RNA–Protein interactions for RNA: ENST00000531484.5

RELA-217, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 2

Gene RELA, Length 2,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-217ENST00000531484 CBX1P83916 185 aa12.4□□□□□ -0.42
RELA-217ENST00000531484 DNTTIP2Q5QJE6 756 aaKnown RBP12.4□□□□□ -0.42
RELA-217ENST00000531484 ZBTB3Q9H5J0 574 aa12.4□□□□□ -0.42
RELA-217ENST00000531484 BRD1O95696 1058 aa12.39□□□□□ -0.43
RELA-217ENST00000531484 EN1Q05925 392 aaPredicted RBP12.39□□□□□ -0.43
RELA-217ENST00000531484 ATP2B3Q16720 1220 aa12.39□□□□□ -0.43
RELA-217ENST00000531484 PIBF1Q8WXW3 757 aa12.39□□□□□ -0.43
RELA-217ENST00000531484 EAF2Q96CJ1 260 aaPredicted RBP12.39□□□□□ -0.43
RELA-217ENST00000531484 TBC1D2BQ9UPU7 963 aa12.39□□□□□ -0.43
RELA-217ENST00000531484 HIP1O00291 1037 aa12.39□□□□□ -0.43
RELA-217ENST00000531484 HMGN5P82970 282 aaKnown RBP12.39□□□□□ -0.43
RELA-217ENST00000531484 MPNDQ8N594 471 aa12.39□□□□□ -0.43
RELA-217ENST00000531484 GTPBP4Q9BZE4 634 aaKnown RBP12.39□□□□□ -0.43
RELA-217ENST00000531484 UTRNP46939 3433 aa12.38□□□□□ -0.43
RELA-217ENST00000531484 FAM177BA6PVY3 158 aa12.38□□□□□ -0.43
RELA-217ENST00000531484 RASEFQ8IZ41 740 aa12.38□□□□□ -0.43
RELA-217ENST00000531484 KLHDC4Q8TBB5 520 aa12.38□□□□□ -0.43
RELA-217ENST00000531484 ZNF830Q96NB3 372 aaPredicted RBP12.38□□□□□ -0.43
RELA-217ENST00000531484 CCDC8Q9H0W5 538 aaPredicted RBP12.38□□□□□ -0.43
RELA-217ENST00000531484 NOLC1Q14978 699 aaKnown RBP eCLIP12.37□□□□□ -0.43
RELA-217ENST00000531484 EZH2Q15910 746 aaKnown RBP12.37□□□□□ -0.43
RELA-217ENST00000531484 SMARCC1Q92922 1105 aaPredicted RBP12.37□□□□□ -0.43
RELA-217ENST00000531484 TTC14Q96N46 770 aa12.37□□□□□ -0.43
RELA-217ENST00000531484 TLR7Q9NYK1 1049 aaKnown RBP12.37□□□□□ -0.43
RELA-217ENST00000531484 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.37□□□□□ -0.43
RELA-217ENST00000531484 TCHHQ07283 1943 aa12.37□□□□□ -0.43
RELA-217ENST00000531484 ATP5J2-PTCD1G3V325 749 aa12.37□□□□□ -0.43
RELA-217ENST00000531484 PHF14O94880 888 aa12.37□□□□□ -0.43
RELA-217ENST00000531484 STARD3NLO95772 234 aa12.37□□□□□ -0.43
RELA-217ENST00000531484 CASTP20810 708 aaKnown RBP12.37□□□□□ -0.43
RELA-217ENST00000531484 FGD1P98174 961 aa12.37□□□□□ -0.43
RELA-217ENST00000531484 HLFQ16534 295 aa12.37□□□□□ -0.43
RELA-217ENST00000531484 TXNRD1Q16881 649 aa12.37□□□□□ -0.43
RELA-217ENST00000531484 EPHA10Q5JZY3 1008 aa12.37□□□□□ -0.43
RELA-217ENST00000531484 PPP4R3BQ5MIZ7 849 aa12.37□□□□□ -0.43
RELA-217ENST00000531484 UBE3BQ7Z3V4 1068 aa12.37□□□□□ -0.43
RELA-217ENST00000531484 C17orf53Q8N3J3 647 aaPredicted RBP12.37□□□□□ -0.43
RELA-217ENST00000531484 COL15A1P39059 1388 aa12.37□□□□□ -0.43
RELA-217ENST00000531484 CCDC171Q6TFL3 1326 aa12.37□□□□□ -0.43
RELA-217ENST00000531484 AK2P54819 239 aa12.36□□□□□ -0.43
RELA-217ENST00000531484 PTH1RQ03431 593 aa12.36□□□□□ -0.43
RELA-217ENST00000531484 PRPF40BQ6NWY9 871 aaKnown RBP12.36□□□□□ -0.43
RELA-217ENST00000531484 FSD1Q9BTV5 496 aa12.36□□□□□ -0.43
RELA-217ENST00000531484 WDR33Q9C0J8 1336 aaKnown RBP12.36□□□□□ -0.43
RELA-217ENST00000531484 ILDR2Q71H61 639 aa12.36□□□□□ -0.43
RELA-217ENST00000531484 PLBD2Q8NHP8 589 aa12.36□□□□□ -0.43
RELA-217ENST00000531484 COPRSQ9NQ92 184 aa12.36□□□□□ -0.43
RELA-217ENST00000531484 CCDC87Q9NVE4 849 aa12.36□□□□□ -0.43
RELA-217ENST00000531484 LIMCH1Q9UPQ0 1083 aa12.36□□□□□ -0.43
RELA-217ENST00000531484 KIF20AO95235 890 aa12.35□□□□□ -0.43
RELA-217ENST00000531484 NMIQ13287 307 aaPredicted RBP12.35□□□□□ -0.43
RELA-217ENST00000531484 JAKMIP1Q96N16 626 aaKnown RBP12.35□□□□□ -0.43
RELA-217ENST00000531484 BOLA2Q9H3K6 86 aa12.35□□□□□ -0.43
RELA-217ENST00000531484 BCL2L12Q9HB09 334 aa12.35□□□□□ -0.43
RELA-217ENST00000531484 SPTLC3Q9NUV7 552 aa12.35□□□□□ -0.43
RELA-217ENST00000531484 A0A087WZG4 1122 aa12.35□□□□□ -0.43
RELA-217ENST00000531484 GNPATO15228 680 aa12.35□□□□□ -0.43
RELA-217ENST00000531484 ZKSCAN1P17029 563 aaPredicted RBP12.35□□□□□ -0.43
RELA-217ENST00000531484 KCNJ4P48050 445 aa12.35□□□□□ -0.43
RELA-217ENST00000531484 ZNF827Q17R98 1081 aa12.35□□□□□ -0.43
RELA-217ENST00000531484 RABL6Q3YEC7 729 aaPredicted RBP12.35□□□□□ -0.43
RELA-217ENST00000531484 FAM227BQ96M60 508 aa12.35□□□□□ -0.43
RELA-217ENST00000531484 TTC12Q9H892 705 aaPredicted RBP12.35□□□□□ -0.43
RELA-217ENST00000531484 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
RELA-217ENST00000531484 KIF3AQ9Y496 699 aa12.35□□□□□ -0.43
RELA-217ENST00000531484 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.35□□□□□ -0.43
RELA-217ENST00000531484 LY75O60449 1722 aa12.34□□□□□ -0.43
RELA-217ENST00000531484 RPAP1Q9BWH6 1393 aaPredicted RBP12.34□□□□□ -0.43
RELA-217ENST00000531484 RUFY3Q7L099 469 aa12.34□□□□□ -0.43
RELA-217ENST00000531484 USP25Q9UHP3 1055 aa12.34□□□□□ -0.43
RELA-217ENST00000531484 TNS1Q9HBL0 1735 aaKnown RBP12.34□□□□□ -0.43
RELA-217ENST00000531484 GADD45BO75293 160 aaPredicted RBP12.34□□□□□ -0.43
RELA-217ENST00000531484 LETM1O95202 739 aaPredicted RBP12.34□□□□□ -0.43
RELA-217ENST00000531484 CPA1P15085 419 aa12.34□□□□□ -0.43
RELA-217ENST00000531484 RFX5P48382 616 aaPredicted RBP12.34□□□□□ -0.43
RELA-217ENST00000531484 EIF5P55010 431 aaKnown RBP12.34□□□□□ -0.43
RELA-217ENST00000531484 TM6SF1Q9BZW5 370 aa12.34□□□□□ -0.43
RELA-217ENST00000531484 RBM8AQ9Y5S9 174 aaKnown RBP12.34□□□□□ -0.43
RELA-217ENST00000531484 CYP46A1Q9Y6A2 500 aa12.34□□□□□ -0.43
RELA-217ENST00000531484 MED23Q9ULK4 1368 aa12.33□□□□□ -0.44
RELA-217ENST00000531484 COL5A3P25940 1745 aaPredicted RBP12.33□□□□□ -0.44
RELA-217ENST00000531484 A0A0D9SFI3 127 aa12.33□□□□□ -0.44
RELA-217ENST00000531484 PTPN12Q05209 780 aaKnown RBP12.33□□□□□ -0.44
RELA-217ENST00000531484 TNNI3KQ59H18 835 aa12.33□□□□□ -0.44
RELA-217ENST00000531484 VPS53Q5VIR6 699 aa12.33□□□□□ -0.44
RELA-217ENST00000531484 SYNE4Q8N205 404 aa12.33□□□□□ -0.44
RELA-217ENST00000531484 KCNB2Q92953 911 aa12.33□□□□□ -0.44
RELA-217ENST00000531484 SYAP1Q96A49 352 aaPredicted RBP12.33□□□□□ -0.44
RELA-217ENST00000531484 TEX13AQ9BXU3 409 aaPredicted RBP12.33□□□□□ -0.44
RELA-217ENST00000531484 PDGFDQ9GZP0 370 aaPredicted RBP12.33□□□□□ -0.44
RELA-217ENST00000531484 PDRG1Q9NUG6 133 aa12.33□□□□□ -0.44
RELA-217ENST00000531484 FPGT-TNNI3KV9GXZ4 949 aa12.33□□□□□ -0.44
RELA-217ENST00000531484 GPTP24298 496 aa12.32□□□□□ -0.44
RELA-217ENST00000531484 TFCP2Q12800 502 aa12.32□□□□□ -0.44
RELA-217ENST00000531484 NECTIN1Q15223 517 aa12.32□□□□□ -0.44
RELA-217ENST00000531484 UVSSAQ2YD98 709 aa12.32□□□□□ -0.44
RELA-217ENST00000531484 ADCK5Q3MIX3 580 aa12.32□□□□□ -0.44
RELA-217ENST00000531484 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
RELA-217ENST00000531484 SNRKQ9NRH2 765 aa12.32□□□□□ -0.44
RELA-217ENST00000531484 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms