RNA–Protein interactions for RNA: ENST00000531749.1

LINC02548-201, Transcript of long intergenic non-protein coding RNA 2548, humanhuman

TSL 3 BASIC

Gene LINC02548, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02548-201ENST00000531749 TRIM28Q13263 835 aaKnown RBP12.45□□□□□ -0.42
LINC02548-201ENST00000531749 TMC4Q7Z404 712 aa12.45□□□□□ -0.42
LINC02548-201ENST00000531749 JARID2Q92833 1246 aaPredicted RBP12.45□□□□□ -0.42
LINC02548-201ENST00000531749 CSRNP1Q96S65 589 aa12.45□□□□□ -0.42
LINC02548-201ENST00000531749 RNF186Q9NXI6 227 aa12.45□□□□□ -0.42
LINC02548-201ENST00000531749 IRS4O14654 1257 aaPredicted RBP12.44□□□□□ -0.42
LINC02548-201ENST00000531749 TRPA1O75762 1119 aa12.44□□□□□ -0.42
LINC02548-201ENST00000531749 HDGFL1Q5TGJ6 251 aa12.44□□□□□ -0.42
LINC02548-201ENST00000531749 CFAP44Q96MT7 982 aa12.44□□□□□ -0.42
LINC02548-201ENST00000531749 PHAXQ9H814 394 aaKnown RBP12.44□□□□□ -0.42
LINC02548-201ENST00000531749 SCAF8Q9UPN6 1271 aaKnown RBP12.44□□□□□ -0.42
LINC02548-201ENST00000531749 AKAP11Q9UKA4 1901 aa12.44□□□□□ -0.42
LINC02548-201ENST00000531749 PDE4DIPQ5VU43 2346 aa12.44□□□□□ -0.42
LINC02548-201ENST00000531749 TNRC18O15417 2968 aaPredicted RBP12.44□□□□□ -0.42
LINC02548-201ENST00000531749 GMLQ99445 158 aa12.43□□□□□ -0.42
LINC02548-201ENST00000531749 PODXL2Q9NZ53 605 aa12.43□□□□□ -0.42
LINC02548-201ENST00000531749 ZNF853P0CG23 659 aa12.42□□□□□ -0.42
LINC02548-201ENST00000531749 RPS12P25398 132 aaKnown RBP12.42□□□□□ -0.42
LINC02548-201ENST00000531749 ZNF157P51786 506 aaPredicted RBP12.42□□□□□ -0.42
LINC02548-201ENST00000531749 KIF4BQ2VIQ3 1234 aa12.42□□□□□ -0.42
LINC02548-201ENST00000531749 DUSP27Q5VZP5 1158 aa12.42□□□□□ -0.42
LINC02548-201ENST00000531749 MOB2Q70IA6 237 aa12.42□□□□□ -0.42
LINC02548-201ENST00000531749 C2orf69Q8N8R5 385 aa12.42□□□□□ -0.42
LINC02548-201ENST00000531749 DCPSQ96C86 337 aaKnown RBP12.42□□□□□ -0.42
LINC02548-201ENST00000531749 CDCA5Q96FF9 252 aa12.42□□□□□ -0.42
LINC02548-201ENST00000531749 DBF4Q9UBU7 674 aaPredicted RBP12.42□□□□□ -0.42
LINC02548-201ENST00000531749 ADAMTS8Q9UP79 889 aa12.42□□□□□ -0.42
LINC02548-201ENST00000531749 SLC10A3P09131 477 aa12.41□□□□□ -0.42
LINC02548-201ENST00000531749 ZNF280AP59817 542 aaPredicted RBP12.41□□□□□ -0.42
LINC02548-201ENST00000531749 LMOD3Q0VAK6 560 aa12.41□□□□□ -0.42
LINC02548-201ENST00000531749 SCARF1Q14162 830 aa12.41□□□□□ -0.42
LINC02548-201ENST00000531749 RALBP1Q15311 655 aa12.41□□□□□ -0.42
LINC02548-201ENST00000531749 CCDC102AQ96A19 550 aa12.41□□□□□ -0.42
LINC02548-201ENST00000531749 RUNDC1Q96C34 613 aa12.41□□□□□ -0.42
LINC02548-201ENST00000531749 MBIPQ9NS73 344 aa12.41□□□□□ -0.42
LINC02548-201ENST00000531749 GGA3Q9NZ52 723 aa12.41□□□□□ -0.42
LINC02548-201ENST00000531749 PSME4Q14997 1843 aa12.41□□□□□ -0.42
LINC02548-201ENST00000531749 ELL2O00472 640 aaPredicted RBP12.4□□□□□ -0.42
LINC02548-201ENST00000531749 HOXB7P09629 217 aa12.4□□□□□ -0.42
LINC02548-201ENST00000531749 SOX10P56693 466 aa12.4□□□□□ -0.42
LINC02548-201ENST00000531749 ANGEL2Q5VTE6 544 aaKnown RBP12.4□□□□□ -0.42
LINC02548-201ENST00000531749 PRAMEF18Q5VWM3 479 aa12.4□□□□□ -0.42
LINC02548-201ENST00000531749 ZBTB38Q8NAP3 1195 aaPredicted RBP12.4□□□□□ -0.42
LINC02548-201ENST00000531749 CCDC85AQ96PX6 553 aaPredicted RBP12.4□□□□□ -0.42
LINC02548-201ENST00000531749 EYA3Q99504 573 aa12.4□□□□□ -0.42
LINC02548-201ENST00000531749 ZC3H12CQ9C0D7 883 aaKnown RBP12.4□□□□□ -0.42
LINC02548-201ENST00000531749 HYPKQ9NX55 129 aa12.4□□□□□ -0.42
LINC02548-201ENST00000531749 UFL1O94874 794 aa12.39□□□□□ -0.43
LINC02548-201ENST00000531749 RSBN1LQ6PCB5 846 aaPredicted RBP12.39□□□□□ -0.43
LINC02548-201ENST00000531749 RASAL3Q86YV0 1011 aa12.39□□□□□ -0.43
LINC02548-201ENST00000531749 MYD88Q99836 296 aa12.39□□□□□ -0.43
LINC02548-201ENST00000531749 MXD3Q9BW11 206 aa12.39□□□□□ -0.43
LINC02548-201ENST00000531749 SAGE1Q9NXZ1 904 aa12.39□□□□□ -0.43
LINC02548-201ENST00000531749 ZNF646O15015 1829 aaPredicted RBP12.39□□□□□ -0.43
LINC02548-201ENST00000531749 PCCAP05165 728 aaPredicted RBP12.38□□□□□ -0.43
LINC02548-201ENST00000531749 RIC3Q7Z5B4 369 aa12.38□□□□□ -0.43
LINC02548-201ENST00000531749 C8orf58Q8NAV2 365 aa12.38□□□□□ -0.43
LINC02548-201ENST00000531749 AGBL3Q8NEM8 1001 aa12.38□□□□□ -0.43
LINC02548-201ENST00000531749 UBE2Q2LH0YL09 131 aa12.37□□□□□ -0.43
LINC02548-201ENST00000531749 DDX10Q13206 875 aaKnown RBP12.37□□□□□ -0.43
LINC02548-201ENST00000531749 NBPF9Q3BBW0 867 aa12.37□□□□□ -0.43
LINC02548-201ENST00000531749 TXNRD3Q86VQ6 643 aa12.37□□□□□ -0.43
LINC02548-201ENST00000531749 SULF1Q8IWU6 871 aa12.37□□□□□ -0.43
LINC02548-201ENST00000531749 R3HDMLQ9H3Y0 253 aa12.37□□□□□ -0.43
LINC02548-201ENST00000531749 ANKIB1Q9P2G1 1089 aa12.37□□□□□ -0.43
LINC02548-201ENST00000531749 GGA1Q9UJY5 639 aa12.37□□□□□ -0.43
LINC02548-201ENST00000531749 PDE8AO60658 829 aa12.36□□□□□ -0.43
LINC02548-201ENST00000531749 MYOZ2Q9NPC6 264 aa12.36□□□□□ -0.43
LINC02548-201ENST00000531749 ZNF609O15014 1411 aa12.36□□□□□ -0.43
LINC02548-201ENST00000531749 MYBBP1AQ9BQG0 1328 aaKnown RBP12.36□□□□□ -0.43
LINC02548-201ENST00000531749 TBC1D8O95759 1140 aa12.35□□□□□ -0.43
LINC02548-201ENST00000531749 IGKV5-2P06315 115 aa12.35□□□□□ -0.43
LINC02548-201ENST00000531749 USP17L8P0C7I0 530 aa12.35□□□□□ -0.43
LINC02548-201ENST00000531749 CTU1Q7Z7A3 348 aaKnown RBP12.35□□□□□ -0.43
LINC02548-201ENST00000531749 TSPYL6Q8N831 410 aa12.35□□□□□ -0.43
LINC02548-201ENST00000531749 CCDC191Q8NCU4 936 aa12.35□□□□□ -0.43
LINC02548-201ENST00000531749 TTLL11Q8NHH1 800 aa12.35□□□□□ -0.43
LINC02548-201ENST00000531749 METTL22Q9BUU2 404 aaPredicted RBP12.35□□□□□ -0.43
LINC02548-201ENST00000531749 APAF1O14727 1248 aa12.34□□□□□ -0.43
LINC02548-201ENST00000531749 CCDC152Q4G0S7 254 aa12.34□□□□□ -0.43
LINC02548-201ENST00000531749 DACT2Q5SW24 774 aa12.34□□□□□ -0.43
LINC02548-201ENST00000531749 PODNQ7Z5L7 613 aa12.34□□□□□ -0.43
LINC02548-201ENST00000531749 MINPP1Q9UNW1 487 aa12.34□□□□□ -0.43
LINC02548-201ENST00000531749 USP17L3A6NCW0 530 aa12.33□□□□□ -0.44
LINC02548-201ENST00000531749 USP17L4A6NCW7 530 aa12.33□□□□□ -0.44
LINC02548-201ENST00000531749 G3V3G9 751 aa12.33□□□□□ -0.44
LINC02548-201ENST00000531749 WNT10BO00744 389 aa12.33□□□□□ -0.44
LINC02548-201ENST00000531749 ATP2B4P23634 1241 aa12.33□□□□□ -0.44
LINC02548-201ENST00000531749 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
LINC02548-201ENST00000531749 USP17L1Q7RTZ2 530 aa12.33□□□□□ -0.44
LINC02548-201ENST00000531749 ANKRD18AQ8IVF6 992 aa12.33□□□□□ -0.44
LINC02548-201ENST00000531749 ZNF296Q8WUU4 475 aaPredicted RBP12.33□□□□□ -0.44
LINC02548-201ENST00000531749 CWC25Q9NXE8 425 aaPredicted RBP12.33□□□□□ -0.44
LINC02548-201ENST00000531749 FZD1Q9UP38 647 aa12.33□□□□□ -0.44
LINC02548-201ENST00000531749 HPS5Q9UPZ3 1129 aa12.33□□□□□ -0.44
LINC02548-201ENST00000531749 XDHP47989 1333 aa12.33□□□□□ -0.44
LINC02548-201ENST00000531749 PITPNM2Q9BZ72 1349 aa12.33□□□□□ -0.44
LINC02548-201ENST00000531749 PAPPA2Q9BXP8 1791 aa12.33□□□□□ -0.44
LINC02548-201ENST00000531749 SPEF2Q9C093 1822 aa12.32□□□□□ -0.44
LINC02548-201ENST00000531749 KLRK1P26718 216 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms