RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 MYD88Q99836 296 aa22.22■■□□□ 1.15
CTSB-226ENST00000532656 APAF1O14727 1248 aa22.21■■□□□ 1.15
CTSB-226ENST00000532656 RPS12P25398 132 aaKnown RBP22.21■■□□□ 1.15
CTSB-226ENST00000532656 BRPF1P55201 1214 aaPredicted RBP22.21■■□□□ 1.15
CTSB-226ENST00000532656 HUNKP57058 714 aa22.21■■□□□ 1.15
CTSB-226ENST00000532656 KRT26Q7Z3Y9 468 aa22.21■■□□□ 1.15
CTSB-226ENST00000532656 SCN9AQ15858 1988 aa22.2■■□□□ 1.14
CTSB-226ENST00000532656 CA12O43570 354 aa22.2■■□□□ 1.14
CTSB-226ENST00000532656 JARID2Q92833 1246 aaPredicted RBP22.2■■□□□ 1.14
CTSB-226ENST00000532656 IFT57Q9NWB7 429 aa22.2■■□□□ 1.14
CTSB-226ENST00000532656 POLR2AP24928 1970 aaKnown RBP22.19■■□□□ 1.14
CTSB-226ENST00000532656 CCDC85CA6NKD9 419 aa22.19■■□□□ 1.14
CTSB-226ENST00000532656 ADM5C9JUS6 153 aa22.19■■□□□ 1.14
CTSB-226ENST00000532656 UFL1O94874 794 aa22.19■■□□□ 1.14
CTSB-226ENST00000532656 GNAI1P63096 354 aa22.19■■□□□ 1.14
CTSB-226ENST00000532656 ZIC5Q96T25 663 aa22.19■■□□□ 1.14
CTSB-226ENST00000532656 ZC3H12CQ9C0D7 883 aaKnown RBP22.19■■□□□ 1.14
CTSB-226ENST00000532656 PRKRIP1Q9H875 184 aaPredicted RBP22.19■■□□□ 1.14
CTSB-226ENST00000532656 ANKIB1Q9P2G1 1089 aa22.19■■□□□ 1.14
CTSB-226ENST00000532656 G3V3G9 751 aa22.18■■□□□ 1.14
CTSB-226ENST00000532656 NOGQ13253 232 aa22.18■■□□□ 1.14
CTSB-226ENST00000532656 KIF4BQ2VIQ3 1234 aa22.18■■□□□ 1.14
CTSB-226ENST00000532656 DCAF8Q5TAQ9 597 aa22.18■■□□□ 1.14
CTSB-226ENST00000532656 DCPSQ96C86 337 aaKnown RBP22.18■■□□□ 1.14
CTSB-226ENST00000532656 CCDC85AQ96PX6 553 aaPredicted RBP22.18■■□□□ 1.14
CTSB-226ENST00000532656 PODXL2Q9NZ53 605 aa22.18■■□□□ 1.14
CTSB-226ENST00000532656 CASP8AP2Q9UKL3 1982 aa22.18■■□□□ 1.14
CTSB-226ENST00000532656 PCCAP05165 728 aaPredicted RBP22.17■■□□□ 1.14
CTSB-226ENST00000532656 HSP90B1P14625 803 aaKnown RBP22.17■■□□□ 1.14
CTSB-226ENST00000532656 FAM161AQ3B820 660 aa22.17■■□□□ 1.14
CTSB-226ENST00000532656 CCDC152Q4G0S7 254 aa22.17■■□□□ 1.14
CTSB-226ENST00000532656 C8orf58Q8NAV2 365 aa22.17■■□□□ 1.14
CTSB-226ENST00000532656 CCDC191Q8NCU4 936 aa22.17■■□□□ 1.14
CTSB-226ENST00000532656 GGA1Q9UJY5 639 aa22.17■■□□□ 1.14
CTSB-226ENST00000532656 PDE8AO60658 829 aa22.16■■□□□ 1.14
CTSB-226ENST00000532656 VIL1P09327 827 aaKnown RBP22.16■■□□□ 1.14
CTSB-226ENST00000532656 CALD1Q05682 793 aaKnown RBP22.16■■□□□ 1.14
CTSB-226ENST00000532656 GBA2Q9HCG7 927 aaPredicted RBP22.16■■□□□ 1.14
CTSB-226ENST00000532656 CWC25Q9NXE8 425 aaPredicted RBP22.16■■□□□ 1.14
CTSB-226ENST00000532656 GGA3Q9NZ52 723 aa22.16■■□□□ 1.14
CTSB-226ENST00000532656 ASTN2O75129 1339 aaPredicted RBP22.15■■□□□ 1.14
CTSB-226ENST00000532656 C2orf69Q8N8R5 385 aa22.15■■□□□ 1.14
CTSB-226ENST00000532656 RGMBQ6NW40 437 aa22.14■■□□□ 1.13
CTSB-226ENST00000532656 METTL22Q9BUU2 404 aaPredicted RBP22.14■■□□□ 1.13
CTSB-226ENST00000532656 DDX58O95786 925 aaKnown RBP22.13■■□□□ 1.13
CTSB-226ENST00000532656 CCDC30Q5VVM6 783 aa22.13■■□□□ 1.13
CTSB-226ENST00000532656 MCOLN1Q9GZU1 580 aa22.13■■□□□ 1.13
CTSB-226ENST00000532656 FAM155AB1AL88 458 aaPredicted RBP22.12■■□□□ 1.13
CTSB-226ENST00000532656 ANKRD18AQ8IVF6 992 aa22.12■■□□□ 1.13
CTSB-226ENST00000532656 SULF1Q8IWU6 871 aa22.12■■□□□ 1.13
CTSB-226ENST00000532656 TSPYL6Q8N831 410 aa22.12■■□□□ 1.13
CTSB-226ENST00000532656 MAP3K2Q9Y2U5 619 aa22.12■■□□□ 1.13
CTSB-226ENST00000532656 XDHP47989 1333 aa22.11■■□□□ 1.13
CTSB-226ENST00000532656 PSME4Q14997 1843 aa22.11■■□□□ 1.13
CTSB-226ENST00000532656 ZNF157P51786 506 aaPredicted RBP22.11■■□□□ 1.13
CTSB-226ENST00000532656 RSBN1LQ6PCB5 846 aaPredicted RBP22.11■■□□□ 1.13
CTSB-226ENST00000532656 SPEF2Q9C093 1822 aa22.09■■□□□ 1.13
CTSB-226ENST00000532656 CTSWP56202 376 aa22.09■■□□□ 1.13
CTSB-226ENST00000532656 ZNF280AP59817 542 aaPredicted RBP22.09■■□□□ 1.13
CTSB-226ENST00000532656 KIF23Q02241 960 aaPredicted RBP22.09■■□□□ 1.13
CTSB-226ENST00000532656 DGKZQ13574 1117 aa22.09■■□□□ 1.13
CTSB-226ENST00000532656 SCARF1Q14162 830 aa22.09■■□□□ 1.13
CTSB-226ENST00000532656 ANGEL2Q5VTE6 544 aaKnown RBP22.09■■□□□ 1.13
CTSB-226ENST00000532656 AGBL3Q8NEM8 1001 aa22.09■■□□□ 1.13
CTSB-226ENST00000532656 CCDC102AQ96A19 550 aa22.09■■□□□ 1.13
CTSB-226ENST00000532656 CDCA5Q96FF9 252 aa22.09■■□□□ 1.13
CTSB-226ENST00000532656 ZNF609O15014 1411 aa22.08■■□□□ 1.13
CTSB-226ENST00000532656 PI4KAP2A4QPH2 592 aa22.08■■□□□ 1.13
CTSB-226ENST00000532656 WTIPA6NIX2 430 aaPredicted RBP22.08■■□□□ 1.13
CTSB-226ENST00000532656 IGKV5-2P06315 115 aa22.08■■□□□ 1.13
CTSB-226ENST00000532656 ATP2B4P23634 1241 aa22.08■■□□□ 1.13
CTSB-226ENST00000532656 PI4KAP1Q8N8J0 262 aa22.08■■□□□ 1.13
CTSB-226ENST00000532656 TSR2Q969E8 191 aaKnown RBP22.08■■□□□ 1.13
CTSB-226ENST00000532656 MLLT1Q03111 559 aaPredicted RBP22.07■■□□□ 1.12
CTSB-226ENST00000532656 KSR2Q6VAB6 950 aa22.07■■□□□ 1.12
CTSB-226ENST00000532656 GMLQ99445 158 aa22.07■■□□□ 1.12
CTSB-226ENST00000532656 CDC5LQ99459 802 aaKnown RBP22.07■■□□□ 1.12
CTSB-226ENST00000532656 CHMP4AQ9BY43 222 aa22.07■■□□□ 1.12
CTSB-226ENST00000532656 MYH3P11055 1940 aa22.06■■□□□ 1.12
CTSB-226ENST00000532656 SLC10A3P09131 477 aa22.06■■□□□ 1.12
CTSB-226ENST00000532656 MYOZ2Q9NPC6 264 aa22.06■■□□□ 1.12
CTSB-226ENST00000532656 USP17L3A6NCW0 530 aa22.05■■□□□ 1.12
CTSB-226ENST00000532656 USP17L4A6NCW7 530 aa22.05■■□□□ 1.12
CTSB-226ENST00000532656 USP17L8P0C7I0 530 aa22.05■■□□□ 1.12
CTSB-226ENST00000532656 RGS19P49795 217 aa22.05■■□□□ 1.12
CTSB-226ENST00000532656 CWF19L2Q2TBE0 894 aaKnown RBP22.05■■□□□ 1.12
CTSB-226ENST00000532656 USP17L1Q7RTZ2 530 aa22.05■■□□□ 1.12
CTSB-226ENST00000532656 TTLL11Q8NHH1 800 aa22.05■■□□□ 1.12
CTSB-226ENST00000532656 GREM2Q9H772 168 aa22.05■■□□□ 1.12
CTSB-226ENST00000532656 SCAF8Q9UPN6 1271 aaKnown RBP22.05■■□□□ 1.12
CTSB-226ENST00000532656 TRPA1O75762 1119 aa22.04■■□□□ 1.12
CTSB-226ENST00000532656 NEXNQ0ZGT2 675 aa22.04■■□□□ 1.12
CTSB-226ENST00000532656 PODNQ7Z5L7 613 aa22.04■■□□□ 1.12
CTSB-226ENST00000532656 STK31Q9BXU1 1019 aa22.04■■□□□ 1.12
CTSB-226ENST00000532656 SAGE1Q9NXZ1 904 aa22.04■■□□□ 1.12
CTSB-226ENST00000532656 MINPP1Q9UNW1 487 aa22.04■■□□□ 1.12
CTSB-226ENST00000532656 MED23Q9ULK4 1368 aa22.03■■□□□ 1.12
CTSB-226ENST00000532656 BSDC1Q9NW68 430 aaPredicted RBP22.03■■□□□ 1.12
CTSB-226ENST00000532656 RNF186Q9NXI6 227 aa22.03■■□□□ 1.12
CTSB-226ENST00000532656 AKAP11Q9UKA4 1901 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms