RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 COL24A1Q17RW2 1714 aa10.46□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 QSER1Q2KHR3 1735 aa10.45□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 TAF5LO75529 589 aa10.45□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 CHRNDQ07001 517 aa10.45□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 TNNI3KQ59H18 835 aa10.45□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 GORABQ5T7V8 394 aa10.45□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 STYK1Q6J9G0 422 aa10.45□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 OTUD7AQ8TE49 926 aaPredicted RBP10.45□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 EAF2Q96CJ1 260 aaPredicted RBP10.45□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 ANKRD2Q9GZV1 360 aa10.45□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 TMX4Q9H1E5 349 aaPredicted RBP10.45□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 GPR108Q9NPR9 543 aa10.45□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 MINPP1Q9UNW1 487 aa10.45□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.45□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 FPGT-TNNI3KV9GXZ4 949 aa10.45□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 A0A0G2JLW4 131 aa10.44□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 PPEF1O14829 653 aaPredicted RBP10.44□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 PDE8BO95263 885 aa10.44□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 KCNJ4P48050 445 aa10.44□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 TIMM10P62072 90 aa10.44□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 ATP2B3Q16720 1220 aa10.44□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 PLEKHM2Q8IWE5 1019 aa10.44□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 PELP1Q8IZL8 1130 aaKnown RBP10.44□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 CNKSR1Q969H4 720 aa10.44□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 GPATCH3Q96I76 525 aa10.44□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 SOCS7O14512 581 aa10.43□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 DPEP1P16444 411 aa10.43□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 MX1P20591 662 aa10.43□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 PTGER2P43116 358 aa10.43□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 TGFB2P61812 414 aa10.43□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 PUM3Q15397 648 aaKnown RBP10.43□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 TMC4Q7Z404 712 aa10.43□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 SP8Q8IXZ3 490 aa10.43□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 ANKIB1Q9P2G1 1089 aa10.43□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 ZNF219Q9P2Y4 722 aaPredicted RBP10.43□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 DDX60Q8IY21 1712 aaKnown RBP10.43□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 A0A1B0GUL7 405 aa10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 IFIT1P09914 478 aaKnown RBP10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 SLC5A1P13866 664 aa10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 PDE1AP54750 535 aa10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 TSHZ3Q63HK5 1081 aa10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 VGLL2Q8N8G2 317 aa10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 LPIN2Q92539 896 aa10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 XAGE2Q96GT9 111 aa10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 SGIP1Q9BQI5 828 aa10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 DBNDD2Q9BQY9 259 aa10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 ECHDC1Q9NTX5 307 aa10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 TLR7Q9NYK1 1049 aaKnown RBP10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 NSFL1CQ9UNZ2 370 aaKnown RBP10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 ATP6V0A2Q9Y487 856 aa10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 CD2APQ9Y5K6 639 aa10.42□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 C10orf71Q711Q0 1435 aa10.41□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 TNRC6CQ9HCJ0 1690 aaKnown RBP10.41□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 SNAP23O00161 211 aa10.41□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 ERC2O15083 957 aa10.41□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 ADORA1P30542 326 aa10.41□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 GPSM2P81274 684 aa10.41□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 CCDC158Q5M9N0 1113 aa10.41□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 TTLL6Q8N841 843 aa10.41□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 STAP2Q9UGK3 403 aa10.41□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 DBNLQ9UJU6 430 aaKnown RBP10.41□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 ZNF804BA4D1E1 1349 aa10.4□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 XDHP47989 1333 aa10.4□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 TTC41PQ6P2S7 1318 aa10.4□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 CASZ1Q86V15 1759 aa10.4□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 FGFR2P21802 821 aa10.4□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 UBE4AQ14139 1066 aa10.4□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 TTC39AQ5SRH9 613 aa10.4□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 PRPF40BQ6NWY9 871 aaKnown RBP10.4□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 OSBPL3Q9H4L5 887 aa10.4□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 PIM2Q9P1W9 311 aa10.4□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 GGA1Q9UJY5 639 aa10.4□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 LEMD3Q9Y2U8 911 aa10.4□□□□□ -0.74
NEDD8-MDP1-201ENST00000530579 LAMB2P55268 1798 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 SALL3Q9BXA9 1300 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 NRXN2Q9P2S2 1712 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 WTIPA6NIX2 430 aaPredicted RBP10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 TRIM6-TRIM34B2RNG4 842 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 C6orf229H3BNL8 230 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 GLRX3O76003 335 aaKnown RBP10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 UFL1O94874 794 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 KCNA3P22001 575 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 ATP2B4P23634 1241 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 DALRD3Q5D0E6 543 aaKnown RBP10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 TTC22Q5TAA0 569 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 OLFM4Q6UX06 510 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 DPP8Q6V1X1 898 aaPredicted RBP10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 SLC51AQ86UW1 340 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 VPS37DQ86XT2 251 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 MPNDQ8N594 471 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 BOLA2Q9H3K6 86 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 WWC3Q9ULE0 1092 aa10.39□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 AOX1Q06278 1338 aa10.38□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 C21orf2O43822 256 aa10.38□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 MAP4K4O95819 1239 aaPredicted RBP10.38□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 ATP5JP18859 108 aa10.38□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 CAVIN4Q5BKX8 364 aa10.38□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 RILPL2Q969X0 211 aa10.38□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 GNL3LQ9NVN8 582 aaKnown RBP10.38□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 ZNF609O15014 1411 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms