RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 XAGE3Q8WTP9 111 aa6.03□□□□□ -1.44
SSBP3-213ENST00000530618 ISCA1Q9BUE6 129 aa6.03□□□□□ -1.44
SSBP3-213ENST00000530618 PGAP2Q9UHJ9 254 aa6.03□□□□□ -1.44
SSBP3-213ENST00000530618 WDR33Q9C0J8 1336 aaKnown RBP6.02□□□□□ -1.45
SSBP3-213ENST00000530618 ECM29Q5VYK3 1845 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 GTF2E1P29083 439 aaPredicted RBP6.02□□□□□ -1.45
SSBP3-213ENST00000530618 KIAA2012Q0VF49 1180 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 AIMP1Q12904 312 aaKnown RBP6.02□□□□□ -1.45
SSBP3-213ENST00000530618 TCIRG1Q13488 830 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 AAMPQ13685 434 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 ATF7IPQ6VMQ6 1270 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 ANKRD13DQ6ZTN6 518 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 COPS6Q7L5N1 327 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 PPP1R42Q7Z4L9 355 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 PNMA8AQ86V59 439 aaPredicted RBP6.02□□□□□ -1.45
SSBP3-213ENST00000530618 SP8Q8IXZ3 490 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 LARGE2Q8N3Y3 721 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 TSPYL6Q8N831 410 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 PLBD2Q8NHP8 589 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 SSH1Q8WYL5 1049 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 RPGRQ92834 1020 aaKnown RBP6.02□□□□□ -1.45
SSBP3-213ENST00000530618 RBM17Q96I25 401 aaKnown RBP6.02□□□□□ -1.45
SSBP3-213ENST00000530618 UTP14AQ9BVJ6 771 aaKnown RBP6.02□□□□□ -1.45
SSBP3-213ENST00000530618 GPRC5DQ9NZD1 345 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 TLL2Q9Y6L7 1015 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 RTL9Q8NET4 1388 aa6.02□□□□□ -1.45
SSBP3-213ENST00000530618 CDHR2Q9BYE9 1310 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 TCERG1O14776 1098 aaKnown RBP6.01□□□□□ -1.45
SSBP3-213ENST00000530618 PPIP5K2O43314 1243 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 EGFRP00533 1210 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 CTCFP49711 727 aaPredicted RBP6.01□□□□□ -1.45
SSBP3-213ENST00000530618 GMPSP49915 693 aaPredicted RBP6.01□□□□□ -1.45
SSBP3-213ENST00000530618 LBX1P52954 281 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 EIF6P56537 245 aaKnown RBP6.01□□□□□ -1.45
SSBP3-213ENST00000530618 GRAPQ13588 217 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 PDE3AQ14432 1141 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 DEFB115Q30KQ5 88 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 GRIPAP1Q4V328 841 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 CYP4F22Q6NT55 531 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 SLC4A10Q6U841 1118 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 DLK2Q6UY11 383 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 KSR2Q6VAB6 950 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 USP50Q70EL3 339 aaPredicted RBP6.01□□□□□ -1.45
SSBP3-213ENST00000530618 DZIP1LQ8IYY4 767 aaKnown RBP6.01□□□□□ -1.45
SSBP3-213ENST00000530618 MRPL50Q8N5N7 158 aaKnown RBP6.01□□□□□ -1.45
SSBP3-213ENST00000530618 GRAPLQ8TC17 118 aaPredicted RBP6.01□□□□□ -1.45
SSBP3-213ENST00000530618 DNAAF4Q8WXU2 420 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 CELF1Q92879 486 aaKnown RBP6.01□□□□□ -1.45
SSBP3-213ENST00000530618 NLRP3Q96P20 1036 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 BCL2L13Q9BXK5 485 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 VPS33BQ9H267 617 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 ZNRF3Q9ULT6 936 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 NOB1Q9ULX3 412 aaKnown RBP6.01□□□□□ -1.45
SSBP3-213ENST00000530618 GJA3Q9Y6H8 435 aa6.01□□□□□ -1.45
SSBP3-213ENST00000530618 BBOX1O75936 387 aa6□□□□□ -1.45
SSBP3-213ENST00000530618 GNAI3P08754 354 aa6□□□□□ -1.45
SSBP3-213ENST00000530618 RRP1P56182 461 aaKnown RBP6□□□□□ -1.45
SSBP3-213ENST00000530618 TRIM28Q13263 835 aaKnown RBP6□□□□□ -1.45
SSBP3-213ENST00000530618 SF3B3Q15393 1217 aaKnown RBP6□□□□□ -1.45
SSBP3-213ENST00000530618 SAPCD2Q86UD0 394 aa6□□□□□ -1.45
SSBP3-213ENST00000530618 ITPRIPQ8IWB1 547 aa6□□□□□ -1.45
SSBP3-213ENST00000530618 NIM1KQ8IY84 436 aa6□□□□□ -1.45
SSBP3-213ENST00000530618 LINS1Q8NG48 757 aa6□□□□□ -1.45
SSBP3-213ENST00000530618 JDP2Q8WYK2 163 aa6□□□□□ -1.45
SSBP3-213ENST00000530618 CAPNS2Q96L46 248 aa6□□□□□ -1.45
SSBP3-213ENST00000530618 ZIC5Q96T25 663 aa6□□□□□ -1.45
SSBP3-213ENST00000530618 GLIS2Q9BZE0 524 aaPredicted RBP6□□□□□ -1.45
SSBP3-213ENST00000530618 SRCIN1Q9C0H9 1055 aa6□□□□□ -1.45
SSBP3-213ENST00000530618 KCNQ5Q9NR82 932 aa6□□□□□ -1.45
SSBP3-213ENST00000530618 ADARB2Q9NS39 739 aaKnown RBP6□□□□□ -1.45
SSBP3-213ENST00000530618 C9orf78Q9NZ63 289 aaPredicted RBP6□□□□□ -1.45
SSBP3-213ENST00000530618 DDX19BQ9UMR2 479 aa6□□□□□ -1.45
SSBP3-213ENST00000530618 CLEC11AQ9Y240 323 aa6□□□□□ -1.45
SSBP3-213ENST00000530618 PAPPA2Q9BXP8 1791 aa6□□□□□ -1.45
SSBP3-213ENST00000530618 SH3TC1Q8TE82 1336 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 PI4KAP2A4QPH2 592 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 AOC2O75106 756 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 BCAR3O75815 825 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 ALDH1L1O75891 902 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 RAD17O75943 681 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 GPSM2P81274 684 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 CIAPIN1Q6FI81 312 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 MPNDQ8N594 471 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 PI4KAP1Q8N8J0 262 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 CCDC191Q8NCU4 936 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 FAM89AQ96GI7 184 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 GPR101Q96P66 508 aaPredicted RBP5.99□□□□□ -1.45
SSBP3-213ENST00000530618 METTL22Q9BUU2 404 aaPredicted RBP5.99□□□□□ -1.45
SSBP3-213ENST00000530618 TMX4Q9H1E5 349 aaPredicted RBP5.99□□□□□ -1.45
SSBP3-213ENST00000530618 CWC25Q9NXE8 425 aaPredicted RBP5.99□□□□□ -1.45
SSBP3-213ENST00000530618 POLLQ9UGP5 575 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 MAP3K2Q9Y2U5 619 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 ARAP2Q8WZ64 1704 aa5.99□□□□□ -1.45
SSBP3-213ENST00000530618 ASTN2O75129 1339 aaPredicted RBP5.99□□□□□ -1.45
SSBP3-213ENST00000530618 OTOFQ9HC10 1997 aa5.98□□□□□ -1.45
SSBP3-213ENST00000530618 WTIPA6NIX2 430 aaPredicted RBP5.98□□□□□ -1.45
SSBP3-213ENST00000530618 FAM155AB1AL88 458 aaPredicted RBP5.98□□□□□ -1.45
SSBP3-213ENST00000530618 ATP5J2-PTCD1G3V325 749 aa5.98□□□□□ -1.45
SSBP3-213ENST00000530618 PSMD14O00487 310 aa5.98□□□□□ -1.45
SSBP3-213ENST00000530618 UBTFL1P0CB47 393 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms