RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 CCDC152Q4G0S7 254 aa16.52■□□□□ 0.24
TM9SF1-211ENST00000531406 SAPCD2Q86UD0 394 aa16.52■□□□□ 0.24
TM9SF1-211ENST00000531406 TSPYL6Q8N831 410 aa16.52■□□□□ 0.24
TM9SF1-211ENST00000531406 ZC3H12CQ9C0D7 883 aaKnown RBP16.52■□□□□ 0.24
TM9SF1-211ENST00000531406 PODXL2Q9NZ53 605 aa16.52■□□□□ 0.24
TM9SF1-211ENST00000531406 PDE8AO60658 829 aa16.51■□□□□ 0.23
TM9SF1-211ENST00000531406 RPS12P25398 132 aaKnown RBP16.51■□□□□ 0.23
TM9SF1-211ENST00000531406 CCDC184Q52MB2 194 aa16.51■□□□□ 0.23
TM9SF1-211ENST00000531406 SAMD7Q7Z3H4 446 aa16.51■□□□□ 0.23
TM9SF1-211ENST00000531406 USP48Q86UV5 1035 aa16.51■□□□□ 0.23
TM9SF1-211ENST00000531406 RTL9Q8NET4 1388 aa16.51■□□□□ 0.23
TM9SF1-211ENST00000531406 AOC2O75106 756 aa16.5■□□□□ 0.23
TM9SF1-211ENST00000531406 UFL1O94874 794 aa16.5■□□□□ 0.23
TM9SF1-211ENST00000531406 MAP2K2P36507 400 aa16.5■□□□□ 0.23
TM9SF1-211ENST00000531406 TBC1D10BQ4KMP7 808 aaPredicted RBP16.5■□□□□ 0.23
TM9SF1-211ENST00000531406 CCDC85AQ96PX6 553 aaPredicted RBP16.5■□□□□ 0.23
TM9SF1-211ENST00000531406 ZNF408Q9H9D4 720 aa16.5■□□□□ 0.23
TM9SF1-211ENST00000531406 ANKIB1Q9P2G1 1089 aa16.5■□□□□ 0.23
TM9SF1-211ENST00000531406 GGA1Q9UJY5 639 aa16.5■□□□□ 0.23
TM9SF1-211ENST00000531406 MAP3K2Q9Y2U5 619 aa16.5■□□□□ 0.23
TM9SF1-211ENST00000531406 EGFRP00533 1210 aa16.49■□□□□ 0.23
TM9SF1-211ENST00000531406 TAF1P21675 1872 aa16.49■□□□□ 0.23
TM9SF1-211ENST00000531406 CCDC27Q2M243 656 aa16.49■□□□□ 0.23
TM9SF1-211ENST00000531406 KSR2Q6VAB6 950 aa16.49■□□□□ 0.23
TM9SF1-211ENST00000531406 TSR2Q969E8 191 aaKnown RBP16.49■□□□□ 0.23
TM9SF1-211ENST00000531406 HHIPL1Q96JK4 782 aa16.49■□□□□ 0.23
TM9SF1-211ENST00000531406 BEGAINQ9BUH8 593 aa16.49■□□□□ 0.23
TM9SF1-211ENST00000531406 PI4KAP2A4QPH2 592 aa16.48■□□□□ 0.23
TM9SF1-211ENST00000531406 G3V3G9 751 aa16.48■□□□□ 0.23
TM9SF1-211ENST00000531406 IGKV5-2P06315 115 aa16.48■□□□□ 0.23
TM9SF1-211ENST00000531406 VIL1P09327 827 aaKnown RBP16.48■□□□□ 0.23
TM9SF1-211ENST00000531406 RBM26Q5T8P6 1007 aaKnown RBP16.48■□□□□ 0.23
TM9SF1-211ENST00000531406 DCAF8Q5TAQ9 597 aa16.48■□□□□ 0.23
TM9SF1-211ENST00000531406 DLK2Q6UY11 383 aa16.48■□□□□ 0.23
TM9SF1-211ENST00000531406 PI4KAP1Q8N8J0 262 aa16.48■□□□□ 0.23
TM9SF1-211ENST00000531406 KRT26Q7Z3Y9 468 aa16.47■□□□□ 0.23
TM9SF1-211ENST00000531406 ANKRD18AQ8IVF6 992 aa16.47■□□□□ 0.23
TM9SF1-211ENST00000531406 WWC1Q8IX03 1113 aa16.47■□□□□ 0.23
TM9SF1-211ENST00000531406 STK31Q9BXU1 1019 aa16.47■□□□□ 0.23
TM9SF1-211ENST00000531406 XDHP47989 1333 aa16.46■□□□□ 0.23
TM9SF1-211ENST00000531406 THSD7BQ9C0I4 1608 aa16.46■□□□□ 0.23
TM9SF1-211ENST00000531406 CTSWP56202 376 aa16.46■□□□□ 0.23
TM9SF1-211ENST00000531406 NEXNQ0ZGT2 675 aa16.46■□□□□ 0.23
TM9SF1-211ENST00000531406 TWISTNBQ3B726 338 aaPredicted RBP16.45■□□□□ 0.22
TM9SF1-211ENST00000531406 G2E3Q7L622 706 aa16.45■□□□□ 0.22
TM9SF1-211ENST00000531406 TTLL11Q8NHH1 800 aa16.45■□□□□ 0.22
TM9SF1-211ENST00000531406 DCPSQ96C86 337 aaKnown RBP16.45■□□□□ 0.22
TM9SF1-211ENST00000531406 IL16Q14005 1332 aa16.45■□□□□ 0.22
TM9SF1-211ENST00000531406 ADM5C9JUS6 153 aa16.44■□□□□ 0.22
TM9SF1-211ENST00000531406 SLC4A2P04920 1241 aa16.44■□□□□ 0.22
TM9SF1-211ENST00000531406 ATP2B4P23634 1241 aa16.44■□□□□ 0.22
TM9SF1-211ENST00000531406 BRPF1P55201 1214 aaPredicted RBP16.44■□□□□ 0.22
TM9SF1-211ENST00000531406 HUNKP57058 714 aa16.44■□□□□ 0.22
TM9SF1-211ENST00000531406 CWF19L2Q2TBE0 894 aaKnown RBP16.44■□□□□ 0.22
TM9SF1-211ENST00000531406 KIF4BQ2VIQ3 1234 aa16.44■□□□□ 0.22
TM9SF1-211ENST00000531406 RSBN1LQ6PCB5 846 aaPredicted RBP16.44■□□□□ 0.22
TM9SF1-211ENST00000531406 CDC5LQ99459 802 aaKnown RBP16.44■□□□□ 0.22
TM9SF1-211ENST00000531406 NEURL1BA8MQ27 555 aa16.43■□□□□ 0.22
TM9SF1-211ENST00000531406 H7C1W4 665 aa16.43■□□□□ 0.22
TM9SF1-211ENST00000531406 ZNF280AP59817 542 aaPredicted RBP16.43■□□□□ 0.22
TM9SF1-211ENST00000531406 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
TM9SF1-211ENST00000531406 AGBL3Q8NEM8 1001 aa16.43■□□□□ 0.22
TM9SF1-211ENST00000531406 GREM2Q9H772 168 aa16.43■□□□□ 0.22
TM9SF1-211ENST00000531406 TSKSQ9UJT2 592 aa16.43■□□□□ 0.22
TM9SF1-211ENST00000531406 ASTN2O75129 1339 aaPredicted RBP16.43■□□□□ 0.22
TM9SF1-211ENST00000531406 TRPM7Q96QT4 1865 aa16.42■□□□□ 0.22
TM9SF1-211ENST00000531406 WTIPA6NIX2 430 aaPredicted RBP16.42■□□□□ 0.22
TM9SF1-211ENST00000531406 CA12O43570 354 aa16.42■□□□□ 0.22
TM9SF1-211ENST00000531406 NOGQ13253 232 aa16.42■□□□□ 0.22
TM9SF1-211ENST00000531406 C2orf69Q8N8R5 385 aa16.42■□□□□ 0.22
TM9SF1-211ENST00000531406 ABHD8Q96I13 439 aa16.42■□□□□ 0.22
TM9SF1-211ENST00000531406 GMLQ99445 158 aa16.42■□□□□ 0.22
TM9SF1-211ENST00000531406 GBA2Q9HCG7 927 aaPredicted RBP16.42■□□□□ 0.22
TM9SF1-211ENST00000531406 BSDC1Q9NW68 430 aaPredicted RBP16.42■□□□□ 0.22
TM9SF1-211ENST00000531406 GGA3Q9NZ52 723 aa16.42■□□□□ 0.22
TM9SF1-211ENST00000531406 MINPP1Q9UNW1 487 aa16.42■□□□□ 0.22
TM9SF1-211ENST00000531406 ZNF609O15014 1411 aa16.42■□□□□ 0.22
TM9SF1-211ENST00000531406 USP17L3A6NCW0 530 aa16.41■□□□□ 0.22
TM9SF1-211ENST00000531406 USP17L4A6NCW7 530 aa16.41■□□□□ 0.22
TM9SF1-211ENST00000531406 USP17L1Q7RTZ2 530 aa16.41■□□□□ 0.22
TM9SF1-211ENST00000531406 UBE3BQ7Z3V4 1068 aa16.41■□□□□ 0.22
TM9SF1-211ENST00000531406 PODNQ7Z5L7 613 aa16.41■□□□□ 0.22
TM9SF1-211ENST00000531406 SULF1Q8IWU6 871 aa16.41■□□□□ 0.22
TM9SF1-211ENST00000531406 ZIC5Q96T25 663 aa16.41■□□□□ 0.22
TM9SF1-211ENST00000531406 FLIIQ13045 1269 aa16.4■□□□□ 0.22
TM9SF1-211ENST00000531406 SCARF1Q14162 830 aa16.4■□□□□ 0.22
TM9SF1-211ENST00000531406 RGMBQ6NW40 437 aa16.4■□□□□ 0.22
TM9SF1-211ENST00000531406 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
TM9SF1-211ENST00000531406 FAM155AB1AL88 458 aaPredicted RBP16.39■□□□□ 0.21
TM9SF1-211ENST00000531406 USP17L8P0C7I0 530 aa16.39■□□□□ 0.21
TM9SF1-211ENST00000531406 CCT4P50991 539 aaKnown RBP16.39■□□□□ 0.21
TM9SF1-211ENST00000531406 GCKRQ14397 625 aa16.39■□□□□ 0.21
TM9SF1-211ENST00000531406 ANGEL2Q5VTE6 544 aaKnown RBP16.39■□□□□ 0.21
TM9SF1-211ENST00000531406 FANCIQ9NVI1 1328 aa16.39■□□□□ 0.21
TM9SF1-211ENST00000531406 MED23Q9ULK4 1368 aa16.38■□□□□ 0.21
TM9SF1-211ENST00000531406 CASP7P55210 303 aa16.38■□□□□ 0.21
TM9SF1-211ENST00000531406 CCDC102AQ96A19 550 aa16.38■□□□□ 0.21
TM9SF1-211ENST00000531406 CDCA5Q96FF9 252 aa16.38■□□□□ 0.21
TM9SF1-211ENST00000531406 PLA2G12BQ9BX93 195 aa16.38■□□□□ 0.21
TM9SF1-211ENST00000531406 MYOZ2Q9NPC6 264 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms