RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 ALG1Q9BT22 464 aa16.64■□□□□ 0.25
LRRK1-207ENST00000531270 SBNO2Q9Y2G9 1366 aa16.63■□□□□ 0.25
LRRK1-207ENST00000531270 MARCKSP29966 332 aaPredicted RBP16.63■□□□□ 0.25
LRRK1-207ENST00000531270 CCDC117Q8IWD4 279 aaPredicted RBP16.63■□□□□ 0.25
LRRK1-207ENST00000531270 KCNK9Q9NPC2 374 aa16.63■□□□□ 0.25
LRRK1-207ENST00000531270 NAIPQ13075 1403 aa16.63■□□□□ 0.25
LRRK1-207ENST00000531270 GEN1Q17RS7 908 aa16.63■□□□□ 0.25
LRRK1-207ENST00000531270 CCDC114Q96M63 670 aa16.63■□□□□ 0.25
LRRK1-207ENST00000531270 CRCPO75575 148 aa16.62■□□□□ 0.25
LRRK1-207ENST00000531270 MCM5P33992 734 aa16.62■□□□□ 0.25
LRRK1-207ENST00000531270 OGFOD1Q8N543 542 aa16.62■□□□□ 0.25
LRRK1-207ENST00000531270 DYNC1I1O14576 645 aa16.62■□□□□ 0.25
LRRK1-207ENST00000531270 NBPF8Q3BBV2 869 aa16.62■□□□□ 0.25
LRRK1-207ENST00000531270 BRF1Q92994 677 aa16.62■□□□□ 0.25
LRRK1-207ENST00000531270 DNAI1Q9UI46 699 aa16.62■□□□□ 0.25
LRRK1-207ENST00000531270 FLIIQ13045 1269 aa16.62■□□□□ 0.25
LRRK1-207ENST00000531270 CCDC152Q4G0S7 254 aa16.62■□□□□ 0.25
LRRK1-207ENST00000531270 ZBTB43O43298 467 aa16.62■□□□□ 0.25
LRRK1-207ENST00000531270 UAP1Q16222 522 aaPredicted RBP16.62■□□□□ 0.25
LRRK1-207ENST00000531270 DNAJC21Q5F1R6 531 aaKnown RBP16.62■□□□□ 0.25
LRRK1-207ENST00000531270 DHX58Q96C10 678 aa16.62■□□□□ 0.25
LRRK1-207ENST00000531270 ANXA1P04083 346 aa16.61■□□□□ 0.25
LRRK1-207ENST00000531270 C20orf194Q5TEA3 1177 aa16.61■□□□□ 0.25
LRRK1-207ENST00000531270 TCEANC2Q96MN5 208 aa16.61■□□□□ 0.25
LRRK1-207ENST00000531270 C6orf50Q9HD87 102 aa16.61■□□□□ 0.25
LRRK1-207ENST00000531270 PKD2L1Q9P0L9 805 aa16.61■□□□□ 0.25
LRRK1-207ENST00000531270 TLDC2A0PJX2 215 aa16.61■□□□□ 0.25
LRRK1-207ENST00000531270 RTN1Q16799 776 aa16.61■□□□□ 0.25
LRRK1-207ENST00000531270 IRX5P78411 483 aaPredicted RBP16.61■□□□□ 0.25
LRRK1-207ENST00000531270 CCDC65Q8IXS2 484 aa16.61■□□□□ 0.25
LRRK1-207ENST00000531270 TMCO4Q5TGY1 634 aa16.61■□□□□ 0.25
LRRK1-207ENST00000531270 PPP1R21Q6ZMI0 780 aa16.61■□□□□ 0.25
LRRK1-207ENST00000531270 PLIN2Q99541 437 aa16.61■□□□□ 0.25
LRRK1-207ENST00000531270 NCOA2Q15596 1464 aa16.61■□□□□ 0.25
LRRK1-207ENST00000531270 HARSP12081 509 aaKnown RBP16.61■□□□□ 0.25
LRRK1-207ENST00000531270 IFT81Q8WYA0 676 aa16.61■□□□□ 0.25
LRRK1-207ENST00000531270 CCT6BQ92526 530 aa16.61■□□□□ 0.25
LRRK1-207ENST00000531270 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
LRRK1-207ENST00000531270 TACC1O75410 805 aa16.6■□□□□ 0.25
LRRK1-207ENST00000531270 PRPHP41219 470 aa16.6■□□□□ 0.25
LRRK1-207ENST00000531270 CCDC184Q52MB2 194 aa16.6■□□□□ 0.25
LRRK1-207ENST00000531270 CCDC129Q6ZRS4 1044 aa16.6■□□□□ 0.25
LRRK1-207ENST00000531270 MAK16Q9BXY0 300 aaKnown RBP16.6■□□□□ 0.25
LRRK1-207ENST00000531270 ATP6V0A2Q9Y487 856 aa16.6■□□□□ 0.25
LRRK1-207ENST00000531270 HCLS1P14317 486 aaPredicted RBP16.6■□□□□ 0.25
LRRK1-207ENST00000531270 KRT23Q9C075 422 aa16.6■□□□□ 0.25
LRRK1-207ENST00000531270 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.6■□□□□ 0.25
LRRK1-207ENST00000531270 V9GYY5 206 aaPredicted RBP16.6■□□□□ 0.25
LRRK1-207ENST00000531270 RARSP54136 660 aaKnown RBP16.6■□□□□ 0.25
LRRK1-207ENST00000531270 PPP1R7Q15435 360 aa16.6■□□□□ 0.25
LRRK1-207ENST00000531270 ANO6Q4KMQ2 910 aa16.6■□□□□ 0.25
LRRK1-207ENST00000531270 ANKS4BQ8N8V4 417 aa16.6■□□□□ 0.25
LRRK1-207ENST00000531270 CTAGE1Q96RT6 745 aa16.6■□□□□ 0.25
LRRK1-207ENST00000531270 SEC62Q99442 399 aaKnown RBP16.6■□□□□ 0.25
LRRK1-207ENST00000531270 GMNNO75496 209 aa16.6■□□□□ 0.25
LRRK1-207ENST00000531270 ALDH1L2Q3SY69 923 aa16.6■□□□□ 0.25
LRRK1-207ENST00000531270 CEP57Q86XR8 500 aa16.59■□□□□ 0.25
LRRK1-207ENST00000531270 MRRFQ96E11 262 aaKnown RBP16.59■□□□□ 0.25
LRRK1-207ENST00000531270 TTC36A6NLP5 189 aa16.59■□□□□ 0.25
LRRK1-207ENST00000531270 TNNI2P48788 182 aa16.59■□□□□ 0.25
LRRK1-207ENST00000531270 CHRNA2Q15822 529 aa16.59■□□□□ 0.25
LRRK1-207ENST00000531270 STMN4Q9H169 189 aaPredicted RBP16.59■□□□□ 0.25
LRRK1-207ENST00000531270 PHF8Q9UPP1 1060 aa16.59■□□□□ 0.25
LRRK1-207ENST00000531270 AQRO60306 1485 aaKnown RBP eCLIP16.59■□□□□ 0.25
LRRK1-207ENST00000531270 UQCRFS1P1P0C7P4 283 aa16.59■□□□□ 0.25
LRRK1-207ENST00000531270 SPDYE3A6NKU9 549 aa16.59■□□□□ 0.25
LRRK1-207ENST00000531270 RNF34Q969K3 372 aa16.59■□□□□ 0.25
LRRK1-207ENST00000531270 MKRN1Q9UHC7 482 aaKnown RBP16.59■□□□□ 0.25
LRRK1-207ENST00000531270 AOPEPQ8N6M6 819 aa16.58■□□□□ 0.25
LRRK1-207ENST00000531270 PPP1R9BQ96SB3 815 aa16.58■□□□□ 0.25
LRRK1-207ENST00000531270 TBC1D2Q9BYX2 928 aa16.58■□□□□ 0.25
LRRK1-207ENST00000531270 PSMA7O14818 248 aa16.58■□□□□ 0.25
LRRK1-207ENST00000531270 ERCC5P28715 1186 aaPredicted RBP16.58■□□□□ 0.25
LRRK1-207ENST00000531270 TBC1D9Q6ZT07 1266 aa16.58■□□□□ 0.25
LRRK1-207ENST00000531270 KIAA1524Q8TCG1 905 aa16.58■□□□□ 0.25
LRRK1-207ENST00000531270 ESR2Q92731 530 aa16.58■□□□□ 0.25
LRRK1-207ENST00000531270 UBE2HP62256 183 aa16.58■□□□□ 0.24
LRRK1-207ENST00000531270 CCDC121Q6ZUS5 278 aa16.58■□□□□ 0.24
LRRK1-207ENST00000531270 SETDB2Q96T68 719 aa16.58■□□□□ 0.24
LRRK1-207ENST00000531270 PI4KAP2A4QPH2 592 aa16.58■□□□□ 0.24
LRRK1-207ENST00000531270 BACH1O14867 736 aa16.58■□□□□ 0.24
LRRK1-207ENST00000531270 PI4KAP1Q8N8J0 262 aa16.58■□□□□ 0.24
LRRK1-207ENST00000531270 TTC14Q96N46 770 aa16.58■□□□□ 0.24
LRRK1-207ENST00000531270 TRIM7Q9C029 511 aa16.58■□□□□ 0.24
LRRK1-207ENST00000531270 CNPY2Q9Y2B0 182 aa16.58■□□□□ 0.24
LRRK1-207ENST00000531270 CEP83Q9Y592 693 aa16.58■□□□□ 0.24
LRRK1-207ENST00000531270 RIMBP2O15034 1052 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 ZEB2O60315 1214 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 STX17P56962 302 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 NAA25Q14CX7 972 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 NAA16Q6N069 864 aaPredicted RBP16.57■□□□□ 0.24
LRRK1-207ENST00000531270 MICALL1Q8N3F8 863 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 LMBR1Q8WVP7 490 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 OPA1O60313 960 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 KRT5P13647 590 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 RFX1P22670 979 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 CCDC14Q49A88 953 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 ATP6V1AP38606 617 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 TEX13AQ9BXU3 409 aaPredicted RBP16.57■□□□□ 0.24
LRRK1-207ENST00000531270 HFM1A2PYH4 1435 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms