RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 TNIP1Q15025 636 aa38.44■■■■□ 3.74
SSSCA1-207ENST00000533115 SSH1Q8WYL5 1049 aa38.44■■■■□ 3.74
SSSCA1-207ENST00000533115 GPR101Q96P66 508 aaPredicted RBP38.44■■■■□ 3.74
SSSCA1-207ENST00000533115 EPS15P42566 896 aa38.43■■■■□ 3.74
SSSCA1-207ENST00000533115 DBNDD1Q9H9R9 158 aa38.43■■■■□ 3.74
SSSCA1-207ENST00000533115 CLEC11AQ9Y240 323 aa38.43■■■■□ 3.74
SSSCA1-207ENST00000533115 XDHP47989 1333 aa38.42■■■■□ 3.74
SSSCA1-207ENST00000533115 ADAMTSL1Q8N6G6 1762 aa38.42■■■■□ 3.74
SSSCA1-207ENST00000533115 ALDH1L1O75891 902 aa38.42■■■■□ 3.74
SSSCA1-207ENST00000533115 DNAJC5GQ8N7S2 189 aa38.42■■■■□ 3.74
SSSCA1-207ENST00000533115 ZC3H12CQ9C0D7 883 aaKnown RBP38.42■■■■□ 3.74
SSSCA1-207ENST00000533115 ITGA6P23229 1130 aa38.41■■■■□ 3.74
SSSCA1-207ENST00000533115 FAM161AQ3B820 660 aa38.41■■■■□ 3.74
SSSCA1-207ENST00000533115 SRCIN1Q9C0H9 1055 aa38.41■■■■□ 3.74
SSSCA1-207ENST00000533115 GRM8O00222 908 aa38.4■■■■□ 3.74
SSSCA1-207ENST00000533115 IGHMBP2P38935 993 aaKnown RBP38.4■■■■□ 3.74
SSSCA1-207ENST00000533115 GMPSP49915 693 aaPredicted RBP38.4■■■■□ 3.74
SSSCA1-207ENST00000533115 GPRC5DQ9NZD1 345 aa38.4■■■■□ 3.74
SSSCA1-207ENST00000533115 MINPP1Q9UNW1 487 aa38.4■■■■□ 3.74
SSSCA1-207ENST00000533115 PTPRCP08575 1304 aa38.39■■■■□ 3.74
SSSCA1-207ENST00000533115 DOK7Q18PE1 504 aa38.39■■■■□ 3.74
SSSCA1-207ENST00000533115 ALDH1L2Q3SY69 923 aa38.39■■■■□ 3.74
SSSCA1-207ENST00000533115 SPEF2Q9C093 1822 aa38.39■■■■□ 3.74
SSSCA1-207ENST00000533115 ECE2O60344 883 aa38.38■■■■□ 3.73
SSSCA1-207ENST00000533115 ATP2B4P23634 1241 aa38.38■■■■□ 3.73
SSSCA1-207ENST00000533115 FOXO4P98177 505 aa38.38■■■■□ 3.73
SSSCA1-207ENST00000533115 C9orf78Q9NZ63 289 aaPredicted RBP38.38■■■■□ 3.73
SSSCA1-207ENST00000533115 BCL2L13Q9BXK5 485 aa38.37■■■■□ 3.73
SSSCA1-207ENST00000533115 USP50Q70EL3 339 aaPredicted RBP38.36■■■■□ 3.73
SSSCA1-207ENST00000533115 CT47B1P0C2W7 299 aaPredicted RBP38.35■■■■□ 3.73
SSSCA1-207ENST00000533115 MPHOSPH8Q99549 860 aa38.34■■■■□ 3.73
SSSCA1-207ENST00000533115 ADARB2Q9NS39 739 aaKnown RBP38.34■■■■□ 3.73
SSSCA1-207ENST00000533115 PASKQ96RG2 1323 aa38.34■■■■□ 3.73
SSSCA1-207ENST00000533115 ANKRD18BA2A2Z9 1011 aa38.33■■■■□ 3.73
SSSCA1-207ENST00000533115 G3V3G9 751 aa38.33■■■■□ 3.73
SSSCA1-207ENST00000533115 PSMD14O00487 310 aa38.33■■■■□ 3.73
SSSCA1-207ENST00000533115 ITGBL1O95965 494 aaPredicted RBP38.33■■■■□ 3.73
SSSCA1-207ENST00000533115 DCAF8Q5TAQ9 597 aa38.33■■■■□ 3.73
SSSCA1-207ENST00000533115 MAP1SQ66K74 1059 aaPredicted RBP38.32■■■■□ 3.72
SSSCA1-207ENST00000533115 KCNQ5Q9NR82 932 aa38.32■■■■□ 3.72
SSSCA1-207ENST00000533115 SMC4Q9NTJ3 1288 aa38.32■■■■□ 3.72
SSSCA1-207ENST00000533115 EPHA10Q5JZY3 1008 aa38.31■■■■□ 3.72
SSSCA1-207ENST00000533115 CNTROBQ8N137 903 aa38.31■■■■□ 3.72
SSSCA1-207ENST00000533115 KLRG1Q96E93 195 aa38.31■■■■□ 3.72
SSSCA1-207ENST00000533115 CHMP3Q9Y3E7 222 aa38.31■■■■□ 3.72
SSSCA1-207ENST00000533115 CCT4P50991 539 aaKnown RBP38.3■■■■□ 3.72
SSSCA1-207ENST00000533115 IFIT5Q13325 482 aaKnown RBP38.3■■■■□ 3.72
SSSCA1-207ENST00000533115 LMBR1LQ6UX01 489 aa38.3■■■■□ 3.72
SSSCA1-207ENST00000533115 WTIPA6NIX2 430 aaPredicted RBP38.29■■■■□ 3.72
SSSCA1-207ENST00000533115 ZBTB12Q9Y330 459 aaPredicted RBP38.29■■■■□ 3.72
SSSCA1-207ENST00000533115 DPF2Q92785 391 aa38.28■■■■□ 3.72
SSSCA1-207ENST00000533115 ANKRD2Q9GZV1 360 aa38.28■■■■□ 3.72
SSSCA1-207ENST00000533115 CNOT7Q9UIV1 285 aaKnown RBP38.28■■■■□ 3.72
SSSCA1-207ENST00000533115 CREBZFQ9NS37 354 aa38.27■■■■□ 3.72
SSSCA1-207ENST00000533115 LEMD3Q9Y2U8 911 aa38.27■■■■□ 3.72
SSSCA1-207ENST00000533115 UTYO14607 1347 aa38.27■■■■□ 3.72
SSSCA1-207ENST00000533115 MED23Q9ULK4 1368 aa38.27■■■■□ 3.72
SSSCA1-207ENST00000533115 NBPF7P0C2Y1 421 aaPredicted RBP38.26■■■■□ 3.72
SSSCA1-207ENST00000533115 RPS12P25398 132 aaKnown RBP38.25■■■■□ 3.71
SSSCA1-207ENST00000533115 SCN9AQ15858 1988 aa38.25■■■■□ 3.71
SSSCA1-207ENST00000533115 SUCLG2Q96I99 432 aa38.25■■■■□ 3.71
SSSCA1-207ENST00000533115 H7C1D1 291 aa38.24■■■■□ 3.71
SSSCA1-207ENST00000533115 CCDC57Q2TAC2 916 aa38.24■■■■□ 3.71
SSSCA1-207ENST00000533115 MICALL2Q8IY33 904 aa38.24■■■■□ 3.71
SSSCA1-207ENST00000533115 SHTN1A0MZ66 631 aa38.23■■■■□ 3.71
SSSCA1-207ENST00000533115 VIL1P09327 827 aaKnown RBP38.23■■■■□ 3.71
SSSCA1-207ENST00000533115 CHRNDQ07001 517 aa38.23■■■■□ 3.71
SSSCA1-207ENST00000533115 PODNQ7Z5L7 613 aa38.22■■■■□ 3.71
SSSCA1-207ENST00000533115 KAZALD1Q96I82 304 aa38.22■■■■□ 3.71
SSSCA1-207ENST00000533115 ZNF804BA4D1E1 1349 aa38.21■■■■□ 3.71
SSSCA1-207ENST00000533115 BRPF1P55201 1214 aaPredicted RBP38.2■■■■□ 3.71
SSSCA1-207ENST00000533115 TRPM4Q8TD43 1214 aa38.2■■■■□ 3.71
SSSCA1-207ENST00000533115 HIRAP54198 1017 aaPredicted RBP38.19■■■■□ 3.7
SSSCA1-207ENST00000533115 TAF7LQ5H9L4 462 aa38.19■■■■□ 3.7
SSSCA1-207ENST00000533115 ZNF594Q96JF6 807 aaPredicted RBP38.19■■■■□ 3.7
SSSCA1-207ENST00000533115 NOB1Q9ULX3 412 aaKnown RBP38.19■■■■□ 3.7
SSSCA1-207ENST00000533115 TMEM88BA6NKF7 163 aa38.18■■■■□ 3.7
SSSCA1-207ENST00000533115 KCNJ4P48050 445 aa38.17■■■■□ 3.7
SSSCA1-207ENST00000533115 RARSP54136 660 aaKnown RBP38.17■■■■□ 3.7
SSSCA1-207ENST00000533115 HNRNPUQ00839 825 aaKnown RBP eCLIP38.17■■■■□ 3.7
SSSCA1-207ENST00000533115 TXNRD3Q86VQ6 643 aa38.17■■■■□ 3.7
SSSCA1-207ENST00000533115 JMYQ8N9B5 988 aa38.17■■■■□ 3.7
SSSCA1-207ENST00000533115 ZC3H15Q8WU90 426 aaKnown RBP38.17■■■■□ 3.7
SSSCA1-207ENST00000533115 PGAP2Q9UHJ9 254 aa38.17■■■■□ 3.7
SSSCA1-207ENST00000533115 RSBN1LQ6PCB5 846 aaPredicted RBP38.16■■■■□ 3.7
SSSCA1-207ENST00000533115 LDHAL6AQ6ZMR3 332 aa38.16■■■■□ 3.7
SSSCA1-207ENST00000533115 COA1Q9GZY4 146 aa38.16■■■■□ 3.7
SSSCA1-207ENST00000533115 USP44Q9H0E7 712 aa38.16■■■■□ 3.7
SSSCA1-207ENST00000533115 BICC1Q9H694 974 aaKnown RBP38.16■■■■□ 3.7
SSSCA1-207ENST00000533115 PSME4Q14997 1843 aa38.16■■■■□ 3.7
SSSCA1-207ENST00000533115 USP17L3A6NCW0 530 aa38.15■■■■□ 3.7
SSSCA1-207ENST00000533115 USP17L4A6NCW7 530 aa38.15■■■■□ 3.7
SSSCA1-207ENST00000533115 USP17L1Q7RTZ2 530 aa38.15■■■■□ 3.7
SSSCA1-207ENST00000533115 SAMD7Q7Z3H4 446 aa38.15■■■■□ 3.7
SSSCA1-207ENST00000533115 TAF5LO75529 589 aa38.14■■■■□ 3.7
SSSCA1-207ENST00000533115 RABL6Q3YEC7 729 aaPredicted RBP38.14■■■■□ 3.7
SSSCA1-207ENST00000533115 AGBL3Q8NEM8 1001 aa38.14■■■■□ 3.7
SSSCA1-207ENST00000533115 HELBQ8NG08 1087 aaPredicted RBP38.14■■■■□ 3.7
SSSCA1-207ENST00000533115 ZNF609O15014 1411 aa38.13■■■■□ 3.7
SSSCA1-207ENST00000533115 KLRK1P26718 216 aa38.13■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms