RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 SLC27A2O14975 620 aa21.32■■□□□ 1
UBXN1-213ENST00000532904 NMIQ13287 307 aaPredicted RBP21.32■■□□□ 1
UBXN1-213ENST00000532904 LARP1BQ659C4 914 aaKnown RBP21.32■■□□□ 1
UBXN1-213ENST00000532904 ALDH8A1Q9H2A2 487 aaPredicted RBP21.32■■□□□ 1
UBXN1-213ENST00000532904 DTNBO60941 627 aa21.31■■□□□ 1
UBXN1-213ENST00000532904 KRT85P78386 507 aa21.31■■□□□ 1
UBXN1-213ENST00000532904 DOT1LQ8TEK3 1739 aa21.31■■□□□ 1
UBXN1-213ENST00000532904 FAM227BQ96M60 508 aa21.31■■□□□ 1
UBXN1-213ENST00000532904 SLIT2O94813 1529 aa21.3■■□□□ 1
UBXN1-213ENST00000532904 PDCP20941 246 aa21.3■■□□□ 1
UBXN1-213ENST00000532904 TRIM28Q13263 835 aaKnown RBP21.3■■□□□ 1
UBXN1-213ENST00000532904 TTC6Q86TZ1 520 aa21.3■■□□□ 1
UBXN1-213ENST00000532904 C17orf53Q8N3J3 647 aaPredicted RBP21.3■■□□□ 1
UBXN1-213ENST00000532904 KCNJ4P48050 445 aa21.3■■□□□ 1
UBXN1-213ENST00000532904 PTPN12Q05209 780 aaKnown RBP21.3■■□□□ 1
UBXN1-213ENST00000532904 ANKRD1Q15327 319 aa21.3■■□□□ 1
UBXN1-213ENST00000532904 DNAJC10Q8IXB1 793 aa21.3■■□□□ 1
UBXN1-213ENST00000532904 KIAA1524Q8TCG1 905 aa21.29■■□□□ 1
UBXN1-213ENST00000532904 EAF2Q96CJ1 260 aaPredicted RBP21.29■■□□□ 1
UBXN1-213ENST00000532904 ISCA1Q9BUE6 129 aa21.29■■□□□ 1
UBXN1-213ENST00000532904 KAT6BQ8WYB5 2073 aa21.29■■□□□ 1
UBXN1-213ENST00000532904 ADAMTS2O95450 1211 aa21.28■■□□□ 1
UBXN1-213ENST00000532904 FOXO4P98177 505 aa21.28■■□□□ 1
UBXN1-213ENST00000532904 PLCB2Q00722 1185 aa21.28■■□□□ 1
UBXN1-213ENST00000532904 CDC37L1Q7L3B6 337 aa21.28■■□□□ 1
UBXN1-213ENST00000532904 KCNF1Q9H3M0 494 aa21.28■■□□□ 1
UBXN1-213ENST00000532904 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.28■■□□□ 1
UBXN1-213ENST00000532904 SPATA31A5Q5VU36 1347 aa21.28■■□□□ 1
UBXN1-213ENST00000532904 SPATA31A7Q8IWB4 1347 aa21.28■■□□□ 1
UBXN1-213ENST00000532904 TCIRG1Q13488 830 aa21.28■■□□□ 1
UBXN1-213ENST00000532904 ZBTB3Q9H5J0 574 aa21.28■■□□□ 1
UBXN1-213ENST00000532904 MAP3K11Q16584 847 aa21.27■■□□□ 1
UBXN1-213ENST00000532904 RNF20Q5VTR2 975 aa21.27■■□□□ 1
UBXN1-213ENST00000532904 BLOC1S2Q6QNY1 142 aa21.27■■□□□ 1
UBXN1-213ENST00000532904 BARGINQ6ZT62 677 aa21.27■■□□□ 1
UBXN1-213ENST00000532904 FAM200AQ8TCP9 573 aa21.27■■□□□ 1
UBXN1-213ENST00000532904 NUP62CLQ9H1M0 184 aa21.27■■□□□ 1
UBXN1-213ENST00000532904 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.27■■□□□ 1
UBXN1-213ENST00000532904 JCADQ9P266 1359 aa21.27■■□□□ 1
UBXN1-213ENST00000532904 MED23Q9ULK4 1368 aa21.27■■□□□ 1
UBXN1-213ENST00000532904 GOLGA6L6A8MZA4 724 aa21.27■□□□□ 0.99
UBXN1-213ENST00000532904 RPS6KB1P23443 525 aa21.27■□□□□ 0.99
UBXN1-213ENST00000532904 KIF6Q6ZMV9 814 aa21.27■□□□□ 0.99
UBXN1-213ENST00000532904 A0A0D9SFI3 127 aa21.26■□□□□ 0.99
UBXN1-213ENST00000532904 LIG1P18858 919 aa21.26■□□□□ 0.99
UBXN1-213ENST00000532904 DDB1Q16531 1140 aa21.26■□□□□ 0.99
UBXN1-213ENST00000532904 CCDC8Q9H0W5 538 aaPredicted RBP21.26■□□□□ 0.99
UBXN1-213ENST00000532904 SIL1Q9H173 461 aa21.26■□□□□ 0.99
UBXN1-213ENST00000532904 COL9A3Q14050 684 aaPredicted RBP21.25■□□□□ 0.99
UBXN1-213ENST00000532904 LMBR1LQ6UX01 489 aa21.25■□□□□ 0.99
UBXN1-213ENST00000532904 JARID2Q92833 1246 aaPredicted RBP21.25■□□□□ 0.99
UBXN1-213ENST00000532904 PYCARDQ9ULZ3 195 aa21.25■□□□□ 0.99
UBXN1-213ENST00000532904 MRVI1Q9Y6F6 885 aa21.25■□□□□ 0.99
UBXN1-213ENST00000532904 CYP19A1P11511 503 aaPredicted RBP21.25■□□□□ 0.99
UBXN1-213ENST00000532904 TYRO3Q06418 890 aa21.25■□□□□ 0.99
UBXN1-213ENST00000532904 TSGA10IPQ3SY00 556 aa21.25■□□□□ 0.99
UBXN1-213ENST00000532904 KLHDC4Q8TBB5 520 aa21.25■□□□□ 0.99
UBXN1-213ENST00000532904 SCAND2PQ9GZW5 306 aaPredicted RBP21.25■□□□□ 0.99
UBXN1-213ENST00000532904 CICQ96RK0 1608 aaPredicted RBP21.25■□□□□ 0.99
UBXN1-213ENST00000532904 ANKRD36CQ5JPF3 1778 aa21.24■□□□□ 0.99
UBXN1-213ENST00000532904 TOB2Q14106 344 aaPredicted RBP21.24■□□□□ 0.99
UBXN1-213ENST00000532904 FERMT3Q86UX7 667 aa21.24■□□□□ 0.99
UBXN1-213ENST00000532904 ZNF710Q8N1W2 664 aa21.24■□□□□ 0.99
UBXN1-213ENST00000532904 FSD1Q9BTV5 496 aa21.24■□□□□ 0.99
UBXN1-213ENST00000532904 CCDC94Q9BW85 323 aaPredicted RBP21.24■□□□□ 0.99
UBXN1-213ENST00000532904 TLR7Q9NYK1 1049 aaKnown RBP21.24■□□□□ 0.99
UBXN1-213ENST00000532904 HMG20BQ9P0W2 317 aa21.24■□□□□ 0.99
UBXN1-213ENST00000532904 MAP3K15Q6ZN16 1313 aa21.24■□□□□ 0.99
UBXN1-213ENST00000532904 SLC4A9Q96Q91 983 aa21.24■□□□□ 0.99
UBXN1-213ENST00000532904 FAM173BQ6P4H8 233 aa21.23■□□□□ 0.99
UBXN1-213ENST00000532904 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
UBXN1-213ENST00000532904 BOLA2Q9H3K6 86 aa21.23■□□□□ 0.99
UBXN1-213ENST00000532904 KIF3AQ9Y496 699 aa21.23■□□□□ 0.99
UBXN1-213ENST00000532904 GIGYF2Q6Y7W6 1299 aaKnown RBP21.22■□□□□ 0.99
UBXN1-213ENST00000532904 RBM43Q6ZSC3 357 aaKnown RBP21.22■□□□□ 0.99
UBXN1-213ENST00000532904 SPC24Q8NBT2 197 aa21.22■□□□□ 0.99
UBXN1-213ENST00000532904 DDX19AQ9NUU7 478 aaKnown RBP21.22■□□□□ 0.99
UBXN1-213ENST00000532904 PIP4K2BP78356 416 aa21.22■□□□□ 0.99
UBXN1-213ENST00000532904 HSP90AB3PQ58FF7 597 aa21.22■□□□□ 0.99
UBXN1-213ENST00000532904 PLA2G12BQ9BX93 195 aa21.22■□□□□ 0.99
UBXN1-213ENST00000532904 TAF6LQ9Y6J9 622 aa21.22■□□□□ 0.99
UBXN1-213ENST00000532904 PCCAP05165 728 aaPredicted RBP21.21■□□□□ 0.99
UBXN1-213ENST00000532904 TNNI3KQ59H18 835 aa21.21■□□□□ 0.99
UBXN1-213ENST00000532904 SMAP1Q8IYB5 467 aaPredicted RBP21.21■□□□□ 0.99
UBXN1-213ENST00000532904 TSC1Q92574 1164 aa21.21■□□□□ 0.99
UBXN1-213ENST00000532904 SPATA32Q96LK8 384 aa21.21■□□□□ 0.99
UBXN1-213ENST00000532904 TNMDQ9H2S6 317 aa21.21■□□□□ 0.99
UBXN1-213ENST00000532904 GPR108Q9NPR9 543 aa21.21■□□□□ 0.99
UBXN1-213ENST00000532904 FPGT-TNNI3KV9GXZ4 949 aa21.21■□□□□ 0.99
UBXN1-213ENST00000532904 NUTM2BA6NNL0 878 aaPredicted RBP21.2■□□□□ 0.99
UBXN1-213ENST00000532904 NUTM2EB1AL46 878 aaPredicted RBP21.2■□□□□ 0.99
UBXN1-213ENST00000532904 CAMK4Q16566 473 aa21.2■□□□□ 0.99
UBXN1-213ENST00000532904 USPL1Q5W0Q7 1092 aa21.2■□□□□ 0.99
UBXN1-213ENST00000532904 NUTM2AQ8IVF1 878 aaPredicted RBP21.2■□□□□ 0.99
UBXN1-213ENST00000532904 LEO1Q8WVC0 666 aaPredicted RBP21.2■□□□□ 0.99
UBXN1-213ENST00000532904 TCEANC2Q96MN5 208 aa21.2■□□□□ 0.99
UBXN1-213ENST00000532904 DACT1Q9NYF0 836 aa21.2■□□□□ 0.99
UBXN1-213ENST00000532904 TFCP2Q12800 502 aa21.2■□□□□ 0.98
UBXN1-213ENST00000532904 ZNF589Q86UQ0 364 aaPredicted RBP21.2■□□□□ 0.98
UBXN1-213ENST00000532904 SYTL4Q96C24 671 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms