RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 BICC1Q9H694 974 aaKnown RBP12.19□□□□□ -0.46
CTNND1-228ENST00000531007 EIF5BO60841 1220 aaKnown RBP12.18□□□□□ -0.46
CTNND1-228ENST00000531007 VARS2Q5ST30 1063 aaKnown RBP12.18□□□□□ -0.46
CTNND1-228ENST00000531007 NYXQ9GZU5 481 aa12.18□□□□□ -0.46
CTNND1-228ENST00000531007 COPRSQ9NQ92 184 aa12.18□□□□□ -0.46
CTNND1-228ENST00000531007 SCN7AQ01118 1682 aa12.18□□□□□ -0.46
CTNND1-228ENST00000531007 SH3TC1Q8TE82 1336 aa12.17□□□□□ -0.46
CTNND1-228ENST00000531007 SURF6O75683 361 aaKnown RBP12.17□□□□□ -0.46
CTNND1-228ENST00000531007 NUDT7P0C024 238 aa12.17□□□□□ -0.46
CTNND1-228ENST00000531007 RFC4P35249 363 aa12.17□□□□□ -0.46
CTNND1-228ENST00000531007 DDX27Q96GQ7 796 aaKnown RBP12.17□□□□□ -0.46
CTNND1-228ENST00000531007 LARP6Q9BRS8 491 aaKnown RBP12.17□□□□□ -0.46
CTNND1-228ENST00000531007 UTP14AQ9BVJ6 771 aaKnown RBP12.17□□□□□ -0.46
CTNND1-228ENST00000531007 LRRC4BQ9NT99 713 aa12.17□□□□□ -0.46
CTNND1-228ENST00000531007 TRMT112Q9UI30 125 aaKnown RBP12.17□□□□□ -0.46
CTNND1-228ENST00000531007 USP42Q9H9J4 1324 aaKnown RBP12.16□□□□□ -0.46
CTNND1-228ENST00000531007 TBC1D12O60347 775 aa12.16□□□□□ -0.46
CTNND1-228ENST00000531007 PDE8AO60658 829 aa12.16□□□□□ -0.46
CTNND1-228ENST00000531007 CSF1RP07333 972 aa12.16□□□□□ -0.46
CTNND1-228ENST00000531007 FOXO4P98177 505 aa12.16□□□□□ -0.46
CTNND1-228ENST00000531007 G3BP1Q13283 466 aaKnown RBP eCLIP12.16□□□□□ -0.46
CTNND1-228ENST00000531007 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
CTNND1-228ENST00000531007 ARHGEF1Q92888 912 aaKnown RBP12.16□□□□□ -0.46
CTNND1-228ENST00000531007 NIP7Q9Y221 180 aaKnown RBP eCLIP12.16□□□□□ -0.46
CTNND1-228ENST00000531007 EP400Q96L91 3159 aa12.16□□□□□ -0.46
CTNND1-228ENST00000531007 TNS1Q9HBL0 1735 aaKnown RBP12.15□□□□□ -0.46
CTNND1-228ENST00000531007 IRS4O14654 1257 aaPredicted RBP12.15□□□□□ -0.46
CTNND1-228ENST00000531007 RGS3P49796 1198 aa12.15□□□□□ -0.46
CTNND1-228ENST00000531007 OS9Q13438 667 aaPredicted RBP12.15□□□□□ -0.46
CTNND1-228ENST00000531007 LMBR1LQ6UX01 489 aa12.15□□□□□ -0.46
CTNND1-228ENST00000531007 SETDB2Q96T68 719 aa12.15□□□□□ -0.46
CTNND1-228ENST00000531007 LNPKQ9C0E8 428 aa12.15□□□□□ -0.46
CTNND1-228ENST00000531007 AOX1Q06278 1338 aa12.14□□□□□ -0.47
CTNND1-228ENST00000531007 UBN2Q6ZU65 1347 aa12.14□□□□□ -0.47
CTNND1-228ENST00000531007 CIAO1O76071 339 aa12.14□□□□□ -0.47
CTNND1-228ENST00000531007 GPTP24298 496 aa12.14□□□□□ -0.47
CTNND1-228ENST00000531007 BAG6P46379 1132 aa12.14□□□□□ -0.47
CTNND1-228ENST00000531007 RFX5P48382 616 aaPredicted RBP12.14□□□□□ -0.47
CTNND1-228ENST00000531007 MFSD10Q14728 455 aa12.14□□□□□ -0.47
CTNND1-228ENST00000531007 CCDC57Q2TAC2 916 aa12.14□□□□□ -0.47
CTNND1-228ENST00000531007 DEFB132Q7Z7B7 95 aa12.14□□□□□ -0.47
CTNND1-228ENST00000531007 CLASRPQ8N2M8 674 aaKnown RBP12.14□□□□□ -0.47
CTNND1-228ENST00000531007 RHPN1Q8TCX5 695 aa12.14□□□□□ -0.47
CTNND1-228ENST00000531007 FAM89AQ96GI7 184 aa12.14□□□□□ -0.47
CTNND1-228ENST00000531007 OSBPL3Q9H4L5 887 aa12.14□□□□□ -0.47
CTNND1-228ENST00000531007 EXOC6BQ9Y2D4 811 aa12.14□□□□□ -0.47
CTNND1-228ENST00000531007 RTL9Q8NET4 1388 aa12.14□□□□□ -0.47
CTNND1-228ENST00000531007 UBR3Q6ZT12 1888 aa12.13□□□□□ -0.47
CTNND1-228ENST00000531007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.13□□□□□ -0.47
CTNND1-228ENST00000531007 NTSR2O95665 410 aa12.13□□□□□ -0.47
CTNND1-228ENST00000531007 CTSWP56202 376 aa12.13□□□□□ -0.47
CTNND1-228ENST00000531007 KCNQ4P56696 695 aa12.13□□□□□ -0.47
CTNND1-228ENST00000531007 FAM161AQ3B820 660 aa12.13□□□□□ -0.47
CTNND1-228ENST00000531007 BMP2KLQ5H9B9 411 aa12.13□□□□□ -0.47
CTNND1-228ENST00000531007 EPHA10Q5JZY3 1008 aa12.13□□□□□ -0.47
CTNND1-228ENST00000531007 SLC10A5Q5PT55 438 aa12.13□□□□□ -0.47
CTNND1-228ENST00000531007 SUSD4Q5VX71 490 aa12.13□□□□□ -0.47
CTNND1-228ENST00000531007 USPL1Q5W0Q7 1092 aa12.13□□□□□ -0.47
CTNND1-228ENST00000531007 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
CTNND1-228ENST00000531007 IL15P40933 162 aaPredicted RBP12.12□□□□□ -0.47
CTNND1-228ENST00000531007 PTPN12Q05209 780 aaKnown RBP12.12□□□□□ -0.47
CTNND1-228ENST00000531007 IFIT5Q13325 482 aaKnown RBP12.12□□□□□ -0.47
CTNND1-228ENST00000531007 GPATCH3Q96I76 525 aa12.12□□□□□ -0.47
CTNND1-228ENST00000531007 BCL2L12Q9HB09 334 aa12.12□□□□□ -0.47
CTNND1-228ENST00000531007 GPR108Q9NPR9 543 aa12.12□□□□□ -0.47
CTNND1-228ENST00000531007 STAP2Q9UGK3 403 aa12.12□□□□□ -0.47
CTNND1-228ENST00000531007 CARMIL3Q8ND23 1372 aa12.12□□□□□ -0.47
CTNND1-228ENST00000531007 LAMB2P55268 1798 aa12.12□□□□□ -0.47
CTNND1-228ENST00000531007 TTC41PQ6P2S7 1318 aa12.11□□□□□ -0.47
CTNND1-228ENST00000531007 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
CTNND1-228ENST00000531007 COL24A1Q17RW2 1714 aa12.11□□□□□ -0.47
CTNND1-228ENST00000531007 ANKRD18BA2A2Z9 1011 aa12.11□□□□□ -0.47
CTNND1-228ENST00000531007 EN1Q05925 392 aaPredicted RBP12.11□□□□□ -0.47
CTNND1-228ENST00000531007 CCDC152Q4G0S7 254 aa12.11□□□□□ -0.47
CTNND1-228ENST00000531007 PLEKHM2Q8IWE5 1019 aa12.11□□□□□ -0.47
CTNND1-228ENST00000531007 TTLL11Q8NHH1 800 aa12.11□□□□□ -0.47
CTNND1-228ENST00000531007 OXER1Q8TDS5 423 aa12.11□□□□□ -0.47
CTNND1-228ENST00000531007 CAMKK2Q96RR4 588 aa12.11□□□□□ -0.47
CTNND1-228ENST00000531007 TFCP2L1Q9NZI6 479 aa12.11□□□□□ -0.47
CTNND1-228ENST00000531007 CHMP3Q9Y3E7 222 aa12.11□□□□□ -0.47
CTNND1-228ENST00000531007 MYH3P11055 1940 aa12.11□□□□□ -0.47
CTNND1-228ENST00000531007 RIC1Q4ADV7 1423 aa12.11□□□□□ -0.47
CTNND1-228ENST00000531007 EYA2O00167 538 aa12.1□□□□□ -0.47
CTNND1-228ENST00000531007 GTF2E1P29083 439 aaPredicted RBP12.1□□□□□ -0.47
CTNND1-228ENST00000531007 SF3B3Q15393 1217 aaKnown RBP12.1□□□□□ -0.47
CTNND1-228ENST00000531007 TAF7LQ5H9L4 462 aa12.1□□□□□ -0.47
CTNND1-228ENST00000531007 TBC1D9BQ66K14 1250 aa12.1□□□□□ -0.47
CTNND1-228ENST00000531007 NBPF5PQ86XG9 351 aaPredicted RBP12.1□□□□□ -0.47
CTNND1-228ENST00000531007 ZNF687Q8N1G0 1237 aa12.1□□□□□ -0.47
CTNND1-228ENST00000531007 NLGN1Q8N2Q7 840 aa12.1□□□□□ -0.47
CTNND1-228ENST00000531007 SALL3Q9BXA9 1300 aa12.1□□□□□ -0.47
CTNND1-228ENST00000531007 ERC2O15083 957 aa12.09□□□□□ -0.47
CTNND1-228ENST00000531007 PHF14O94880 888 aa12.09□□□□□ -0.47
CTNND1-228ENST00000531007 MX1P20591 662 aa12.09□□□□□ -0.47
CTNND1-228ENST00000531007 PDE1AP54750 535 aa12.09□□□□□ -0.47
CTNND1-228ENST00000531007 JARID2Q92833 1246 aaPredicted RBP12.09□□□□□ -0.47
CTNND1-228ENST00000531007 BACH2Q9BYV9 841 aa12.09□□□□□ -0.47
CTNND1-228ENST00000531007 LHX6Q9UPM6 363 aa12.09□□□□□ -0.47
CTNND1-228ENST00000531007 AKAP2Q9Y2D5 859 aa12.09□□□□□ -0.47
CTNND1-228ENST00000531007 APBB1O00213 710 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms