RNA–Protein interactions for RNA: ENST00000533316.1

ATG13-220, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-220ENST00000533316 TMPOP42166 694 aaKnown RBP13.3□□□□□ -0.28
ATG13-220ENST00000533316 KIF4BQ2VIQ3 1234 aa13.3□□□□□ -0.28
ATG13-220ENST00000533316 TBC1D16Q8TBP0 767 aa13.3□□□□□ -0.28
ATG13-220ENST00000533316 CDCA5Q96FF9 252 aa13.3□□□□□ -0.28
ATG13-220ENST00000533316 SEC31BQ9NQW1 1179 aa13.3□□□□□ -0.28
ATG13-220ENST00000533316 LRRC37AA6NMS7 1700 aa13.3□□□□□ -0.28
ATG13-220ENST00000533316 PRAMEF18Q5VWM3 479 aa13.29□□□□□ -0.28
ATG13-220ENST00000533316 CCDC102AQ96A19 550 aa13.29□□□□□ -0.28
ATG13-220ENST00000533316 CCDC85AQ96PX6 553 aaPredicted RBP13.29□□□□□ -0.28
ATG13-220ENST00000533316 ISCA1Q9BUE6 129 aa13.29□□□□□ -0.28
ATG13-220ENST00000533316 WTIPA6NIX2 430 aaPredicted RBP13.28□□□□□ -0.28
ATG13-220ENST00000533316 SLC10A3P09131 477 aa13.28□□□□□ -0.28
ATG13-220ENST00000533316 SF3B3Q15393 1217 aaKnown RBP13.28□□□□□ -0.28
ATG13-220ENST00000533316 ANGEL2Q5VTE6 544 aaKnown RBP13.28□□□□□ -0.28
ATG13-220ENST00000533316 SULF1Q8IWU6 871 aa13.28□□□□□ -0.28
ATG13-220ENST00000533316 IRS4O14654 1257 aaPredicted RBP13.27□□□□□ -0.29
ATG13-220ENST00000533316 VIL1P09327 827 aaKnown RBP13.27□□□□□ -0.29
ATG13-220ENST00000533316 RPS12P25398 132 aaKnown RBP13.27□□□□□ -0.29
ATG13-220ENST00000533316 SCARF1Q14162 830 aa13.27□□□□□ -0.29
ATG13-220ENST00000533316 HDGFL1Q5TGJ6 251 aa13.27□□□□□ -0.29
ATG13-220ENST00000533316 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.29
ATG13-220ENST00000533316 TMC4Q7Z404 712 aa13.27□□□□□ -0.29
ATG13-220ENST00000533316 RASAL3Q86YV0 1011 aa13.27□□□□□ -0.29
ATG13-220ENST00000533316 PLBD2Q8NHP8 589 aa13.27□□□□□ -0.29
ATG13-220ENST00000533316 SAGE1Q9NXZ1 904 aa13.27□□□□□ -0.29
ATG13-220ENST00000533316 AKAP11Q9UKA4 1901 aa13.27□□□□□ -0.29
ATG13-220ENST00000533316 G3V3G9 751 aa13.26□□□□□ -0.29
ATG13-220ENST00000533316 UBE2Q2LH0YL09 131 aa13.26□□□□□ -0.29
ATG13-220ENST00000533316 CHL1O00533 1208 aa13.26□□□□□ -0.29
ATG13-220ENST00000533316 UFL1O94874 794 aa13.26□□□□□ -0.29
ATG13-220ENST00000533316 TBC1D8O95759 1140 aa13.26□□□□□ -0.29
ATG13-220ENST00000533316 RPS8P62241 208 aaKnown RBP13.26□□□□□ -0.29
ATG13-220ENST00000533316 MKRN3Q13064 507 aaKnown RBP13.26□□□□□ -0.29
ATG13-220ENST00000533316 DCAF8Q5TAQ9 597 aa13.26□□□□□ -0.29
ATG13-220ENST00000533316 EYA3Q99504 573 aa13.26□□□□□ -0.29
ATG13-220ENST00000533316 MXD3Q9BW11 206 aa13.26□□□□□ -0.29
ATG13-220ENST00000533316 ZC3H12CQ9C0D7 883 aaKnown RBP13.26□□□□□ -0.29
ATG13-220ENST00000533316 PNNQ9H307 717 aaKnown RBP13.26□□□□□ -0.29
ATG13-220ENST00000533316 CTU1Q7Z7A3 348 aaKnown RBP13.25□□□□□ -0.29
ATG13-220ENST00000533316 ANKIB1Q9P2G1 1089 aa13.25□□□□□ -0.29
ATG13-220ENST00000533316 TRIM35Q9UPQ4 493 aa13.25□□□□□ -0.29
ATG13-220ENST00000533316 HPS5Q9UPZ3 1129 aa13.25□□□□□ -0.29
ATG13-220ENST00000533316 RSBN1LQ6PCB5 846 aaPredicted RBP13.24□□□□□ -0.29
ATG13-220ENST00000533316 BABAM1Q9NWV8 329 aa13.24□□□□□ -0.29
ATG13-220ENST00000533316 ZNF280AP59817 542 aaPredicted RBP13.23□□□□□ -0.29
ATG13-220ENST00000533316 ZNF296Q8WUU4 475 aaPredicted RBP13.23□□□□□ -0.29
ATG13-220ENST00000533316 PHAXQ9H814 394 aaKnown RBP13.23□□□□□ -0.29
ATG13-220ENST00000533316 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.23□□□□□ -0.29
ATG13-220ENST00000533316 PCDH10Q9P2E7 1040 aa13.23□□□□□ -0.29
ATG13-220ENST00000533316 GGA1Q9UJY5 639 aa13.23□□□□□ -0.29
ATG13-220ENST00000533316 ELL2O00472 640 aaPredicted RBP13.22□□□□□ -0.29
ATG13-220ENST00000533316 LMOD3Q0VAK6 560 aa13.22□□□□□ -0.29
ATG13-220ENST00000533316 NBPF9Q3BBW0 867 aa13.22□□□□□ -0.29
ATG13-220ENST00000533316 DUSP27Q5VZP5 1158 aa13.22□□□□□ -0.29
ATG13-220ENST00000533316 MYD88Q99836 296 aa13.22□□□□□ -0.29
ATG13-220ENST00000533316 R3HDMLQ9H3Y0 253 aa13.22□□□□□ -0.29
ATG13-220ENST00000533316 MYOZ2Q9NPC6 264 aa13.22□□□□□ -0.29
ATG13-220ENST00000533316 USP17L8P0C7I0 530 aa13.21□□□□□ -0.29
ATG13-220ENST00000533316 PRKG1Q13976 671 aa13.21□□□□□ -0.29
ATG13-220ENST00000533316 TTLL12Q14166 644 aaPredicted RBP13.21□□□□□ -0.29
ATG13-220ENST00000533316 RIC3Q7Z5B4 369 aa13.21□□□□□ -0.29
ATG13-220ENST00000533316 GMLQ99445 158 aa13.21□□□□□ -0.29
ATG13-220ENST00000533316 PODXL2Q9NZ53 605 aa13.21□□□□□ -0.29
ATG13-220ENST00000533316 DBF4Q9UBU7 674 aaPredicted RBP13.21□□□□□ -0.29
ATG13-220ENST00000533316 HDAC9Q9UKV0 1011 aa13.21□□□□□ -0.29
ATG13-220ENST00000533316 FZD1Q9UP38 647 aa13.21□□□□□ -0.29
ATG13-220ENST00000533316 PRPF38BQ5VTL8 546 aaKnown RBP13.2□□□□□ -0.3
ATG13-220ENST00000533316 ZBTB38Q8NAP3 1195 aaPredicted RBP13.2□□□□□ -0.3
ATG13-220ENST00000533316 AGBL3Q8NEM8 1001 aa13.2□□□□□ -0.3
ATG13-220ENST00000533316 FBXW7Q969H0 707 aa13.2□□□□□ -0.3
ATG13-220ENST00000533316 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
ATG13-220ENST00000533316 TRIM28Q13263 835 aaKnown RBP13.19□□□□□ -0.3
ATG13-220ENST00000533316 MBIPQ9NS73 344 aa13.19□□□□□ -0.3
ATG13-220ENST00000533316 PAPPA2Q9BXP8 1791 aa13.18□□□□□ -0.3
ATG13-220ENST00000533316 USP17L3A6NCW0 530 aa13.18□□□□□ -0.3
ATG13-220ENST00000533316 USP17L4A6NCW7 530 aa13.18□□□□□ -0.3
ATG13-220ENST00000533316 SASH1O94885 1247 aa13.18□□□□□ -0.3
ATG13-220ENST00000533316 USP17L1Q7RTZ2 530 aa13.18□□□□□ -0.3
ATG13-220ENST00000533316 GPR25O00155 361 aa13.17□□□□□ -0.3
ATG13-220ENST00000533316 PTPN12Q05209 780 aaKnown RBP13.17□□□□□ -0.3
ATG13-220ENST00000533316 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
ATG13-220ENST00000533316 CCDC152Q4G0S7 254 aa13.17□□□□□ -0.3
ATG13-220ENST00000533316 TXNRD3Q86VQ6 643 aa13.17□□□□□ -0.3
ATG13-220ENST00000533316 ANKRD18AQ8IVF6 992 aa13.17□□□□□ -0.3
ATG13-220ENST00000533316 XDHP47989 1333 aa13.16□□□□□ -0.3
ATG13-220ENST00000533316 PDE8AO60658 829 aa13.16□□□□□ -0.3
ATG13-220ENST00000533316 PCCAP05165 728 aaPredicted RBP13.16□□□□□ -0.3
ATG13-220ENST00000533316 ATP2B4P23634 1241 aa13.16□□□□□ -0.3
ATG13-220ENST00000533316 KLRK1P26718 216 aa13.16□□□□□ -0.3
ATG13-220ENST00000533316 FKBP1BP68106 108 aa13.16□□□□□ -0.3
ATG13-220ENST00000533316 RUNDC1Q96C34 613 aa13.16□□□□□ -0.3
ATG13-220ENST00000533316 ADAMTS8Q9UP79 889 aa13.16□□□□□ -0.3
ATG13-220ENST00000533316 PSME4Q14997 1843 aa13.16□□□□□ -0.3
ATG13-220ENST00000533316 WNT10BO00744 389 aa13.15□□□□□ -0.3
ATG13-220ENST00000533316 HOXB7P09629 217 aa13.15□□□□□ -0.3
ATG13-220ENST00000533316 DACT2Q5SW24 774 aa13.15□□□□□ -0.3
ATG13-220ENST00000533316 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.3
ATG13-220ENST00000533316 C8orf58Q8NAV2 365 aa13.15□□□□□ -0.3
ATG13-220ENST00000533316 CWC25Q9NXE8 425 aaPredicted RBP13.15□□□□□ -0.3
ATG13-220ENST00000533316 SPEF2Q9C093 1822 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms