RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 DNAI1Q9UI46 699 aa8.64□□□□□ -1.03
CTNND1-233ENST00000532787 ALDH3A1P30838 453 aa8.64□□□□□ -1.03
CTNND1-233ENST00000532787 DNA2P51530 1060 aa8.64□□□□□ -1.03
CTNND1-233ENST00000532787 GNAT2P19087 354 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 PAXIP1Q6ZW49 1069 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-233ENST00000532787 CROCCP2Q86T23 111 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 SMC5Q8IY18 1101 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 RPGRQ92834 1020 aaKnown RBP8.63□□□□□ -1.03
CTNND1-233ENST00000532787 MAP3K2Q9Y2U5 619 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 NUP160Q12769 1436 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 WASLO00401 505 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-233ENST00000532787 SYT1P21579 422 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 TRIM14Q14142 442 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 USP48Q86UV5 1035 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 RHPN1Q8TCX5 695 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 ALG1Q9BT22 464 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 ANAPC4Q9UJX5 808 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 COMMD10Q9Y6G5 202 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 RTL1A6NKG5 1358 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 ATP2A2P16615 1042 aaKnown RBP8.63□□□□□ -1.03
CTNND1-233ENST00000532787 TNNC1P63316 161 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 CCDC186Q7Z3E2 898 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 MTRF1LQ9UGC7 380 aaKnown RBP8.63□□□□□ -1.03
CTNND1-233ENST00000532787 PCF11O94913 1555 aaKnown RBP8.63□□□□□ -1.03
CTNND1-233ENST00000532787 RTN1Q16799 776 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 MCMDC2Q4G0Z9 681 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 GIMAP6Q6P9H5 292 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 ANKRD44Q8N8A2 993 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 MSANTD4Q8NCY6 345 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 CCDC110Q8TBZ0 833 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 SNAPC4Q5SXM2 1469 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 KLF18A0A0U1RQI7 1052 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 MYO1BO43795 1136 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 SEPT6Q14141 434 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 HDXQ7Z353 690 aa8.63□□□□□ -1.03
CTNND1-233ENST00000532787 DDX23Q9BUQ8 820 aaKnown RBP8.63□□□□□ -1.03
CTNND1-233ENST00000532787 ABCC5O15440 1437 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 VAV2P52735 878 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 TTC31Q49AM3 519 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-233ENST00000532787 IFNL2Q8IZJ0 200 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 OTUD6BQ8N6M0 293 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 ASXL1Q8IXJ9 1541 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 NOL3O60936 208 aaKnown RBP8.62□□□□□ -1.03
CTNND1-233ENST00000532787 RAB3GAP1Q15042 981 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 MICU3Q86XE3 530 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 CNGA4Q8IV77 575 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 RSPH14Q9UHP6 348 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 SPDYE4A6NLX3 237 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 F6X3S4 739 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 THUMPD2Q9BTF0 503 aaKnown RBP8.62□□□□□ -1.03
CTNND1-233ENST00000532787 GDPD2Q9HCC8 539 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 MIS18AQ9NYP9 233 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 NPHP3Q7Z494 1330 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 CAPN2P17655 700 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 MXRA7P84157 204 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 SETDB1Q15047 1291 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 B4GALNT4Q76KP1 1039 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 NAP1L3Q99457 506 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-233ENST00000532787 TMX1Q9H3N1 280 aa8.62□□□□□ -1.03
CTNND1-233ENST00000532787 CPSF2Q9P2I0 782 aaKnown RBP8.62□□□□□ -1.03
CTNND1-233ENST00000532787 C11orf95C9JLR9 678 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-233ENST00000532787 SNRPA1P09661 255 aaKnown RBP8.61□□□□□ -1.03
CTNND1-233ENST00000532787 SDSP20132 328 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 CLUL1Q15846 466 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 LDHAL6AQ6ZMR3 332 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 BICDL1Q6ZP65 573 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 ATRIPQ8WXE1 791 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 MBIPQ9NS73 344 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 SAMD15Q9P1V8 674 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 LIG1P18858 919 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 PDE1AP54750 535 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 SARNPP82979 210 aaKnown RBP8.61□□□□□ -1.03
CTNND1-233ENST00000532787 TYRO3Q06418 890 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 AOPEPQ8N6M6 819 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 RAB3IL1Q8TBN0 382 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 RSRC1Q96IZ7 334 aaKnown RBP8.61□□□□□ -1.03
CTNND1-233ENST00000532787 TRIM75PA6NK02 468 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 NDC80O14777 642 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 SPTLC2O15270 562 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 ATP8B2P98198 1209 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 CCDC152Q4G0S7 254 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 IFIT1BQ5T764 474 aaKnown RBP8.61□□□□□ -1.03
CTNND1-233ENST00000532787 CCDC50Q8IVM0 306 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 CCDC85AQ96PX6 553 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-233ENST00000532787 STIM2Q9P246 746 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 CNPY2Q9Y2B0 182 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 FAM76AQ8TAV0 307 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 BRF1Q92994 677 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 IFT74Q96LB3 600 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 SWAP70Q9UH65 585 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 PHF8Q9UPP1 1060 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 SETSIPP0DME0 302 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 XRCC6P12956 609 aaKnown RBP eCLIP8.61□□□□□ -1.032e-8■□□□□ 8.5
CTNND1-233ENST00000532787 IL15P40933 162 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-233ENST00000532787 TERF1P54274 439 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 CCDC14Q49A88 953 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 VWA3BQ502W6 1294 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 SMAP1Q8IYB5 467 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-233ENST00000532787 NEK11Q8NG66 645 aa8.61□□□□□ -1.03
CTNND1-233ENST00000532787 ERO1AQ96HE7 468 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 194.7 ms