RNA–Protein interactions for RNA: ENST00000533232.5

SOX9-AS1-212, SOX9 antisense RNA 1, humanhuman

TSL 1 (best)

Gene SOX9-AS1, Length 1,739 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-212ENST00000533232 TSGA10IPQ3SY00 556 aa9.32□□□□□ -0.92
SOX9-AS1-212ENST00000533232 CREB3L3Q68CJ9 461 aa9.32□□□□□ -0.92
SOX9-AS1-212ENST00000533232 BLOC1S2Q6QNY1 142 aa9.32□□□□□ -0.92
SOX9-AS1-212ENST00000533232 FMNL2Q96PY5 1086 aa9.32□□□□□ -0.92
SOX9-AS1-212ENST00000533232 FSD1Q9BTV5 496 aa9.32□□□□□ -0.92
SOX9-AS1-212ENST00000533232 COPRSQ9NQ92 184 aa9.32□□□□□ -0.92
SOX9-AS1-212ENST00000533232 ZKSCAN5Q9Y2L8 839 aa9.32□□□□□ -0.92
SOX9-AS1-212ENST00000533232 RBM8AQ9Y5S9 174 aaKnown RBP9.32□□□□□ -0.92
SOX9-AS1-212ENST00000533232 DCCP43146 1447 aa9.32□□□□□ -0.92
SOX9-AS1-212ENST00000533232 MRC1P22897 1456 aa9.32□□□□□ -0.92
SOX9-AS1-212ENST00000533232 SASH1O94885 1247 aa9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 PTMAP06454 111 aaKnown RBP9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 PHKG2P15735 406 aa9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 ATF3P18847 181 aa9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 GJB2P29033 226 aa9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 PDIA6Q15084 440 aa9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 WNT2BQ93097 391 aa9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 EAF2Q96CJ1 260 aaPredicted RBP9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 NLRP2Q9NX02 1062 aa9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 PA2G4Q9UQ80 394 aaKnown RBP9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 TPM3P06753 285 aa9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 ATP5JP18859 108 aa9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 KRT85P78386 507 aa9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 PTH1RQ03431 593 aa9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 NMIQ13287 307 aaPredicted RBP9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 CCDC83Q8IWF9 413 aa9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 RBM33Q96EV2 1170 aaKnown RBP9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 NSFL1CQ9UNZ2 370 aaKnown RBP9.31□□□□□ -0.92
SOX9-AS1-212ENST00000533232 SLC27A2O14975 620 aa9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 RRP9O43818 475 aaKnown RBP9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 IGKV5-2P06315 115 aa9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 CSB-PGBD3P0DP91 1061 aa9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 GLIPR1L2Q4G1C9 344 aa9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 LARP1BQ659C4 914 aaKnown RBP9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 TRAF7Q6Q0C0 670 aa9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 COPS6Q7L5N1 327 aa9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 XAGE3Q8WTP9 111 aa9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 RNF25Q96BH1 459 aaPredicted RBP9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 KAZALD1Q96I82 304 aa9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 MYD88Q99836 296 aa9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 CCDC8Q9H0W5 538 aaPredicted RBP9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 TAOK2Q9UL54 1235 aa9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 RGPD5Q99666 1765 aa9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 ELP1O95163 1332 aa9.3□□□□□ -0.92
SOX9-AS1-212ENST00000533232 JCADQ9P266 1359 aa9.29□□□□□ -0.92
SOX9-AS1-212ENST00000533232 MED23Q9ULK4 1368 aa9.29□□□□□ -0.92
SOX9-AS1-212ENST00000533232 HMGB1P09429 215 aaKnown RBP9.29□□□□□ -0.92
SOX9-AS1-212ENST00000533232 RPS6KB1P23443 525 aa9.29□□□□□ -0.92
SOX9-AS1-212ENST00000533232 XPCQ01831 940 aaPredicted RBP9.29□□□□□ -0.92
SOX9-AS1-212ENST00000533232 RABL6Q3YEC7 729 aaPredicted RBP9.29□□□□□ -0.92
SOX9-AS1-212ENST00000533232 NFATC2IPQ8NCF5 419 aa9.29□□□□□ -0.92
SOX9-AS1-212ENST00000533232 SCAND2PQ9GZW5 306 aaPredicted RBP9.29□□□□□ -0.92
SOX9-AS1-212ENST00000533232 BOLA2Q9H3K6 86 aa9.29□□□□□ -0.92
SOX9-AS1-212ENST00000533232 MTMR6Q9Y217 621 aa9.29□□□□□ -0.92
SOX9-AS1-212ENST00000533232 CNPY2Q9Y2B0 182 aa9.29□□□□□ -0.92
SOX9-AS1-212ENST00000533232 KIF3AQ9Y496 699 aa9.29□□□□□ -0.92
SOX9-AS1-212ENST00000533232 KDM6AO15550 1401 aaPredicted RBP9.29□□□□□ -0.92
SOX9-AS1-212ENST00000533232 TBC1D12O60347 775 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 GADD45BO75293 160 aaPredicted RBP9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 MYL6BP14649 208 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 ZC3H6P61129 1189 aaKnown RBP9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 KIAA2012Q0VF49 1180 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 LRRFIP1Q32MZ4 808 aaKnown RBP9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 ADCK5Q3MIX3 580 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 USPL1Q5W0Q7 1092 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 PLBD2Q8NHP8 589 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 MFRPQ9BY79 579 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 C5P01031 1676 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 PKD1L3Q7Z443 1732 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 PRAMEF22A3QJZ6 481 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 VPS37CA5D8V6 355 aaPredicted RBP9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 GOLGA6L4A6NEF3 574 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 BHMG1C9JSJ3 638 aaPredicted RBP9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 ITGBL1O95965 494 aaPredicted RBP9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 CCDC192P0DO97 292 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 CABP4P57796 275 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 ME3Q16798 604 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 TNNI3KQ59H18 835 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 CADPS2Q86UW7 1296 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 RNF214Q8ND24 703 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 ZNF496Q96IT1 587 aaPredicted RBP9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 FAM227BQ96M60 508 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 SIL1Q9H173 461 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 GDPD2Q9HCC8 539 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 GPR108Q9NPR9 543 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 FPGT-TNNI3KV9GXZ4 949 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 LAMB4A4D0S4 1761 aa9.28□□□□□ -0.92
SOX9-AS1-212ENST00000533232 AFDNP55196 1824 aaKnown RBP9.27□□□□□ -0.92
SOX9-AS1-212ENST00000533232 PARP4Q9UKK3 1724 aaKnown RBP9.27□□□□□ -0.93
SOX9-AS1-212ENST00000533232 GOLGA6L6A8MZA4 724 aa9.27□□□□□ -0.93
SOX9-AS1-212ENST00000533232 FIBPO43427 364 aa9.27□□□□□ -0.93
SOX9-AS1-212ENST00000533232 SLC39A6Q13433 755 aa9.27□□□□□ -0.93
SOX9-AS1-212ENST00000533232 FOXD4L6Q3SYB3 417 aaPredicted RBP9.27□□□□□ -0.93
SOX9-AS1-212ENST00000533232 MCMDC2Q4G0Z9 681 aa9.27□□□□□ -0.93
SOX9-AS1-212ENST00000533232 FOXD4L3Q6VB84 417 aaPredicted RBP9.27□□□□□ -0.93
SOX9-AS1-212ENST00000533232 CHAMP1Q96JM3 812 aa9.27□□□□□ -0.93
SOX9-AS1-212ENST00000533232 TCHHQ07283 1943 aa9.27□□□□□ -0.93
SOX9-AS1-212ENST00000533232 A0A087WZG4 1122 aa9.26□□□□□ -0.93
SOX9-AS1-212ENST00000533232 A0A0D9SFI3 127 aa9.26□□□□□ -0.93
SOX9-AS1-212ENST00000533232 TAF5LO75529 589 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms