RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 RIPOR2Q9Y4F9 1068 aa26.12■■□□□ 1.77
PTP4A2-215ENST00000533408 CCDC93Q567U6 631 aa26.11■■□□□ 1.77
PTP4A2-215ENST00000533408 SIL1Q9H173 461 aa26.11■■□□□ 1.77
PTP4A2-215ENST00000533408 ANKIB1Q9P2G1 1089 aa26.11■■□□□ 1.77
PTP4A2-215ENST00000533408 MINPP1Q9UNW1 487 aa26.11■■□□□ 1.77
PTP4A2-215ENST00000533408 DLEC1Q9Y238 1755 aa26.1■■□□□ 1.77
PTP4A2-215ENST00000533408 METTL24Q5JXM2 366 aa26.1■■□□□ 1.77
PTP4A2-215ENST00000533408 SUPT20HQ8NEM7 779 aa26.1■■□□□ 1.77
PTP4A2-215ENST00000533408 KLHDC4Q8TBB5 520 aa26.1■■□□□ 1.77
PTP4A2-215ENST00000533408 PPP4R2Q9NY27 417 aa26.1■■□□□ 1.77
PTP4A2-215ENST00000533408 PA2G4Q9UQ80 394 aaKnown RBP26.1■■□□□ 1.77
PTP4A2-215ENST00000533408 AKAP2Q9Y2D5 859 aa26.1■■□□□ 1.77
PTP4A2-215ENST00000533408 COL11A2P13942 1736 aaPredicted RBP26.09■■□□□ 1.77
PTP4A2-215ENST00000533408 C21orf2O43822 256 aa26.09■■□□□ 1.77
PTP4A2-215ENST00000533408 MPNDQ8N594 471 aa26.09■■□□□ 1.77
PTP4A2-215ENST00000533408 C7orf43Q8WVR3 580 aa26.09■■□□□ 1.77
PTP4A2-215ENST00000533408 CCDC136Q96JN2 1154 aa26.09■■□□□ 1.77
PTP4A2-215ENST00000533408 XDHP47989 1333 aa26.09■■□□□ 1.77
PTP4A2-215ENST00000533408 CHRNDQ07001 517 aa26.08■■□□□ 1.77
PTP4A2-215ENST00000533408 KIF1BPQ96EK5 621 aa26.08■■□□□ 1.77
PTP4A2-215ENST00000533408 PODXL2Q9NZ53 605 aa26.08■■□□□ 1.77
PTP4A2-215ENST00000533408 NSFL1CQ9UNZ2 370 aaKnown RBP26.08■■□□□ 1.77
PTP4A2-215ENST00000533408 LEMD3Q9Y2U8 911 aa26.08■■□□□ 1.77
PTP4A2-215ENST00000533408 ATP2B4P23634 1241 aa26.07■■□□□ 1.76
PTP4A2-215ENST00000533408 KCNJ4P48050 445 aa26.07■■□□□ 1.76
PTP4A2-215ENST00000533408 LRRC24Q50LG9 513 aa26.07■■□□□ 1.76
PTP4A2-215ENST00000533408 DPP8Q6V1X1 898 aaPredicted RBP26.07■■□□□ 1.76
PTP4A2-215ENST00000533408 ATG9AQ7Z3C6 839 aa26.07■■□□□ 1.76
PTP4A2-215ENST00000533408 PUS3Q9BZE2 481 aaKnown RBP26.07■■□□□ 1.76
PTP4A2-215ENST00000533408 KIAA1551Q9HCM1 1747 aa26.06■■□□□ 1.76
PTP4A2-215ENST00000533408 PDE8BO95263 885 aa26.06■■□□□ 1.76
PTP4A2-215ENST00000533408 EXOC6BQ9Y2D4 811 aa26.06■■□□□ 1.76
PTP4A2-215ENST00000533408 GRIN3BO60391 1043 aa26.05■■□□□ 1.76
PTP4A2-215ENST00000533408 EYA3Q99504 573 aa26.05■■□□□ 1.76
PTP4A2-215ENST00000533408 VPS33BQ9H267 617 aa26.05■■□□□ 1.76
PTP4A2-215ENST00000533408 GPR108Q9NPR9 543 aa26.05■■□□□ 1.76
PTP4A2-215ENST00000533408 GGA1Q9UJY5 639 aa26.05■■□□□ 1.76
PTP4A2-215ENST00000533408 UBE4AQ14139 1066 aa26.04■■□□□ 1.76
PTP4A2-215ENST00000533408 GPR162Q16538 588 aa26.04■■□□□ 1.76
PTP4A2-215ENST00000533408 PELP1Q8IZL8 1130 aaKnown RBP26.04■■□□□ 1.76
PTP4A2-215ENST00000533408 LRRCC1Q9C099 1032 aa26.04■■□□□ 1.76
PTP4A2-215ENST00000533408 ZNF219Q9P2Y4 722 aaPredicted RBP26.04■■□□□ 1.76
PTP4A2-215ENST00000533408 PUM3Q15397 648 aaKnown RBP26.03■■□□□ 1.76
PTP4A2-215ENST00000533408 CLASRPQ8N2M8 674 aaKnown RBP26.03■■□□□ 1.76
PTP4A2-215ENST00000533408 PSMD1Q99460 953 aa26.03■■□□□ 1.76
PTP4A2-215ENST00000533408 IFIT1P09914 478 aaKnown RBP26.02■■□□□ 1.76
PTP4A2-215ENST00000533408 GPSM2P81274 684 aa26.02■■□□□ 1.76
PTP4A2-215ENST00000533408 RHPN1Q8TCX5 695 aa26.02■■□□□ 1.76
PTP4A2-215ENST00000533408 C6orf229H3BNL8 230 aa26.01■■□□□ 1.75
PTP4A2-215ENST00000533408 CENPQQ7L2Z9 268 aaPredicted RBP26.01■■□□□ 1.75
PTP4A2-215ENST00000533408 SMC5Q8IY18 1101 aa26.01■■□□□ 1.75
PTP4A2-215ENST00000533408 LPIN2Q92539 896 aa26.01■■□□□ 1.75
PTP4A2-215ENST00000533408 RTFDC1Q9BY42 306 aaPredicted RBP26.01■■□□□ 1.75
PTP4A2-215ENST00000533408 SLX4Q8IY92 1834 aa26■■□□□ 1.75
PTP4A2-215ENST00000533408 ZNF804BA4D1E1 1349 aa26■■□□□ 1.75
PTP4A2-215ENST00000533408 IGHDP01880 384 aa26■■□□□ 1.75
PTP4A2-215ENST00000533408 SLC5A1P13866 664 aa26■■□□□ 1.75
PTP4A2-215ENST00000533408 FKBP4Q02790 459 aaKnown RBP eCLIP26■■□□□ 1.75
PTP4A2-215ENST00000533408 TFCP2Q12800 502 aa26■■□□□ 1.75
PTP4A2-215ENST00000533408 WWC3Q9ULE0 1092 aa26■■□□□ 1.75
PTP4A2-215ENST00000533408 TAF5LO75529 589 aa25.99■■□□□ 1.75
PTP4A2-215ENST00000533408 UFL1O94874 794 aa25.99■■□□□ 1.75
PTP4A2-215ENST00000533408 SASH1O94885 1247 aa25.99■■□□□ 1.75
PTP4A2-215ENST00000533408 VGLL2Q8N8G2 317 aa25.99■■□□□ 1.75
PTP4A2-215ENST00000533408 HELBQ8NG08 1087 aaPredicted RBP25.99■■□□□ 1.75
PTP4A2-215ENST00000533408 ZC3H12CQ9C0D7 883 aaKnown RBP25.99■■□□□ 1.75
PTP4A2-215ENST00000533408 TAOK3Q9H2K8 898 aa25.99■■□□□ 1.75
PTP4A2-215ENST00000533408 LTBP3Q9NS15 1303 aa25.98■■□□□ 1.75
PTP4A2-215ENST00000533408 ATP2B3Q16720 1220 aa25.98■■□□□ 1.75
PTP4A2-215ENST00000533408 ARHGAP27Q6ZUM4 889 aa25.98■■□□□ 1.75
PTP4A2-215ENST00000533408 TBC1D16Q8TBP0 767 aa25.98■■□□□ 1.75
PTP4A2-215ENST00000533408 BRCA1P38398 1863 aaKnown RBP25.98■■□□□ 1.75
PTP4A2-215ENST00000533408 APBB1O00213 710 aa25.97■■□□□ 1.75
PTP4A2-215ENST00000533408 CAVIN4Q5BKX8 364 aa25.97■■□□□ 1.75
PTP4A2-215ENST00000533408 C15orf52Q6ZUT6 534 aaKnown RBP25.97■■□□□ 1.75
PTP4A2-215ENST00000533408 G3V3G9 751 aa25.96■■□□□ 1.75
PTP4A2-215ENST00000533408 WASHC4Q2M389 1173 aa25.96■■□□□ 1.75
PTP4A2-215ENST00000533408 DCAF8Q5TAQ9 597 aa25.96■■□□□ 1.75
PTP4A2-215ENST00000533408 ANKRD45Q5TZF3 282 aa25.96■■□□□ 1.75
PTP4A2-215ENST00000533408 LRRC37AA6NMS7 1700 aa25.96■■□□□ 1.75
PTP4A2-215ENST00000533408 TAF1P21675 1872 aa25.96■■□□□ 1.75
PTP4A2-215ENST00000533408 IFIT2P09913 472 aaKnown RBP25.95■■□□□ 1.74
PTP4A2-215ENST00000533408 GORABQ5T7V8 394 aa25.95■■□□□ 1.74
PTP4A2-215ENST00000533408 NEUROD6Q96NK8 337 aa25.95■■□□□ 1.74
PTP4A2-215ENST00000533408 POLLQ9UGP5 575 aa25.95■■□□□ 1.74
PTP4A2-215ENST00000533408 A0A1B0GUL7 405 aa25.94■■□□□ 1.74
PTP4A2-215ENST00000533408 FGFR2P21802 821 aa25.94■■□□□ 1.74
PTP4A2-215ENST00000533408 TNNI3KQ59H18 835 aa25.94■■□□□ 1.74
PTP4A2-215ENST00000533408 OLFM4Q6UX06 510 aa25.94■■□□□ 1.74
PTP4A2-215ENST00000533408 FPGT-TNNI3KV9GXZ4 949 aa25.94■■□□□ 1.74
PTP4A2-215ENST00000533408 ARFGEF1Q9Y6D6 1849 aa25.93■■□□□ 1.74
PTP4A2-215ENST00000533408 ZNF804AQ7Z570 1209 aa25.93■■□□□ 1.74
PTP4A2-215ENST00000533408 VPS37DQ86XT2 251 aa25.93■■□□□ 1.74
PTP4A2-215ENST00000533408 GNL3LQ9NVN8 582 aaKnown RBP25.93■■□□□ 1.74
PTP4A2-215ENST00000533408 MED23Q9ULK4 1368 aa25.93■■□□□ 1.74
PTP4A2-215ENST00000533408 YBX3P16989 372 aaKnown RBP eCLIP25.92■■□□□ 1.74
PTP4A2-215ENST00000533408 NUCB1Q02818 461 aa25.92■■□□□ 1.74
PTP4A2-215ENST00000533408 AACSQ86V21 672 aa25.92■■□□□ 1.74
PTP4A2-215ENST00000533408 GPATCH3Q96I76 525 aa25.92■■□□□ 1.74
PTP4A2-215ENST00000533408 IL1RAPL2Q9NP60 686 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms