RNA–Protein interactions for RNA: ENST00000530448.5

LETM2-215, Transcript of leucine zipper and EF-hand containing transmembrane protein 2, human

TSL 2

Gene LETM2, Length 650 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETM2-215	ENST00000530448	ZNF790	Q6PG37	636 aa		12.13	□□□□□ -0.47
LETM2-215	ENST00000530448		Q6ZNB5	142 aa		12.13	□□□□□ -0.47
LETM2-215	ENST00000530448	NPM2	Q86SE8	214 aa	Known RBP	12.13	□□□□□ -0.47
LETM2-215	ENST00000530448	GPC2	Q8N158	579 aa		12.13	□□□□□ -0.47
LETM2-215	ENST00000530448	SYNE4	Q8N205	404 aa		12.13	□□□□□ -0.47
LETM2-215	ENST00000530448	KCNQ3	O43525	872 aa		12.12	□□□□□ -0.47
LETM2-215	ENST00000530448	EPS15	P42566	896 aa		12.12	□□□□□ -0.47
LETM2-215	ENST00000530448	CST9	Q5W186	159 aa		12.12	□□□□□ -0.47
LETM2-215	ENST00000530448	PACS2	Q86VP3	889 aa		12.12	□□□□□ -0.47
LETM2-215	ENST00000530448	RTKN2	Q8IZC4	609 aa		12.12	□□□□□ -0.47
LETM2-215	ENST00000530448	TEF	Q10587	303 aa		12.11	□□□□□ -0.47
LETM2-215	ENST00000530448	NBR1	Q14596	966 aa		12.11	□□□□□ -0.47
LETM2-215	ENST00000530448	SLC51A	Q86UW1	340 aa		12.11	□□□□□ -0.47
LETM2-215	ENST00000530448	IL17RE	Q8NFR9	667 aa		12.11	□□□□□ -0.47
LETM2-215	ENST00000530448	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.11	□□□□□ -0.47
LETM2-215	ENST00000530448	MAP3K7	O43318	606 aa		12.1	□□□□□ -0.47
LETM2-215	ENST00000530448	LMOD1	P29536	600 aa	Predicted RBP	12.1	□□□□□ -0.47
LETM2-215	ENST00000530448	SCNN1D	P51172	638 aa		12.1	□□□□□ -0.47
LETM2-215	ENST00000530448	JDP2	Q8WYK2	163 aa		12.1	□□□□□ -0.47
LETM2-215	ENST00000530448	FMNL2	Q96PY5	1086 aa		12.1	□□□□□ -0.47
LETM2-215	ENST00000530448	TLL2	Q9Y6L7	1015 aa		12.1	□□□□□ -0.47
LETM2-215	ENST00000530448	PRAMEF22	A3QJZ6	481 aa		12.09	□□□□□ -0.47
LETM2-215	ENST00000530448	KLRG2	A4D1S0	409 aa	Predicted RBP	12.09	□□□□□ -0.47
LETM2-215	ENST00000530448	EIF6	P56537	245 aa	Known RBP	12.09	□□□□□ -0.47
LETM2-215	ENST00000530448	DGKZ	Q13574	1117 aa		12.09	□□□□□ -0.47
LETM2-215	ENST00000530448	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.09	□□□□□ -0.47
LETM2-215	ENST00000530448	USP16	Q9Y5T5	823 aa		12.09	□□□□□ -0.47
LETM2-215	ENST00000530448	SNED1	Q8TER0	1413 aa		12.09	□□□□□ -0.47
LETM2-215	ENST00000530448	TSR1	Q2NL82	804 aa	Known RBP	12.08	□□□□□ -0.48
LETM2-215	ENST00000530448	KNSTRN	Q9Y448	316 aa		12.08	□□□□□ -0.48
LETM2-215	ENST00000530448	GNAT3	A8MTJ3	354 aa		12.07	□□□□□ -0.48
LETM2-215	ENST00000530448	CELF2	O95319	508 aa	Known RBP	12.07	□□□□□ -0.48
LETM2-215	ENST00000530448	MAP2K2	P36507	400 aa		12.07	□□□□□ -0.48
LETM2-215	ENST00000530448	SOX10	P56693	466 aa		12.07	□□□□□ -0.48
LETM2-215	ENST00000530448	PPP4C	P60510	307 aa		12.07	□□□□□ -0.48
LETM2-215	ENST00000530448	PDIA6	Q15084	440 aa		12.07	□□□□□ -0.48
LETM2-215	ENST00000530448	TPTE2	Q6XPS3	522 aa		12.07	□□□□□ -0.48
LETM2-215	ENST00000530448	PSMD1	Q99460	953 aa		12.07	□□□□□ -0.48
LETM2-215	ENST00000530448	ZNF652	Q9Y2D9	606 aa		12.07	□□□□□ -0.48
LETM2-215	ENST00000530448	ABCC12	Q96J65	1359 aa		12.06	□□□□□ -0.48
LETM2-215	ENST00000530448	TCERG1	O14776	1098 aa	Known RBP	12.06	□□□□□ -0.48
LETM2-215	ENST00000530448	DIAPH1	O60610	1272 aa	Known RBP	12.06	□□□□□ -0.48
LETM2-215	ENST00000530448	HSPA5	P11021	654 aa	Known RBP	12.06	□□□□□ -0.48
LETM2-215	ENST00000530448	ALDH1B1	P30837	517 aa		12.06	□□□□□ -0.48
LETM2-215	ENST00000530448	CIAPIN1	Q6FI81	312 aa		12.06	□□□□□ -0.48
LETM2-215	ENST00000530448	CLEC4G	Q6UXB4	293 aa		12.06	□□□□□ -0.48
LETM2-215	ENST00000530448	SAPCD2	Q86UD0	394 aa		12.06	□□□□□ -0.48
LETM2-215	ENST00000530448	LARGE2	Q8N3Y3	721 aa		12.06	□□□□□ -0.48
LETM2-215	ENST00000530448	ZIC5	Q96T25	663 aa		12.06	□□□□□ -0.48
LETM2-215	ENST00000530448	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.06	□□□□□ -0.48
LETM2-215	ENST00000530448	ZNF408	Q9H9D4	720 aa		12.06	□□□□□ -0.48
LETM2-215	ENST00000530448	BTBD11	A6QL63	1104 aa		12.05	□□□□□ -0.48
LETM2-215	ENST00000530448	CA12	O43570	354 aa		12.05	□□□□□ -0.48
LETM2-215	ENST00000530448	GTF2E1	P29083	439 aa	Predicted RBP	12.05	□□□□□ -0.48
LETM2-215	ENST00000530448	LAPTM4A	Q15012	233 aa		12.05	□□□□□ -0.48
LETM2-215	ENST00000530448	HLF	Q16534	295 aa		12.05	□□□□□ -0.48
LETM2-215	ENST00000530448	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.05	□□□□□ -0.48
LETM2-215	ENST00000530448	USP50	Q70EL3	339 aa	Predicted RBP	12.05	□□□□□ -0.48
LETM2-215	ENST00000530448	NUTM1	Q86Y26	1132 aa		12.05	□□□□□ -0.48
LETM2-215	ENST00000530448	NBPF26	B4DH59	902 aa		12.04	□□□□□ -0.48
LETM2-215	ENST00000530448	U2SURP	O15042	1029 aa	Known RBP	12.04	□□□□□ -0.48
LETM2-215	ENST00000530448	BRPF1	P55201	1214 aa	Predicted RBP	12.04	□□□□□ -0.48
LETM2-215	ENST00000530448	NBPF10	Q6P3W6	841 aa	Known RBP	12.04	□□□□□ -0.48
LETM2-215	ENST00000530448	NBPF15	Q8N660	670 aa		12.04	□□□□□ -0.48
LETM2-215	ENST00000530448	GAS2L2	Q8NHY3	880 aa		12.04	□□□□□ -0.48
LETM2-215	ENST00000530448	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.03	□□□□□ -0.48
LETM2-215	ENST00000530448	NIM1K	Q8IY84	436 aa		12.03	□□□□□ -0.48
LETM2-215	ENST00000530448	GPRC5D	Q9NZD1	345 aa		12.03	□□□□□ -0.48
LETM2-215	ENST00000530448	CEMIP	Q8WUJ3	1361 aa		12.03	□□□□□ -0.48
LETM2-215	ENST00000530448	COL3A1	P02461	1466 aa	Predicted RBP	12.02	□□□□□ -0.48
LETM2-215	ENST00000530448	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.02	□□□□□ -0.49
LETM2-215	ENST00000530448	CRY2	Q49AN0	593 aa		12.02	□□□□□ -0.49
LETM2-215	ENST00000530448	RPGR	Q92834	1020 aa	Known RBP	12.02	□□□□□ -0.49
LETM2-215	ENST00000530448	CDCA7L	Q96GN5	454 aa		12.02	□□□□□ -0.49
LETM2-215	ENST00000530448	ADARB2	Q9NS39	739 aa	Known RBP	12.02	□□□□□ -0.49
LETM2-215	ENST00000530448	PPIP5K2	O43314	1243 aa		12.01	□□□□□ -0.49
LETM2-215	ENST00000530448	SNRPA1	P09661	255 aa	Known RBP	12.01	□□□□□ -0.49
LETM2-215	ENST00000530448	GMPS	P49915	693 aa	Predicted RBP	12.01	□□□□□ -0.49
LETM2-215	ENST00000530448	PRSS12	P56730	875 aa		12.01	□□□□□ -0.49
LETM2-215	ENST00000530448	CNGB1	Q14028	1251 aa	Predicted RBP	12.01	□□□□□ -0.49
LETM2-215	ENST00000530448	AOC3	Q16853	763 aa		12.01	□□□□□ -0.49
LETM2-215	ENST00000530448	CC2D1B	Q5T0F9	858 aa	Known RBP	12.01	□□□□□ -0.49
LETM2-215	ENST00000530448	CC2D2B	Q6DHV5	1058 aa		12.01	□□□□□ -0.49
LETM2-215	ENST00000530448	DLK2	Q6UY11	383 aa		12.01	□□□□□ -0.49
LETM2-215	ENST00000530448	SAMD7	Q7Z3H4	446 aa		12.01	□□□□□ -0.49
LETM2-215	ENST00000530448	NGEF	Q8N5V2	710 aa		12.01	□□□□□ -0.49
LETM2-215	ENST00000530448	NUP98	P52948	1817 aa		12.01	□□□□□ -0.49
LETM2-215	ENST00000530448	NPC1L1	Q9UHC9	1359 aa		12.01	□□□□□ -0.49
LETM2-215	ENST00000530448	SHTN1	A0MZ66	631 aa		12	□□□□□ -0.49
LETM2-215	ENST00000530448	PPEF1	O14829	653 aa	Predicted RBP	12	□□□□□ -0.49
LETM2-215	ENST00000530448	CXCL9	Q07325	125 aa		12	□□□□□ -0.49
LETM2-215	ENST00000530448	HHIPL1	Q96JK4	782 aa		12	□□□□□ -0.49
LETM2-215	ENST00000530448	PHACTR3	Q96KR7	559 aa		12	□□□□□ -0.49
LETM2-215	ENST00000530448	SMAP	O00193	183 aa		11.99	□□□□□ -0.49
LETM2-215	ENST00000530448	GPT	P24298	496 aa		11.99	□□□□□ -0.49
LETM2-215	ENST00000530448	HOXA10	P31260	410 aa	Predicted RBP	11.99	□□□□□ -0.49
LETM2-215	ENST00000530448	HIRA	P54198	1017 aa	Predicted RBP	11.99	□□□□□ -0.49
LETM2-215	ENST00000530448	HUNK	P57058	714 aa		11.99	□□□□□ -0.49
LETM2-215	ENST00000530448	NOG	Q13253	232 aa		11.99	□□□□□ -0.49
LETM2-215	ENST00000530448	TJAP1	Q5JTD0	557 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms