8O95759 1140 aa10.28□□□□□ -0.76
NXF1-215ENST00000533440 NEFMP07197 916 aa10.28□□□□□ -0.76
NXF1-215ENST00000533440 ZNF280AP59817 542 aaPredicted RBP10.28□□□□□ -0.76
NXF1-215ENST00000533440 DOK7Q18PE1 504 aa10.28□□□□□ -0.76
NXF1-215ENST00000533440 FBXO46Q6PJ61 603 aaPredicted RBP10.28□□□□□ -0.76
NXF1-215ENST00000533440 TBC1D16Q8TBP0 767 aa10.28□□□□□ -0.76
NXF1-215ENST00000533440 XAGE3Q8WTP9 111 aa10.28□□□□□ -0.76
NXF1-215ENST00000533440 TSPYL4Q9UJ04 414 aa10.28□□□□□ -0.76
NXF1-215ENST00000533440 SCN9AQ15858 1988 aa10.28□□□□□ -0.76
NXF1-215ENST00000533440 COL4A1P02462 1669 aa10.28□□□□□ -0.76
NXF1-215ENST00000533440 HTTP42858 3142 aa10.27□□□□□ -0.76
NXF1-215ENST00000533440 BRCA2P51587 3418 aa10.27□□□□□ -0.77
NXF1-215ENST00000533440 GPR25O00155 361 aa10.27□□□□□ -0.77
NXF1-215ENST00000533440 TM4SF4P48230 202 aa10.27□□□□□ -0.77
NXF1-215ENST00000533440 AIMP1Q12904 312 aaKnown RBP10.27□□□□□ -0.77
NXF1-215ENST00000533440 SCARF1Q14162 830 aa10.27□□□□□ -0.77
NXF1-215ENST00000533440 ANGEL2Q5VTE6 544 aaKnown RBP10.27□□□□□ -0.77
NXF1-215ENST00000533440 CFHR5Q9BXR6 569 aa10.27□□□□□ -0.77
NXF1-215ENST00000533440 BABAM1Q9NWV8 329 aa10.27□□□□□ -0.77
NXF1-215ENST00000533440 PODXL2Q9NZ53 605 aa10.27□□□□□ -0.77
NXF1-215ENST00000533440 PITPNM2Q9BZ72 1349 aa10.27□□□□□ -0.77
NXF1-215ENST00000533440 HABP4Q5JVS0 413 aaKnown RBP10.26□□□□□ -0.77
NXF1-215ENST00000533440 MOB2Q70IA6 237 aa10.26□□□□□ -0.77
NXF1-215ENST00000533440 AGBL3Q8NEM8 1001 aa10.26□□□□□ -0.77
NXF1-215ENST00000533440 NECTIN2Q92692 538 aa10.26□□□□□ -0.77
NXF1-215ENST00000533440 GMLQ99445 158 aa10.26□□□□□ -0.77
NXF1-215ENST00000533440 ZC3H12CQ9C0D7 883 aaKnown RBP10.26□□□□□ -0.77
NXF1-215ENST00000533440 CENPFP49454 3210 aa10.26□□□□□ -0.77
NXF1-215ENST00000533440 RPS8P62241 208 aaKnown RBP10.25□□□□□ -0.77
NXF1-215ENST00000533440 RSBN1LQ6PCB5 846 aaPredicted RBP10.25□□□□□ -0.77
NXF1-215ENST00000533440 FAM89AQ96GI7 184 aa10.25□□□□□ -0.77
NXF1-215ENST00000533440 ISCA1Q9BUE6 129 aa10.25□□□□□ -0.77
NXF1-215ENST00000533440 UBE2Q2LH0YL09 131 aa10.24□□□□□ -0.77
NXF1-215ENST00000533440 MYOZ2Q9NPC6 264 aa10.24□□□□□ -0.77
NXF1-215ENST00000533440 PSME4Q14997 1843 aa10.23□□□□□ -0.77
NXF1-215ENST00000533440 ZBTB22O15209 634 aa10.23□□□□□ -0.77
NXF1-215ENST00000533440 FKTNO75072 461 aa10.23□□□□□ -0.77
NXF1-215ENST00000533440 USP17L8P0C7I0 530 aa10.23□□□□□ -0.77
NXF1-215ENST00000533440 PLBD2Q8NHP8 589 aa10.23□□□□□ -0.77
NXF1-215ENST00000533440 CCER1Q8TC90 406 aaPredicted RBP10.23□□□□□ -0.77
NXF1-215ENST00000533440 ZNF428Q96B54 188 aa10.23□□□□□ -0.77
NXF1-215ENST00000533440 PNNQ9H307 717 aaKnown RBP10.23□□□□□ -0.77
NXF1-215ENST00000533440 R3HDMLQ9H3Y0 253 aa10.23□□□□□ -0.77
NXF1-215ENST00000533440 UFL1O94874 794 aa10.22□□□□□ -0.77
NXF1-215ENST00000533440 SREBF2Q12772 1141 aa10.22□□□□□ -0.77
NXF1-215ENST00000533440 TRIM28Q13263 835 aaKnown RBP10.22□□□□□ -0.77
NXF1-215ENST00000533440 ANKRD13DQ6ZTN6 518 aa10.22□□□□□ -0.77
NXF1-215ENST00000533440 GGA1Q9UJY5 639 aa10.22□□□□□ -0.77
NXF1-215ENST00000533440 SCAF8Q9UPN6 1271 aaKnown RBP10.22□□□□□ -0.77
NXF1-215ENST00000533440 MAPK8IP3Q9UPT6 1336 aa10.22□□□□□ -0.77
NXF1-215ENST00000533440 POTEFA5A3E0 1075 aa10.21□□□□□ -0.77
NXF1-215ENST00000533440 ATP5J2-PTCD1G3V325 749 aa10.21□□□□□ -0.77
NXF1-215ENST00000533440 G3V3G9 751 aa10.21□□□□□ -0.77
NXF1-215ENST00000533440 IRS4O14654 1257 aaPredicted RBP10.21□□□□□ -0.77
NXF1-215ENST00000533440 RIPK4P57078 832 aa10.21□□□□□ -0.77
NXF1-215ENST00000533440 NBPF9Q3BBW0 867 aa10.21□□□□□ -0.77
NXF1-215ENST00000533440 DCAF8Q5TAQ9 597 aa10.21□□□□□ -0.77
NXF1-215ENST00000533440 PRAMEF18Q5VWM3 479 aa10.21□□□□□ -0.77
NXF1-215ENST00000533440 INTS3Q68E01 1043 aaKnown RBP10.21□□□□□ -0.77
NXF1-215ENST00000533440 PODNQ7Z5L7 613 aa10.21□□□□□ -0.77
NXF1-215ENST00000533440 SEC31BQ9NQW1 1179 aa10.21□□□□□ -0.77
NXF1-215ENST00000533440 CHPF2Q9P2E5 772 aa10.21□□□□□ -0.77
NXF1-215ENST00000533440 ANKIB1Q9P2G1 1089 aa10.21□□□□□ -0.77
NXF1-215ENST00000533440 SZT2Q5T011 3432 aa10.2□□□□□ -0.78
NXF1-215ENST00000533440 USP17L3A6NCW0 530 aa10.2□□□□□ -0.78
NXF1-215ENST00000533440 USP17L4A6NCW7 530 aa10.2□□□□□ -0.78
NXF1-215ENST00000533440 FXR1P51114 621 aaKnown RBP eCLIP10.2□□□□□ -0.78
NXF1-215ENST00000533440 PTPN12Q05209 780 aaKnown RBP10.2□□□□□ -0.78
NXF1-215ENST00000533440 MKRN3Q13064 507 aaKnown RBP10.2□□□□□ -0.78
NXF1-215ENST00000533440 KRT24Q2M2I5 525 aa10.2□□□□□ -0.78
NXF1-215ENST00000533440 RTL5Q5HYW3 569 aaPredicted RBP10.2□□□□□ -0.78
NXF1-215ENST00000533440 USP17L1Q7RTZ2 530 aa10.2□□□□□ -0.78
NXF1-215ENST00000533440 RBBP6Q7Z6E9 1792 aaKnown RBP10.19□□□□□ -0.78
NXF1-215ENST00000533440 CHL1O00533 1208 aa10.19□□□□□ -0.78
NXF1-215ENST00000533440 WNT10BO00744 389 aa10.19□□□□□ -0.78
NXF1-215ENST00000533440 ALDH1A1P00352 501 aa10.19□□□□□ -0.78
NXF1-215ENST00000533440 NF2P35240 595 aa10.19□□□□□ -0.78
NXF1-215ENST00000533440 TTLL12Q14166 644 aaPredicted RBP10.19□□□□□ -0.78
NXF1-215ENST00000533440 LDLRAD1Q5T700 205 aa10.19□□□□□ -0.78
NXF1-215ENST00000533440 SPRYD7Q5W111 196 aa10.19□□□□□ -0.78
NXF1-215ENST00000533440 OTOP1Q7RTM1 612 aa10.19□□□□□ -0.78
NXF1-215ENST00000533440 ZBTB38Q8NAP3 1195 aaPredicted RBP10.19□□□□□ -0.78
NXF1-215ENST00000533440 TRIM17Q9Y577 477 aa10.19□□□□□ -0.78
NXF1-215ENST00000533440 KIAA0100Q14667 2235 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms