RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 SRGAP3O43295 1099 aa13.71□□□□□ -0.21
CAPN1-218ENST00000530442 GPSM2P81274 684 aa13.71□□□□□ -0.21
CAPN1-218ENST00000530442 FKBP4Q02790 459 aaKnown RBP eCLIP13.71□□□□□ -0.21
CAPN1-218ENST00000530442 PTPN12Q05209 780 aaKnown RBP13.71□□□□□ -0.21
CAPN1-218ENST00000530442 TAF7LQ5H9L4 462 aa13.71□□□□□ -0.21
CAPN1-218ENST00000530442 CEP85Q6P2H3 762 aa13.71□□□□□ -0.21
CAPN1-218ENST00000530442 RTKN2Q8IZC4 609 aa13.71□□□□□ -0.21
CAPN1-218ENST00000530442 PSMD1Q99460 953 aa13.71□□□□□ -0.21
CAPN1-218ENST00000530442 MPHOSPH8Q99549 860 aa13.71□□□□□ -0.21
CAPN1-218ENST00000530442 MINPP1Q9UNW1 487 aa13.71□□□□□ -0.21
CAPN1-218ENST00000530442 DPP8Q6V1X1 898 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-218ENST00000530442 MPNDQ8N594 471 aa13.7□□□□□ -0.22
CAPN1-218ENST00000530442 RTFDC1Q9BY42 306 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-218ENST00000530442 PUS3Q9BZE2 481 aaKnown RBP13.7□□□□□ -0.22
CAPN1-218ENST00000530442 PA2G4Q9UQ80 394 aaKnown RBP13.7□□□□□ -0.22
CAPN1-218ENST00000530442 XDHP47989 1333 aa13.69□□□□□ -0.22
CAPN1-218ENST00000530442 CHRNDQ07001 517 aa13.69□□□□□ -0.22
CAPN1-218ENST00000530442 POLA2Q14181 598 aa13.69□□□□□ -0.22
CAPN1-218ENST00000530442 GRIPAP1Q4V328 841 aa13.69□□□□□ -0.22
CAPN1-218ENST00000530442 LRRC24Q50LG9 513 aa13.69□□□□□ -0.22
CAPN1-218ENST00000530442 LDHAL6AQ6ZMR3 332 aa13.69□□□□□ -0.22
CAPN1-218ENST00000530442 TMX4Q9H1E5 349 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-218ENST00000530442 CHMP4BQ9H444 224 aaKnown RBP13.69□□□□□ -0.22
CAPN1-218ENST00000530442 ZNF277Q9NRM2 450 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-218ENST00000530442 CNNM1Q9NRU3 951 aa13.69□□□□□ -0.22
CAPN1-218ENST00000530442 PODXL2Q9NZ53 605 aa13.69□□□□□ -0.22
CAPN1-218ENST00000530442 NSFL1CQ9UNZ2 370 aaKnown RBP13.69□□□□□ -0.22
CAPN1-218ENST00000530442 ZNF646O15015 1829 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-218ENST00000530442 PSME4Q14997 1843 aa13.69□□□□□ -0.22
CAPN1-218ENST00000530442 ATP8B2P98198 1209 aa13.68□□□□□ -0.22
CAPN1-218ENST00000530442 TBC1D16Q8TBP0 767 aa13.68□□□□□ -0.22
CAPN1-218ENST00000530442 SSH3Q8TE77 659 aa13.68□□□□□ -0.22
CAPN1-218ENST00000530442 GPR101Q96P66 508 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-218ENST00000530442 SIL1Q9H173 461 aa13.68□□□□□ -0.22
CAPN1-218ENST00000530442 COPRSQ9NQ92 184 aa13.68□□□□□ -0.22
CAPN1-218ENST00000530442 POLLQ9UGP5 575 aa13.68□□□□□ -0.22
CAPN1-218ENST00000530442 RIPOR2Q9Y4F9 1068 aa13.68□□□□□ -0.22
CAPN1-218ENST00000530442 EYA2O00167 538 aa13.67□□□□□ -0.22
CAPN1-218ENST00000530442 UFL1O94874 794 aa13.67□□□□□ -0.22
CAPN1-218ENST00000530442 LMNB1P20700 586 aa13.67□□□□□ -0.22
CAPN1-218ENST00000530442 IARSP41252 1262 aaKnown RBP13.67□□□□□ -0.22
CAPN1-218ENST00000530442 ATG9AQ7Z3C6 839 aa13.67□□□□□ -0.22
CAPN1-218ENST00000530442 SIRT2Q8IXJ6 389 aa13.67□□□□□ -0.22
CAPN1-218ENST00000530442 ANKIB1Q9P2G1 1089 aa13.67□□□□□ -0.22
CAPN1-218ENST00000530442 SCN9AQ15858 1988 aa13.67□□□□□ -0.22
CAPN1-218ENST00000530442 MROH5Q6ZUA9 1318 aa13.66□□□□□ -0.22
CAPN1-218ENST00000530442 WTIPA6NIX2 430 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-218ENST00000530442 TAF5LO75529 589 aa13.66□□□□□ -0.22
CAPN1-218ENST00000530442 CIAO1O76071 339 aa13.66□□□□□ -0.22
CAPN1-218ENST00000530442 IRX6P78412 446 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-218ENST00000530442 C9orf131Q5VYM1 1079 aa13.66□□□□□ -0.22
CAPN1-218ENST00000530442 VGLL2Q8N8G2 317 aa13.66□□□□□ -0.22
CAPN1-218ENST00000530442 SUPT20HQ8NEM7 779 aa13.66□□□□□ -0.22
CAPN1-218ENST00000530442 HELBQ8NG08 1087 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-218ENST00000530442 ANKRD2Q9GZV1 360 aa13.66□□□□□ -0.22
CAPN1-218ENST00000530442 RNF181Q9P0P0 153 aa13.66□□□□□ -0.22
CAPN1-218ENST00000530442 GGA1Q9UJY5 639 aa13.66□□□□□ -0.22
CAPN1-218ENST00000530442 MED23Q9ULK4 1368 aa13.66□□□□□ -0.22
CAPN1-218ENST00000530442 IRS2Q9Y4H2 1338 aa13.65□□□□□ -0.22
CAPN1-218ENST00000530442 C6orf229H3BNL8 230 aa13.65□□□□□ -0.22
CAPN1-218ENST00000530442 SNAP23O00161 211 aa13.65□□□□□ -0.22
CAPN1-218ENST00000530442 PPIP5K2O43314 1243 aa13.65□□□□□ -0.22
CAPN1-218ENST00000530442 CENPBP07199 599 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-218ENST00000530442 ATP2B4P23634 1241 aa13.65□□□□□ -0.22
CAPN1-218ENST00000530442 KIAA2012Q0VF49 1180 aa13.65□□□□□ -0.22
CAPN1-218ENST00000530442 AOC3Q16853 763 aa13.65□□□□□ -0.22
CAPN1-218ENST00000530442 METTL24Q5JXM2 366 aa13.65□□□□□ -0.22
CAPN1-218ENST00000530442 RPAP2Q8IXW5 612 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-218ENST00000530442 EXOC6Q8TAG9 804 aa13.65□□□□□ -0.22
CAPN1-218ENST00000530442 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
CAPN1-218ENST00000530442 ZNF804BA4D1E1 1349 aa13.64□□□□□ -0.23
CAPN1-218ENST00000530442 MYH13Q9UKX3 1938 aa13.64□□□□□ -0.23
CAPN1-218ENST00000530442 KLRK1P26718 216 aa13.64□□□□□ -0.23
CAPN1-218ENST00000530442 LEMD3Q9Y2U8 911 aa13.64□□□□□ -0.23
CAPN1-218ENST00000530442 ZNF609O15014 1411 aa13.64□□□□□ -0.23
CAPN1-218ENST00000530442 IL15P40933 162 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-218ENST00000530442 WASHC4Q2M389 1173 aa13.63□□□□□ -0.23
CAPN1-218ENST00000530442 LARGE2Q8N3Y3 721 aa13.63□□□□□ -0.23
CAPN1-218ENST00000530442 EYA3Q99504 573 aa13.63□□□□□ -0.23
CAPN1-218ENST00000530442 VPS33BQ9H267 617 aa13.63□□□□□ -0.23
CAPN1-218ENST00000530442 PCDHB15Q9Y5E8 787 aa13.63□□□□□ -0.23
CAPN1-218ENST00000530442 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-218ENST00000530442 RIMBP2O15034 1052 aa13.62□□□□□ -0.23
CAPN1-218ENST00000530442 PDE8BO95263 885 aa13.62□□□□□ -0.23
CAPN1-218ENST00000530442 KCNJ4P48050 445 aa13.62□□□□□ -0.23
CAPN1-218ENST00000530442 TXNRD3Q86VQ6 643 aa13.62□□□□□ -0.23
CAPN1-218ENST00000530442 NOP58Q9Y2X3 529 aaKnown RBP13.62□□□□□ -0.23
CAPN1-218ENST00000530442 ZC3H4Q9UPT8 1303 aaKnown RBP13.62□□□□□ -0.23
CAPN1-218ENST00000530442 HMMRO75330 724 aa13.61□□□□□ -0.23
CAPN1-218ENST00000530442 SURF6O75683 361 aaKnown RBP13.61□□□□□ -0.23
CAPN1-218ENST00000530442 SASH1O94885 1247 aa13.61□□□□□ -0.23
CAPN1-218ENST00000530442 FGFR2P21802 821 aa13.61□□□□□ -0.23
CAPN1-218ENST00000530442 UBE4AQ14139 1066 aa13.61□□□□□ -0.23
CAPN1-218ENST00000530442 EXOC6BQ9Y2D4 811 aa13.61□□□□□ -0.23
CAPN1-218ENST00000530442 ZNF541Q9H0D2 1346 aa13.61□□□□□ -0.23
CAPN1-218ENST00000530442 YDJCA8MPS7 323 aa13.6□□□□□ -0.23
CAPN1-218ENST00000530442 FZD9O00144 591 aa13.6□□□□□ -0.23
CAPN1-218ENST00000530442 TFCP2Q12800 502 aa13.6□□□□□ -0.23
CAPN1-218ENST00000530442 G3BP1Q13283 466 aaKnown RBP eCLIP13.6□□□□□ -0.23
CAPN1-218ENST00000530442 AAMPQ13685 434 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms