RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 CCDC152Q4G0S7 254 aa20.41■□□□□ 0.86
CHMP4A-204ENST00000530996 RBM26Q5T8P6 1007 aaKnown RBP20.41■□□□□ 0.86
CHMP4A-204ENST00000530996 TBC1D16Q8TBP0 767 aa20.41■□□□□ 0.86
CHMP4A-204ENST00000530996 SEC31BQ9NQW1 1179 aa20.41■□□□□ 0.86
CHMP4A-204ENST00000530996 RPS12P25398 132 aaKnown RBP20.4■□□□□ 0.86
CHMP4A-204ENST00000530996 KRT26Q7Z3Y9 468 aa20.4■□□□□ 0.86
CHMP4A-204ENST00000530996 USP48Q86UV5 1035 aa20.4■□□□□ 0.86
CHMP4A-204ENST00000530996 DPF2Q92785 391 aa20.4■□□□□ 0.86
CHMP4A-204ENST00000530996 ZC3H12CQ9C0D7 883 aaKnown RBP20.4■□□□□ 0.86
CHMP4A-204ENST00000530996 CWC25Q9NXE8 425 aaPredicted RBP20.4■□□□□ 0.86
CHMP4A-204ENST00000530996 PGAP2Q9UHJ9 254 aa20.4■□□□□ 0.86
CHMP4A-204ENST00000530996 GGA1Q9UJY5 639 aa20.4■□□□□ 0.86
CHMP4A-204ENST00000530996 MAP2K2P36507 400 aa20.39■□□□□ 0.85
CHMP4A-204ENST00000530996 CCDC30Q5VVM6 783 aa20.39■□□□□ 0.85
CHMP4A-204ENST00000530996 CCDC191Q8NCU4 936 aa20.39■□□□□ 0.85
CHMP4A-204ENST00000530996 JARID2Q92833 1246 aaPredicted RBP20.39■□□□□ 0.85
CHMP4A-204ENST00000530996 RTL9Q8NET4 1388 aa20.38■□□□□ 0.85
CHMP4A-204ENST00000530996 PCCAP05165 728 aaPredicted RBP20.38■□□□□ 0.85
CHMP4A-204ENST00000530996 HUNKP57058 714 aa20.38■□□□□ 0.85
CHMP4A-204ENST00000530996 KIF4BQ2VIQ3 1234 aa20.38■□□□□ 0.85
CHMP4A-204ENST00000530996 C8orf58Q8NAV2 365 aa20.38■□□□□ 0.85
CHMP4A-204ENST00000530996 DCPSQ96C86 337 aaKnown RBP20.38■□□□□ 0.85
CHMP4A-204ENST00000530996 ABHD8Q96I13 439 aa20.38■□□□□ 0.85
CHMP4A-204ENST00000530996 CHMP4AQ9BY43 222 aa20.38■□□□□ 0.85
CHMP4A-204ENST00000530996 PDE8AO60658 829 aa20.37■□□□□ 0.85
CHMP4A-204ENST00000530996 ANKRD18AQ8IVF6 992 aa20.37■□□□□ 0.85
CHMP4A-204ENST00000530996 HHIPL1Q96JK4 782 aa20.37■□□□□ 0.85
CHMP4A-204ENST00000530996 KCNQ5Q9NR82 932 aa20.37■□□□□ 0.85
CHMP4A-204ENST00000530996 ADM5C9JUS6 153 aa20.36■□□□□ 0.85
CHMP4A-204ENST00000530996 EGFRP00533 1210 aa20.36■□□□□ 0.85
CHMP4A-204ENST00000530996 BRPF1P55201 1214 aaPredicted RBP20.36■□□□□ 0.85
CHMP4A-204ENST00000530996 DLK2Q6UY11 383 aa20.36■□□□□ 0.85
CHMP4A-204ENST00000530996 METTL22Q9BUU2 404 aaPredicted RBP20.36■□□□□ 0.85
CHMP4A-204ENST00000530996 STK31Q9BXU1 1019 aa20.36■□□□□ 0.85
CHMP4A-204ENST00000530996 GGA3Q9NZ52 723 aa20.36■□□□□ 0.85
CHMP4A-204ENST00000530996 MAP3K2Q9Y2U5 619 aa20.36■□□□□ 0.85
CHMP4A-204ENST00000530996 CA12O43570 354 aa20.35■□□□□ 0.85
CHMP4A-204ENST00000530996 TSR2Q969E8 191 aaKnown RBP20.35■□□□□ 0.85
CHMP4A-204ENST00000530996 PODXL2Q9NZ53 605 aa20.35■□□□□ 0.85
CHMP4A-204ENST00000530996 XDHP47989 1333 aa20.34■□□□□ 0.85
CHMP4A-204ENST00000530996 NEXNQ0ZGT2 675 aa20.34■□□□□ 0.85
CHMP4A-204ENST00000530996 NOGQ13253 232 aa20.34■□□□□ 0.85
CHMP4A-204ENST00000530996 SULF1Q8IWU6 871 aa20.34■□□□□ 0.85
CHMP4A-204ENST00000530996 GBA2Q9HCG7 927 aaPredicted RBP20.34■□□□□ 0.85
CHMP4A-204ENST00000530996 CTSWP56202 376 aa20.33■□□□□ 0.85
CHMP4A-204ENST00000530996 TSPYL6Q8N831 410 aa20.33■□□□□ 0.85
CHMP4A-204ENST00000530996 C2orf69Q8N8R5 385 aa20.33■□□□□ 0.85
CHMP4A-204ENST00000530996 CDC5LQ99459 802 aaKnown RBP20.33■□□□□ 0.85
CHMP4A-204ENST00000530996 PI4KAP2A4QPH2 592 aa20.31■□□□□ 0.84
CHMP4A-204ENST00000530996 CCDC85CA6NKD9 419 aa20.31■□□□□ 0.84
CHMP4A-204ENST00000530996 VIL1P09327 827 aaKnown RBP20.31■□□□□ 0.84
CHMP4A-204ENST00000530996 PI4KAP1Q8N8J0 262 aa20.31■□□□□ 0.84
CHMP4A-204ENST00000530996 FBXW7Q969H0 707 aa20.31■□□□□ 0.84
CHMP4A-204ENST00000530996 RGMBQ6NW40 437 aa20.3■□□□□ 0.84
CHMP4A-204ENST00000530996 RSBN1LQ6PCB5 846 aaPredicted RBP20.3■□□□□ 0.84
CHMP4A-204ENST00000530996 KSR2Q6VAB6 950 aa20.3■□□□□ 0.84
CHMP4A-204ENST00000530996 ASTN2O75129 1339 aaPredicted RBP20.29■□□□□ 0.84
CHMP4A-204ENST00000530996 ATP2B4P23634 1241 aa20.29■□□□□ 0.84
CHMP4A-204ENST00000530996 ZNF157P51786 506 aaPredicted RBP20.29■□□□□ 0.84
CHMP4A-204ENST00000530996 IGKV5-2P06315 115 aa20.28■□□□□ 0.84
CHMP4A-204ENST00000530996 CWF19L2Q2TBE0 894 aaKnown RBP20.28■□□□□ 0.84
CHMP4A-204ENST00000530996 TWISTNBQ3B726 338 aaPredicted RBP20.28■□□□□ 0.84
CHMP4A-204ENST00000530996 ANGEL2Q5VTE6 544 aaKnown RBP20.28■□□□□ 0.84
CHMP4A-204ENST00000530996 UBE3BQ7Z3V4 1068 aa20.28■□□□□ 0.84
CHMP4A-204ENST00000530996 AGBL3Q8NEM8 1001 aa20.28■□□□□ 0.84
CHMP4A-204ENST00000530996 ZIC5Q96T25 663 aa20.28■□□□□ 0.84
CHMP4A-204ENST00000530996 USP17L3A6NCW0 530 aa20.27■□□□□ 0.84
CHMP4A-204ENST00000530996 USP17L4A6NCW7 530 aa20.27■□□□□ 0.84
CHMP4A-204ENST00000530996 FAM161AQ3B820 660 aa20.27■□□□□ 0.84
CHMP4A-204ENST00000530996 USP17L1Q7RTZ2 530 aa20.27■□□□□ 0.84
CHMP4A-204ENST00000530996 CDCA5Q96FF9 252 aa20.27■□□□□ 0.84
CHMP4A-204ENST00000530996 GREM2Q9H772 168 aa20.27■□□□□ 0.84
CHMP4A-204ENST00000530996 MED23Q9ULK4 1368 aa20.26■□□□□ 0.83
CHMP4A-204ENST00000530996 USP17L8P0C7I0 530 aa20.26■□□□□ 0.83
CHMP4A-204ENST00000530996 SCARF1Q14162 830 aa20.26■□□□□ 0.83
CHMP4A-204ENST00000530996 CCDC102AQ96A19 550 aa20.26■□□□□ 0.83
CHMP4A-204ENST00000530996 ZNF609O15014 1411 aa20.26■□□□□ 0.83
CHMP4A-204ENST00000530996 SCN9AQ15858 1988 aa20.25■□□□□ 0.83
CHMP4A-204ENST00000530996 NEURL1BA8MQ27 555 aa20.25■□□□□ 0.83
CHMP4A-204ENST00000530996 IGHMBP2P38935 993 aaKnown RBP20.25■□□□□ 0.83
CHMP4A-204ENST00000530996 ZNF280AP59817 542 aaPredicted RBP20.25■□□□□ 0.83
CHMP4A-204ENST00000530996 TTLL11Q8NHH1 800 aa20.25■□□□□ 0.83
CHMP4A-204ENST00000530996 MCOLN1Q9GZU1 580 aa20.25■□□□□ 0.83
CHMP4A-204ENST00000530996 MYOZ2Q9NPC6 264 aa20.25■□□□□ 0.83
CHMP4A-204ENST00000530996 FAM155AB1AL88 458 aaPredicted RBP20.24■□□□□ 0.83
CHMP4A-204ENST00000530996 SLC4A2P04920 1241 aa20.24■□□□□ 0.83
CHMP4A-204ENST00000530996 DGKZQ13574 1117 aa20.24■□□□□ 0.83
CHMP4A-204ENST00000530996 PODNQ7Z5L7 613 aa20.24■□□□□ 0.83
CHMP4A-204ENST00000530996 WWC1Q8IX03 1113 aa20.24■□□□□ 0.83
CHMP4A-204ENST00000530996 BSDC1Q9NW68 430 aaPredicted RBP20.24■□□□□ 0.83
CHMP4A-204ENST00000530996 CCT4P50991 539 aaKnown RBP20.23■□□□□ 0.83
CHMP4A-204ENST00000530996 KIF23Q02241 960 aaPredicted RBP20.23■□□□□ 0.83
CHMP4A-204ENST00000530996 FKBP5Q13451 457 aaPredicted RBP20.23■□□□□ 0.83
CHMP4A-204ENST00000530996 CCDC184Q52MB2 194 aa20.23■□□□□ 0.83
CHMP4A-204ENST00000530996 G2E3Q7L622 706 aa20.23■□□□□ 0.83
CHMP4A-204ENST00000530996 MINPP1Q9UNW1 487 aa20.23■□□□□ 0.83
CHMP4A-204ENST00000530996 SLC10A3P09131 477 aa20.22■□□□□ 0.83
CHMP4A-204ENST00000530996 KCNJ4P48050 445 aa20.22■□□□□ 0.83
CHMP4A-204ENST00000530996 FLIIQ13045 1269 aa20.22■□□□□ 0.83
CHMP4A-204ENST00000530996 CCDC27Q2M243 656 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms