RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 DDX21Q9NR30 783 aaKnown RBP eCLIP12.33□□□□□ -0.44
COLCA1-203ENST00000532918 EDC4Q6P2E9 1401 aaKnown RBP12.32□□□□□ -0.44
COLCA1-203ENST00000532918 POLR3AO14802 1390 aaPredicted RBP12.32□□□□□ -0.44
COLCA1-203ENST00000532918 ZBTB43O43298 467 aa12.32□□□□□ -0.44
COLCA1-203ENST00000532918 SLC4A8Q2Y0W8 1093 aa12.32□□□□□ -0.44
COLCA1-203ENST00000532918 NIM1KQ8IY84 436 aa12.32□□□□□ -0.44
COLCA1-203ENST00000532918 PLBD2Q8NHP8 589 aa12.32□□□□□ -0.44
COLCA1-203ENST00000532918 FERMT1Q9BQL6 677 aa12.32□□□□□ -0.44
COLCA1-203ENST00000532918 SPDYE3A6NKU9 549 aa12.32□□□□□ -0.44
COLCA1-203ENST00000532918 EZRP15311 586 aaKnown RBP12.32□□□□□ -0.44
COLCA1-203ENST00000532918 CCT2P78371 535 aaKnown RBP12.32□□□□□ -0.44
COLCA1-203ENST00000532918 TCIRG1Q13488 830 aa12.32□□□□□ -0.44
COLCA1-203ENST00000532918 CNNM3Q8NE01 707 aa12.32□□□□□ -0.44
COLCA1-203ENST00000532918 HOXB7P09629 217 aa12.32□□□□□ -0.44
COLCA1-203ENST00000532918 RRP36Q96EU6 259 aaKnown RBP12.32□□□□□ -0.44
COLCA1-203ENST00000532918 CCDC97Q96F63 343 aaPredicted RBP12.32□□□□□ -0.44
COLCA1-203ENST00000532918 NAP1L4Q99733 375 aaKnown RBP12.32□□□□□ -0.44
COLCA1-203ENST00000532918 MCM9Q9NXL9 1143 aa12.32□□□□□ -0.44
COLCA1-203ENST00000532918 CFAP100Q494V2 611 aa12.32□□□□□ -0.44
COLCA1-203ENST00000532918 IDEP14735 1019 aa12.31□□□□□ -0.44
COLCA1-203ENST00000532918 FBLN1P23142 703 aa12.31□□□□□ -0.44
COLCA1-203ENST00000532918 RTN1Q16799 776 aa12.31□□□□□ -0.44
COLCA1-203ENST00000532918 DPY19L2Q6NUT2 758 aa12.31□□□□□ -0.44
COLCA1-203ENST00000532918 BACH2Q9BYV9 841 aa12.31□□□□□ -0.44
COLCA1-203ENST00000532918 PDE8AO60658 829 aa12.31□□□□□ -0.44
COLCA1-203ENST00000532918 PAG1Q9NWQ8 432 aa12.31□□□□□ -0.44
COLCA1-203ENST00000532918 CCDC40Q4G0X9 1142 aa12.31□□□□□ -0.44
COLCA1-203ENST00000532918 FERMT3Q86UX7 667 aa12.31□□□□□ -0.44
COLCA1-203ENST00000532918 ZRANB1Q9UGI0 708 aa12.31□□□□□ -0.44
COLCA1-203ENST00000532918 WWC3Q9ULE0 1092 aa12.31□□□□□ -0.44
COLCA1-203ENST00000532918 STX6O43752 255 aa12.31□□□□□ -0.44
COLCA1-203ENST00000532918 CCDC172P0C7W6 258 aa12.3□□□□□ -0.44
COLCA1-203ENST00000532918 ZNF790Q6PG37 636 aa12.3□□□□□ -0.44
COLCA1-203ENST00000532918 TNPO1Q92973 898 aaKnown RBP12.3□□□□□ -0.44
COLCA1-203ENST00000532918 TTC41PQ6P2S7 1318 aa12.3□□□□□ -0.44
COLCA1-203ENST00000532918 HIBADHP31937 336 aaKnown RBP12.3□□□□□ -0.44
COLCA1-203ENST00000532918 PRIM1P49642 420 aaKnown RBP12.3□□□□□ -0.44
COLCA1-203ENST00000532918 NAPAP54920 295 aa12.3□□□□□ -0.44
COLCA1-203ENST00000532918 ARHGEF10LQ9HCE6 1279 aa12.3□□□□□ -0.44
COLCA1-203ENST00000532918 ERLIN1O75477 346 aa12.3□□□□□ -0.44
COLCA1-203ENST00000532918 CALML3P27482 149 aa12.3□□□□□ -0.44
COLCA1-203ENST00000532918 RXRBP28702 533 aa12.3□□□□□ -0.44
COLCA1-203ENST00000532918 ARHGAP29Q52LW3 1261 aa12.3□□□□□ -0.44
COLCA1-203ENST00000532918 CCDC184Q52MB2 194 aa12.3□□□□□ -0.44
COLCA1-203ENST00000532918 RMND1Q9NWS8 449 aa12.3□□□□□ -0.44
COLCA1-203ENST00000532918 YEATS2Q9ULM3 1422 aa12.3□□□□□ -0.44
COLCA1-203ENST00000532918 IVNS1ABPQ9Y6Y0 642 aa12.3□□□□□ -0.44
COLCA1-203ENST00000532918 RNF113AO15541 343 aaKnown RBP12.3□□□□□ -0.44
COLCA1-203ENST00000532918 BMP2KLQ5H9B9 411 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 HEATR3Q7Z4Q2 680 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 MAST1Q9Y2H9 1570 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 A0A1W2PP64 1363 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 ERVV-2B6SEH9 535 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 GUCY1B3Q02153 619 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 TTC22Q5TAA0 569 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 CCDC144CPQ8IYA2 1237 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 SPC24Q8NBT2 197 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 WDR66Q8TBY9 1149 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 KLF18A0A0U1RQI7 1052 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 H7C1D1 291 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 RBM25P49756 843 aaKnown RBP12.29□□□□□ -0.44
COLCA1-203ENST00000532918 MRPL50Q8N5N7 158 aaKnown RBP12.29□□□□□ -0.44
COLCA1-203ENST00000532918 KLHL10Q6JEL2 608 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 TCERG1LQ5VWI1 586 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 TEX11Q8IYF3 940 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 LRRC45Q96CN5 670 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 QTRT2Q9H974 415 aaKnown RBP12.29□□□□□ -0.44
COLCA1-203ENST00000532918 ZNF408Q9H9D4 720 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 SLC52A2Q9HAB3 445 aa12.29□□□□□ -0.44
COLCA1-203ENST00000532918 COL17A1Q9UMD9 1497 aaPredicted RBP12.28□□□□□ -0.44
COLCA1-203ENST00000532918 MTIF2P46199 727 aaKnown RBP12.28□□□□□ -0.44
COLCA1-203ENST00000532918 ANKRD44Q8N8A2 993 aa12.28□□□□□ -0.44
COLCA1-203ENST00000532918 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.28□□□□□ -0.44
COLCA1-203ENST00000532918 TRMT1LQ7Z2T5 733 aaKnown RBP12.28□□□□□ -0.44
COLCA1-203ENST00000532918 GNA11P29992 359 aa12.28□□□□□ -0.44
COLCA1-203ENST00000532918 MAGEB6Q8N7X4 407 aa12.28□□□□□ -0.44
COLCA1-203ENST00000532918 ZSCAN16Q9H4T2 348 aaPredicted RBP12.28□□□□□ -0.44
COLCA1-203ENST00000532918 CCDC112Q8NEF3 446 aa12.28□□□□□ -0.44
COLCA1-203ENST00000532918 GTPBP4Q9BZE4 634 aaKnown RBP12.28□□□□□ -0.44
COLCA1-203ENST00000532918 PBRM1Q86U86 1689 aa12.27□□□□□ -0.44
COLCA1-203ENST00000532918 USO1O60763 962 aaKnown RBP12.27□□□□□ -0.44
COLCA1-203ENST00000532918 PUM3Q15397 648 aaKnown RBP12.27□□□□□ -0.44
COLCA1-203ENST00000532918 SKIDA1Q1XH10 827 aa12.27□□□□□ -0.44
COLCA1-203ENST00000532918 MEIS3Q99687 375 aa12.27□□□□□ -0.44
COLCA1-203ENST00000532918 EXOC1Q9NV70 894 aa12.27□□□□□ -0.44
COLCA1-203ENST00000532918 KRT13P13646 458 aa12.27□□□□□ -0.45
COLCA1-203ENST00000532918 TBC1D22AQ8WUA7 517 aa12.27□□□□□ -0.45
COLCA1-203ENST00000532918 YEATS4O95619 227 aa12.27□□□□□ -0.45
COLCA1-203ENST00000532918 C8orf58Q8NAV2 365 aa12.27□□□□□ -0.45
COLCA1-203ENST00000532918 DDX19AQ9NUU7 478 aaKnown RBP12.27□□□□□ -0.45
COLCA1-203ENST00000532918 NOD1Q9Y239 953 aa12.27□□□□□ -0.45
COLCA1-203ENST00000532918 TNFAIP1Q13829 316 aa12.26□□□□□ -0.45
COLCA1-203ENST00000532918 FAM196AQ6ZSG2 479 aa12.26□□□□□ -0.45
COLCA1-203ENST00000532918 METTL22Q9BUU2 404 aaPredicted RBP12.26□□□□□ -0.45
COLCA1-203ENST00000532918 IMPG2Q9BZV3 1241 aa12.26□□□□□ -0.45
COLCA1-203ENST00000532918 GPHNQ9NQX3 736 aaPredicted RBP12.26□□□□□ -0.45
COLCA1-203ENST00000532918 BRPF3Q9ULD4 1205 aa12.26□□□□□ -0.45
COLCA1-203ENST00000532918 PHACTR2O75167 634 aa12.26□□□□□ -0.45
COLCA1-203ENST00000532918 HELBQ8NG08 1087 aaPredicted RBP12.26□□□□□ -0.45
COLCA1-203ENST00000532918 PRC1O43663 620 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms